RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 BICD1Q96G01 975 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 ETNK1Q9HBU6 452 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 GDF3Q9NR23 364 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 METTL5Q9NRN9 209 aaKnown RBP10.06□□□□□ -0.8
SMG6-202ENST00000354901 TYW1Q9NV66 732 aaKnown RBP10.06□□□□□ -0.8
SMG6-202ENST00000354901 FGFR1OP2Q9NVK5 253 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 STK32BQ9NY57 414 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 NYAP2Q9P242 653 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 ZBTB21Q9ULJ3 1066 aa10.06□□□□□ -0.8
SMG6-202ENST00000354901 SCAF8Q9UPN6 1271 aaKnown RBP10.06□□□□□ -0.8
SMG6-202ENST00000354901 NOC2LQ9Y3T9 749 aaKnown RBP10.06□□□□□ -0.8
SMG6-202ENST00000354901 DDX3XO00571 662 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMG6-202ENST00000354901 PDXKO00764 312 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 MARSP56192 900 aaKnown RBP10.05□□□□□ -0.8
SMG6-202ENST00000354901 KLC1Q07866 573 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 AP3B2Q13367 1082 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 ZNF211Q13398 564 aaPredicted RBP10.05□□□□□ -0.8
SMG6-202ENST00000354901 RCN2Q14257 317 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 EPHA7Q15375 998 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 UAP1Q16222 522 aaPredicted RBP10.05□□□□□ -0.8
SMG6-202ENST00000354901 ZNF449Q6P9G9 518 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 VPS36Q86VN1 386 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 ACER1Q8TDN7 264 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 WHAMMQ8TF30 809 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 LRRC45Q96CN5 670 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 CSRNP1Q96S65 589 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 GLT8D2Q9H1C3 349 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 NEUROG2Q9H2A3 272 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 PCIF1Q9H4Z3 704 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 INTUQ9ULD6 942 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 TRAF3IP3Q9Y228 551 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 CFAP73A6NFT4 308 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 TMEM110-MUSTN1A8MSY1 372 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 TGFB1I1O43294 461 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 UBTFL6P0CB48 400 aaPredicted RBP10.05□□□□□ -0.8
SMG6-202ENST00000354901 GALCP54803 685 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 FKBP1AP62942 108 aaKnown RBP10.05□□□□□ -0.8
SMG6-202ENST00000354901 MTA1Q13330 715 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 RBM26Q5T8P6 1007 aaKnown RBP10.05□□□□□ -0.8
SMG6-202ENST00000354901 CC2D2BQ6DHV5 1058 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 CEP128Q6ZU80 1094 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 CCNJLQ8IV13 435 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 TPCN2Q8NHX9 752 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 SPIRE2Q8WWL2 714 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMG6-202ENST00000354901 GGA2Q9UJY4 613 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 PRR12Q9ULL5 1215 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 CYP3A7-CYP3A51PA0A087WV96 503 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 A6NHS1 94 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 TISP43B9A030 160 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 ZCCHC18P0CG32 403 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 CYP3A7P24462 503 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 GBP1P32455 592 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 STAT1P42224 750 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 DRAP1Q14919 205 aaPredicted RBP10.05□□□□□ -0.8
SMG6-202ENST00000354901 TMEM179Q6ZVK1 233 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 PLEKHG4BQ96PX9 1271 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 TMEM237Q96Q45 408 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 AZI2Q9H6S1 392 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 KCNK9Q9NPC2 374 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 RNF14Q9UBS8 474 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 BLOC1S6Q9UL45 172 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 BZW2Q9Y6E2 419 aaKnown RBP10.05□□□□□ -0.8
SMG6-202ENST00000354901 ARFGEF1Q9Y6D6 1849 aa10.05□□□□□ -0.8
SMG6-202ENST00000354901 FOCADQ5VW36 1801 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 PGRMC1O00264 195 aaKnown RBP10.04□□□□□ -0.8
SMG6-202ENST00000354901 TTI1O43156 1089 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 GHRP10912 638 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 SP100P23497 879 aaPredicted RBP10.04□□□□□ -0.8
SMG6-202ENST00000354901 PAX3P23760 479 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 SREBF1P36956 1147 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 IFI16Q16666 785 aaKnown RBP10.04□□□□□ -0.8
SMG6-202ENST00000354901 AOC3Q16853 763 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 TSNAXIP1Q2TAA8 658 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 ODR4Q5SWX8 454 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 FAM178BQ8IXR5 827 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 ZDHHC15Q96MV8 337 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 NUDCD1Q96RS6 583 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 TRIM51Q9BSJ1 452 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 WDR18Q9BV38 432 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 VCXQ9H320 206 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 SIX2Q9NPC8 291 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 DNAJC12Q9UKB3 198 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 VAV3Q9UKW4 847 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 NR2E1Q9Y466 385 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 ZSCAN9O15535 394 aaPredicted RBP10.04□□□□□ -0.8
SMG6-202ENST00000354901 ECE2O60344 883 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 GAS7O60861 476 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 MKRN4PQ13434 485 aaPredicted RBP10.04□□□□□ -0.8
SMG6-202ENST00000354901 SLC15A2Q16348 729 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 CBWD6Q4V339 395 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 CBWD3Q5JTY5 395 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 CBWD5Q5RIA9 395 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 OLFML2BQ68BL8 750 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 CCDC25Q86WR0 208 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 PALB2Q86YC2 1186 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 PHC3Q8NDX5 983 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 CNKSR1Q969H4 720 aa10.04□□□□□ -0.8
SMG6-202ENST00000354901 PRMT6Q96LA8 375 aaPredicted RBP10.04□□□□□ -0.8
SMG6-202ENST00000354901 IFT74Q96LB3 600 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms