RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 TTC19Q6DKK2 380 aaPredicted RBP23.83■■□□□ 1.41
UPF3A-201ENST00000351487 OTUD6AQ7L8S5 288 aa23.83■■□□□ 1.41
UPF3A-201ENST00000351487 JDP2Q8WYK2 163 aa23.83■■□□□ 1.41
UPF3A-201ENST00000351487 BSNDQ8WZ55 320 aa23.83■■□□□ 1.41
UPF3A-201ENST00000351487 BIRC3Q13489 604 aa23.83■■□□□ 1.4
UPF3A-201ENST00000351487 SLC39A4Q6P5W5 647 aa23.83■■□□□ 1.4
UPF3A-201ENST00000351487 RUFY4Q6ZNE9 571 aa23.83■■□□□ 1.4
UPF3A-201ENST00000351487 SLC47A2Q86VL8 602 aa23.83■■□□□ 1.4
UPF3A-201ENST00000351487 KRT35Q92764 455 aa23.83■■□□□ 1.4
UPF3A-201ENST00000351487 ERP44Q9BS26 406 aa23.83■■□□□ 1.4
UPF3A-201ENST00000351487 TXLNGYQ9BZA5 131 aa23.83■■□□□ 1.4
UPF3A-201ENST00000351487 DPH5Q9H2P9 285 aa23.83■■□□□ 1.4
UPF3A-201ENST00000351487 RIPK3Q9Y572 518 aa23.83■■□□□ 1.4
UPF3A-201ENST00000351487 TRIM66O15016 1216 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 PPFIA2O75334 1257 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 STBD1O95210 358 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 GGPS1O95749 300 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 NR3C2P08235 984 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 TRMT1LQ7Z2T5 733 aaKnown RBP23.82■■□□□ 1.4
UPF3A-201ENST00000351487 USP37Q86T82 979 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 REPS2Q8NFH8 660 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 CD101Q93033 1021 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 ATP6V0A1Q93050 837 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 WNK4Q96J92 1243 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 FMO2Q99518 471 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 WNT8AQ9H1J5 351 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 TAOK3Q9H2K8 898 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 DOCK5Q9H7D0 1870 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 FAM170AA1A519 330 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 EBAG9O00559 213 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 ZNF862O60290 1169 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 DKC1O60832 514 aaKnown RBP eCLIP23.82■■□□□ 1.4
UPF3A-201ENST00000351487 PHF2O75151 1096 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 CYP1A2P05177 515 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 CYP11B1P15538 503 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 LSP1P33241 339 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 PEX5P50542 639 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 DRG2P55039 364 aaKnown RBP23.82■■□□□ 1.4
UPF3A-201ENST00000351487 RTP1P59025 263 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 EFCAB13Q8IY85 973 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 FBXL13Q8NEE6 735 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 UBLCP1Q8WVY7 318 aaPredicted RBP23.82■■□□□ 1.4
UPF3A-201ENST00000351487 CCDC127Q96BQ5 260 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 NT5C1BQ96P26 610 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 RASSF4Q9H2L5 321 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 GTF3C4Q9UKN8 822 aa23.82■■□□□ 1.4
UPF3A-201ENST00000351487 BRCA1P38398 1863 aaKnown RBP23.81■■□□□ 1.4
UPF3A-201ENST00000351487 SRRM3A6NNA2 597 aaPredicted RBP23.81■■□□□ 1.4
UPF3A-201ENST00000351487 MYO1FO00160 1098 aa23.81■■□□□ 1.4
UPF3A-201ENST00000351487 MMEP08473 750 aa23.81■■□□□ 1.4
UPF3A-201ENST00000351487 KCNA2P16389 499 aa23.81■■□□□ 1.4
UPF3A-201ENST00000351487 COMTP21964 271 aa23.81■■□□□ 1.4
UPF3A-201ENST00000351487 MARCKSL1P49006 195 aa23.81■■□□□ 1.4
UPF3A-201ENST00000351487 OAZ1P54368 228 aa23.81■■□□□ 1.4
UPF3A-201ENST00000351487 BACE1P56817 501 aa23.81■■□□□ 1.4
UPF3A-201ENST00000351487 CDR2Q01850 454 aa23.81■■□□□ 1.4
UPF3A-201ENST00000351487 ARFGAP2Q8N6H7 521 aa23.81■■□□□ 1.4
UPF3A-201ENST00000351487 OR2W6PQ8NHA6 318 aa23.81■■□□□ 1.4
UPF3A-201ENST00000351487 FAM107BQ9H098 131 aa23.81■■□□□ 1.4
UPF3A-201ENST00000351487 ZDHHC18Q9NUE0 388 aa23.81■■□□□ 1.4
UPF3A-201ENST00000351487 PIM2Q9P1W9 311 aa23.81■■□□□ 1.4
UPF3A-201ENST00000351487 CHRNA3P32297 505 aa23.8■■□□□ 1.4
UPF3A-201ENST00000351487 CYP24A1Q07973 514 aa23.8■■□□□ 1.4
UPF3A-201ENST00000351487 DHX9Q08211 1270 aaKnown RBP23.8■■□□□ 1.4
UPF3A-201ENST00000351487 JAMLQ86YT9 394 aa23.8■■□□□ 1.4
UPF3A-201ENST00000351487 C10orf67Q8IYJ2 551 aa23.8■■□□□ 1.4
UPF3A-201ENST00000351487 CEP170P1Q96L14 293 aa23.8■■□□□ 1.4
UPF3A-201ENST00000351487 PDLIM7Q9NR12 457 aa23.8■■□□□ 1.4
UPF3A-201ENST00000351487 RAB20Q9NX57 234 aa23.8■■□□□ 1.4
UPF3A-201ENST00000351487 GABBR1Q9UBS5 961 aa23.8■■□□□ 1.4
UPF3A-201ENST00000351487 TRPC6Q9Y210 931 aa23.8■■□□□ 1.4
UPF3A-201ENST00000351487 CTNNA2P26232 953 aa23.8■■□□□ 1.4
UPF3A-201ENST00000351487 MDH1P40925 334 aaKnown RBP23.8■■□□□ 1.4
UPF3A-201ENST00000351487 PDE6CP51160 858 aa23.8■■□□□ 1.4
UPF3A-201ENST00000351487 AGBL2Q5U5Z8 902 aa23.8■■□□□ 1.4
UPF3A-201ENST00000351487 ADAT2Q7Z6V5 191 aaKnown RBP23.8■■□□□ 1.4
UPF3A-201ENST00000351487 TAS1R2Q8TE23 839 aa23.8■■□□□ 1.4
UPF3A-201ENST00000351487 SLC16A10Q8TF71 515 aa23.8■■□□□ 1.4
UPF3A-201ENST00000351487 UVRAGQ9P2Y5 699 aa23.8■■□□□ 1.4
UPF3A-201ENST00000351487 PCYOX1Q9UHG3 505 aa23.8■■□□□ 1.4
UPF3A-201ENST00000351487 RASAL2Q9UJF2 1139 aa23.8■■□□□ 1.4
UPF3A-201ENST00000351487 NFASCO94856 1347 aa23.79■■□□□ 1.4
UPF3A-201ENST00000351487 ADGRA3Q8IWK6 1321 aa23.79■■□□□ 1.4
UPF3A-201ENST00000351487 COPB2P35606 906 aa23.79■■□□□ 1.4
UPF3A-201ENST00000351487 GUCY1A3Q02108 690 aa23.79■■□□□ 1.4
UPF3A-201ENST00000351487 MESDQ14696 234 aa23.79■■□□□ 1.4
UPF3A-201ENST00000351487 SCYL3Q8IZE3 742 aa23.79■■□□□ 1.4
UPF3A-201ENST00000351487 PRELID2Q8N945 189 aa23.79■■□□□ 1.4
UPF3A-201ENST00000351487 MCPH1Q8NEM0 835 aa23.79■■□□□ 1.4
UPF3A-201ENST00000351487 ZNF564Q8TBZ8 553 aaPredicted RBP23.79■■□□□ 1.4
UPF3A-201ENST00000351487 DDX1Q92499 740 aaKnown RBP23.79■■□□□ 1.4
UPF3A-201ENST00000351487 EPN3Q9H201 632 aa23.79■■□□□ 1.4
UPF3A-201ENST00000351487 ACP6Q9NPH0 428 aa23.79■■□□□ 1.4
UPF3A-201ENST00000351487 DGAT1O75907 488 aa23.79■■□□□ 1.4
UPF3A-201ENST00000351487 GARTP22102 1010 aa23.79■■□□□ 1.4
UPF3A-201ENST00000351487 BRDTQ58F21 947 aaPredicted RBP23.79■■□□□ 1.4
UPF3A-201ENST00000351487 SEL1L2Q5TEA6 688 aa23.79■■□□□ 1.4
UPF3A-201ENST00000351487 AADACL2Q6P093 401 aa23.79■■□□□ 1.4
UPF3A-201ENST00000351487 POMGNT1Q8WZA1 660 aa23.79■■□□□ 1.4
UPF3A-201ENST00000351487 GLG1Q92896 1179 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms