RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PPP1R18Q6NYC8 613 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 NOP9Q86U38 636 aaKnown RBP10.87□□□□□ -0.67
PTPRA-203ENST00000356147 CERS5Q8N5B7 392 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 PARVGQ9HBI0 331 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 SLCO1B3Q9NPD5 702 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 VAV3Q9UKW4 847 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 ZBTB21Q9ULJ3 1066 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 CFAP73A6NFT4 308 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 O00370 1275 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 THAP12O43422 761 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 SLITRK3O94933 977 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 ECEL1O95672 775 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 PDHA1P08559 390 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 CTNNA2P26232 953 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 DNAJC3Q13217 504 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 MTM1Q13496 603 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 SGO2Q562F6 1265 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 ECHDC2Q86YB7 292 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 DHX38Q92620 1227 aaKnown RBP10.87□□□□□ -0.67
PTPRA-203ENST00000356147 ART4Q93070 314 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 CBWD1Q9BRT8 395 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 PASKQ96RG2 1323 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 KDM4FA0A1W2PPD8 638 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 TMEM150BA6NC51 233 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 PODXLO00592 558 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 EYA4O95677 639 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 OAS1P00973 400 aaKnown RBP10.86□□□□□ -0.67
PTPRA-203ENST00000356147 FOXN2P32314 431 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 ABL2P42684 1182 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 ITGA8P53708 1063 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 BFSP1Q12934 665 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 MIGA2Q7L4E1 593 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 ZNF564Q8TBZ8 553 aaPredicted RBP10.86□□□□□ -0.67
PTPRA-203ENST00000356147 UTP4Q969X6 686 aaKnown RBP10.86□□□□□ -0.67
PTPRA-203ENST00000356147 CCDC127Q96BQ5 260 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 ZNF653Q96CK0 615 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 PCYOX1Q9UHG3 505 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 HAO1Q9UJM8 370 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 RPS6KA4O75676 772 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 SLMAPQ14BN4 828 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 TMED2Q15363 201 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 SIX1Q15475 284 aaPredicted RBP10.86□□□□□ -0.67
PTPRA-203ENST00000356147 BMT2Q1RMZ1 405 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 GALNTL6Q49A17 601 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 FAM182AQ5T1J6 154 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 ZNF720Q7Z2F6 126 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 RHOT2Q8IXI1 618 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 TBC1D16Q8TBP0 767 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 WDR18Q9BV38 432 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 TAOK3Q9H2K8 898 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 CNOT7Q9UIV1 285 aaKnown RBP10.86□□□□□ -0.67
PTPRA-203ENST00000356147 R3HDM2Q9Y2K5 976 aaKnown RBP10.86□□□□□ -0.67
PTPRA-203ENST00000356147 ARL2BPQ9Y2Y0 163 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 FRMPD4Q14CM0 1322 aa10.86□□□□□ -0.67
PTPRA-203ENST00000356147 GSTTP1A0A1W2PQM5 241 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 GTPBP10A4D1E9 387 aaKnown RBP10.85□□□□□ -0.67
PTPRA-203ENST00000356147 ADCY8P40145 1251 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 ERFP50548 548 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 DRG2P55039 364 aaKnown RBP10.85□□□□□ -0.67
PTPRA-203ENST00000356147 TAF11Q15544 211 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 CAPRIN2Q6IMN6 1127 aaKnown RBP10.85□□□□□ -0.67
PTPRA-203ENST00000356147 CRELD2Q6UXH1 353 aaPredicted RBP10.85□□□□□ -0.67
PTPRA-203ENST00000356147 C1orf186Q6ZWK4 172 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 FMNL3Q8IVF7 1028 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 LMO3Q8TAP4 145 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 ERP27Q96DN0 273 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 PLCD4Q9BRC7 762 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 SLC5A4Q9NY91 659 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 MTUS1Q9ULD2 1270 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 MAST2Q6P0Q8 1798 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 CYP3A7-CYP3A51PA0A087WV96 503 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 ATP2A2P16615 1042 aaKnown RBP10.85□□□□□ -0.67
PTPRA-203ENST00000356147 CYP3A7P24462 503 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 SESN3P58005 492 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 PPP2R5EQ16537 467 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 FBXO11Q86XK2 927 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 VSIG1Q86XK7 387 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 PLEKHO2Q8TD55 490 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 SLC5A5Q92911 643 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 FIZ1Q96SL8 496 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 KLHL11Q9NVR0 708 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 CCNL1Q9UK58 526 aaPredicted RBP10.85□□□□□ -0.67
PTPRA-203ENST00000356147 NAALADL1Q9UQQ1 740 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 DIS3Q9Y2L1 958 aaKnown RBP10.85□□□□□ -0.67
PTPRA-203ENST00000356147 GAKO14976 1311 aa10.85□□□□□ -0.67
PTPRA-203ENST00000356147 F5H6K3 240 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 K7ENM7 598 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 ANXA13P27216 316 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 LACTBP83111 547 aaPredicted RBP10.84□□□□□ -0.67
PTPRA-203ENST00000356147 RIPK1Q13546 671 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 CDC42EP5Q6NZY7 148 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 CKAP2Q8WWK9 683 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 ZBTB10Q96DT7 871 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 AMNQ9BXJ7 453 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 PITPNM3Q9BZ71 974 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 STMN4Q9H169 189 aaPredicted RBP10.84□□□□□ -0.67
PTPRA-203ENST00000356147 MYLK2Q9H1R3 596 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 CCDC134Q9H6E4 229 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 OLFML3Q9NRN5 406 aa10.84□□□□□ -0.67
PTPRA-203ENST00000356147 KLHL14Q9P2G3 628 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms