RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 MAML3Q96JK9 1138 aa6.4□□□□□ -1.39
RFC1-201ENST00000349703 RPGRIP1Q96KN7 1286 aa6.4□□□□□ -1.39
RFC1-201ENST00000349703 HARBI1Q96MB7 349 aa6.4□□□□□ -1.39
RFC1-201ENST00000349703 BPIFA3Q9BQP9 254 aa6.4□□□□□ -1.39
RFC1-201ENST00000349703 TRIM56Q9BRZ2 755 aaKnown RBP6.4□□□□□ -1.39
RFC1-201ENST00000349703 NOC4LQ9BVI4 516 aaKnown RBP6.4□□□□□ -1.39
RFC1-201ENST00000349703 GSDMCQ9BYG8 508 aa6.4□□□□□ -1.39
RFC1-201ENST00000349703 XPO4Q9C0E2 1151 aaKnown RBP6.4□□□□□ -1.39
RFC1-201ENST00000349703 TAF6LQ9Y6J9 622 aa6.4□□□□□ -1.39
RFC1-201ENST00000349703 LOC102724428A0A0B4J2F2 783 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 NUDT19A8MXV4 375 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 PSMD3O43242 534 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 MTSS1O43312 755 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 GFPT2O94808 682 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 ITGAVP06756 1048 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 SCTRP47872 440 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 SIK1P57059 783 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 PCBP3P57721 371 aaKnown RBP6.39□□□□□ -1.39
RFC1-201ENST00000349703 GRM2Q14416 872 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 CRYMQ14894 314 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 ACAD11Q709F0 780 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 PPP1R42Q7Z4L9 355 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 CPNE8Q86YQ8 564 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 LSG1Q9H089 658 aaKnown RBP6.39□□□□□ -1.39
RFC1-201ENST00000349703 EPS8L2Q9H6S3 715 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 WBP1LQ9NX94 342 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 PPM1HQ9ULR3 514 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 WDR46O15213 610 aaKnown RBP6.39□□□□□ -1.39
RFC1-201ENST00000349703 LONP1P36776 959 aaKnown RBP6.39□□□□□ -1.39
RFC1-201ENST00000349703 HARS2P49590 506 aaKnown RBP6.39□□□□□ -1.39
RFC1-201ENST00000349703 PCBP4P57723 403 aaKnown RBP6.39□□□□□ -1.39
RFC1-201ENST00000349703 RALGDSQ12967 914 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 PRRT3Q5FWE3 981 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 RNF220Q5VTB9 566 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 TADA2BQ86TJ2 420 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 FAM129CQ86XR2 697 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 HMGB4Q8WW32 186 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 CNDP1Q96KN2 507 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 C8orf48Q96LL4 319 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 COG8Q96MW5 612 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 SPAG5Q96R06 1193 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 INCENPQ9NQS7 918 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 DPP7Q9UHL4 492 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 MSRAQ9UJ68 235 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 NEURL4Q96JN8 1562 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 FANCAO15360 1455 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 MYOM1P52179 1685 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 WASLO00401 505 aaPredicted RBP6.39□□□□□ -1.39
RFC1-201ENST00000349703 IKBKBO14920 756 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 SEC31AO94979 1220 aaKnown RBP6.39□□□□□ -1.39
RFC1-201ENST00000349703 YEATS4O95619 227 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 TFPIP10646 304 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 SYKP43405 635 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 SARNPP82979 210 aaKnown RBP6.39□□□□□ -1.39
RFC1-201ENST00000349703 NAE1Q13564 534 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 SRGAP1Q7Z6B7 1085 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 PHLDB2Q86SQ0 1253 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 WASF1Q92558 559 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 NAPGQ99747 312 aaPredicted RBP6.39□□□□□ -1.39
RFC1-201ENST00000349703 OSBPL1AQ9BXW6 950 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 MAGEB5Q9BZ81 275 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 KRT23Q9C075 422 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 KLHL25Q9H0H3 589 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 NUCKS1Q9H1E3 243 aaKnown RBP6.39□□□□□ -1.39
RFC1-201ENST00000349703 SERHLQ9NQF3 203 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 KIF17Q9P2E2 1029 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 TRIM33Q9UPN9 1127 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 PPP2R2CQ9Y2T4 447 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 PAM16Q9Y3D7 125 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 PCDHGA2Q9Y5H1 932 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 ADGRL3Q9HAR2 1447 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 TTC21AQ8NDW8 1320 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 GOLGA6L10A0A0M3HER8 536 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.39□□□□□ -1.39
RFC1-201ENST00000349703 RNASEH2AO75792 299 aaKnown RBP6.39□□□□□ -1.39
RFC1-201ENST00000349703 MOCS3O95396 460 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 SPEM2Q0P670 501 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 ME3Q16798 604 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 PKDCCQ504Y2 493 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 CNNM3Q8NE01 707 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 KLHDC4Q8TBB5 520 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 MAIP1Q8WWC4 291 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 RNF31Q96EP0 1072 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 NOD2Q9HC29 1040 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 MARK1Q9P0L2 795 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 BTBD7Q9P203 1132 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 POLKQ9UBT6 870 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 ASAP1Q9ULH1 1129 aa6.39□□□□□ -1.39
RFC1-201ENST00000349703 DIS3Q9Y2L1 958 aaKnown RBP6.39□□□□□ -1.39
RFC1-201ENST00000349703 PRAMEF22A3QJZ6 481 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 BIN1O00499 593 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 APOL1O14791 398 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 SLC9A1P19634 815 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 TMOD1P28289 359 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 PSMC1P62191 440 aaKnown RBP6.38□□□□□ -1.39
RFC1-201ENST00000349703 SCRN1Q12765 414 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 HSF5Q4G112 596 aaPredicted RBP6.38□□□□□ -1.39
RFC1-201ENST00000349703 ZC3H12BQ5HYM0 836 aaKnown RBP6.38□□□□□ -1.39
RFC1-201ENST00000349703 FAM180BQ6P0A1 224 aa6.38□□□□□ -1.39
RFC1-201ENST00000349703 MCM10Q7L590 875 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms