RNA–Protein interactions for RNA: ENST00000354361.3

SYF2-202, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2 BASIC

Gene SYF2, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-202ENST00000354361 APPBP2Q92624 585 aa4.88□□□□□ -1.63
SYF2-202ENST00000354361 CCDC140Q96MF4 163 aa4.88□□□□□ -1.63
SYF2-202ENST00000354361 TMX4Q9H1E5 349 aaPredicted RBP4.88□□□□□ -1.63
SYF2-202ENST00000354361 EPB41L1Q9H4G0 881 aa4.88□□□□□ -1.63
SYF2-202ENST00000354361 ASAP1Q9ULH1 1129 aa4.88□□□□□ -1.63
SYF2-202ENST00000354361 SPATA31A5Q5VU36 1347 aa4.88□□□□□ -1.63
SYF2-202ENST00000354361 SPATA31A7Q8IWB4 1347 aa4.88□□□□□ -1.63
SYF2-202ENST00000354361 XIRP1Q702N8 1843 aaKnown RBP4.88□□□□□ -1.63
SYF2-202ENST00000354361 ROBO1Q9Y6N7 1651 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 GOLIM4O00461 696 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 SLC27A2O14975 620 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 FOXS1O43638 330 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 STX6O43752 255 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 KLHL18O94889 574 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 RPS6KB1P23443 525 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 AK2P54819 239 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 GFRA1P56159 465 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 KRT85P78386 507 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 SART3Q15020 963 aaKnown RBP4.87□□□□□ -1.63
SYF2-202ENST00000354361 PRKD1Q15139 912 aaPredicted RBP4.87□□□□□ -1.63
SYF2-202ENST00000354361 HS1BP3Q53T59 392 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 TSHZ3Q63HK5 1081 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 MRM1Q6IN84 353 aaKnown RBP4.87□□□□□ -1.63
SYF2-202ENST00000354361 DENND5AQ6IQ26 1287 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 TCTN3Q6NUS6 607 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 PROSER1Q86XN7 944 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 ANKRD18AQ8IVF6 992 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 AMOTL1Q8IY63 956 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 ZGPATQ8N5A5 531 aaKnown RBP4.87□□□□□ -1.63
SYF2-202ENST00000354361 NCOA7Q8NI08 942 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 PHOSPHO1Q8TCT1 267 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 MICAL1Q8TDZ2 1067 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 FAM89AQ96GI7 184 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 CCDC34Q96HJ3 373 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 KAZALD1Q96I82 304 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 LRRC37BQ96QE4 947 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 ADOQ96SZ5 270 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 ANKRD2Q9GZV1 360 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 SEC61A2Q9H9S3 476 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 DLL4Q9NR61 685 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 HSPBP1Q9NZL4 362 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 CARMIL3Q8ND23 1372 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 RPAP1Q9BWH6 1393 aaPredicted RBP4.87□□□□□ -1.63
SYF2-202ENST00000354361 DISP2A7MBM2 1401 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 KCPQ6ZWJ8 1503 aa4.87□□□□□ -1.63
SYF2-202ENST00000354361 PAPPAQ13219 1627 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 PLCH1Q4KWH8 1693 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 PHLPP1O60346 1717 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 CCDC196A0A1B0GTZ2 297 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 AGRPO00253 132 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 CPLX1O14810 134 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 APPP05067 770 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 SLC3A2P08195 630 aaKnown RBP4.86□□□□□ -1.63
SYF2-202ENST00000354361 PCP11498 1178 aaKnown RBP4.86□□□□□ -1.63
SYF2-202ENST00000354361 XBP1P17861 261 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 ERCC5P28715 1186 aaPredicted RBP4.86□□□□□ -1.63
SYF2-202ENST00000354361 MCM5P33992 734 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 EIF5P55010 431 aaKnown RBP4.86□□□□□ -1.63
SYF2-202ENST00000354361 TIMM10P62072 90 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 UBE2HP62256 183 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 FOXE3Q13461 319 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 TRIM29Q14134 588 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 PPP2R5BQ15173 497 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 UBE3CQ15386 1083 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 ZRSR1Q15695 479 aaKnown RBP4.86□□□□□ -1.63
SYF2-202ENST00000354361 SPTY2D1Q68D10 685 aaPredicted RBP4.86□□□□□ -1.63
SYF2-202ENST00000354361 VASNQ6EMK4 673 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 RNF207Q6ZRF8 634 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 Q6ZUG5 572 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 EEPD1Q7L9B9 569 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 GPR155Q7Z3F1 870 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 ZNF34Q8IZ26 560 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 DTX3Q8N9I9 347 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 TTLL11Q8NHH1 800 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 WASF1Q92558 559 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 ZNF274Q96GC6 653 aaPredicted RBP4.86□□□□□ -1.63
SYF2-202ENST00000354361 ZNF396Q96N95 335 aaPredicted RBP4.86□□□□□ -1.63
SYF2-202ENST00000354361 LMF1Q96S06 567 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.86□□□□□ -1.634e-6■■□□□ 13.3
SYF2-202ENST00000354361 NOL10Q9BSC4 688 aaKnown RBP4.86□□□□□ -1.63
SYF2-202ENST00000354361 JAM3Q9BX67 310 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 UPF3BQ9BZI7 483 aaKnown RBP4.86□□□□□ -1.63
SYF2-202ENST00000354361 KRT23Q9C075 422 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 SMOC1Q9H4F8 434 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 RNF41Q9H4P4 317 aaPredicted RBP4.86□□□□□ -1.63
SYF2-202ENST00000354361 ASH2LQ9UBL3 628 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 PRKAG3Q9UGI9 489 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 DBNLQ9UJU6 430 aaKnown RBP4.86□□□□□ -1.63
SYF2-202ENST00000354361 NIP7Q9Y221 180 aaKnown RBP eCLIP4.86□□□□□ -1.63
SYF2-202ENST00000354361 SLC4A7Q9Y6M7 1214 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 WDR19Q8NEZ3 1342 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 C5P01031 1676 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 ABCA3Q99758 1704 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 UBR2Q8IWV8 1755 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 ARFGEF2Q9Y6D5 1785 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 AFDNP55196 1824 aaKnown RBP4.86□□□□□ -1.63
SYF2-202ENST00000354361 SPEF2Q9C093 1822 aa4.86□□□□□ -1.63
SYF2-202ENST00000354361 MAFKO60675 156 aa4.85□□□□□ -1.63
SYF2-202ENST00000354361 TAF5LO75529 589 aa4.85□□□□□ -1.63
SYF2-202ENST00000354361 GJB6O95452 261 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms