RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 CUL9Q8IWT3 2517 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 CITO14578 2027 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 ITGA4P13612 1032 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 PEX3P56589 373 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 TFF2Q03403 129 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 POU5F1BQ06416 359 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 DPYDQ12882 1025 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 PCBP1Q15365 356 aaKnown RBP eCLIP15.16■□□□□ 0.02
TPM4-202ENST00000344824 MAPK6Q16659 721 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 AMHR2Q16671 573 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 TCEAL5Q5H9L2 206 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 UBXN11Q5T124 520 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 CDCA2Q69YH5 1023 aaPredicted RBP15.16■□□□□ 0.02
TPM4-202ENST00000344824 RINT1Q6NUQ1 792 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 SYT2Q8N9I0 419 aaPredicted RBP15.16■□□□□ 0.02
TPM4-202ENST00000344824 URGCPQ8TCY9 931 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 POF1BQ8WVV4 589 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 P2RX5Q93086 422 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 DRC1Q96MC2 740 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 NFKBIZQ9BYH8 718 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 LMAN2LQ9H0V9 348 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 PLAGL2Q9UPG8 496 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 USP20Q9Y2K6 914 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 HES2Q9Y543 173 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 IPPQ9Y573 584 aa15.16■□□□□ 0.02
TPM4-202ENST00000344824 NT5C1B-RDH14C9J2C7 533 aa15.15■□□□□ 0.02
TPM4-202ENST00000344824 FGF18O76093 207 aa15.15■□□□□ 0.02
TPM4-202ENST00000344824 SMC2O95347 1197 aa15.15■□□□□ 0.02
TPM4-202ENST00000344824 DMP1Q13316 513 aaPredicted RBP15.15■□□□□ 0.02
TPM4-202ENST00000344824 PRPF4BQ13523 1007 aaKnown RBP15.15■□□□□ 0.02
TPM4-202ENST00000344824 NOMO2Q5JPE7 1267 aa15.15■□□□□ 0.02
TPM4-202ENST00000344824 SASS6Q6UVJ0 657 aa15.15■□□□□ 0.02
TPM4-202ENST00000344824 KCNT2Q6UVM3 1135 aa15.15■□□□□ 0.02
TPM4-202ENST00000344824 AGMOQ6ZNB7 445 aa15.15■□□□□ 0.02
TPM4-202ENST00000344824 LRRC55Q6ZSA7 311 aa15.15■□□□□ 0.02
TPM4-202ENST00000344824 RBM43Q6ZSC3 357 aaKnown RBP15.15■□□□□ 0.02
TPM4-202ENST00000344824 ELOA2Q8IYF1 753 aaPredicted RBP15.15■□□□□ 0.02
TPM4-202ENST00000344824 MICAL1Q8TDZ2 1067 aa15.15■□□□□ 0.02
TPM4-202ENST00000344824 DDX12PQ92771 950 aa15.15■□□□□ 0.02
TPM4-202ENST00000344824 CCDC51Q96ER9 411 aa15.15■□□□□ 0.02
TPM4-202ENST00000344824 TRAIPQ9BWF2 469 aa15.15■□□□□ 0.02
TPM4-202ENST00000344824 TRIM9Q9C026 710 aa15.15■□□□□ 0.02
TPM4-202ENST00000344824 NXF3Q9H4D5 531 aaKnown RBP15.15■□□□□ 0.02
TPM4-202ENST00000344824 A0A0C4DFX4 3053 aa15.15■□□□□ 0.02
TPM4-202ENST00000344824 CNTNAP2Q9UHC6 1331 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 SFI1A8K8P3 1242 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 ZNF623O75123 536 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 RPN1P04843 607 aaKnown RBP15.14■□□□□ 0.01
TPM4-202ENST00000344824 IDEP14735 1019 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 DNAJB1P25685 340 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 MLH1P40692 756 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 SLC27A1Q6PCB7 646 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 HACE1Q8IYU2 909 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 KCTD17Q8N5Z5 321 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 SMG8Q8ND04 991 aaKnown RBP15.14■□□□□ 0.01
TPM4-202ENST00000344824 SPPL3Q8TCT6 385 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 HLA-CQ95604 372 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 PRIMPOLQ96LW4 560 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 FAM193BQ96PV7 902 aaPredicted RBP15.14■□□□□ 0.01
TPM4-202ENST00000344824 C7orf25Q9BPX7 421 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 ANP32EQ9BTT0 268 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 LRRC27Q9C0I9 530 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 ZHX3Q9H4I2 956 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 IGFLR1Q9H665 355 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 KMT5AQ9NQR1 393 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 TBC1D13Q9NVG8 400 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 PARP2Q9UGN5 583 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 MAN1B1Q9UKM7 699 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 PCDHGC5Q9Y5F6 944 aa15.14■□□□□ 0.01
TPM4-202ENST00000344824 TTLL13PA6NNM8 815 aa15.13■□□□□ 0.01
TPM4-202ENST00000344824 N4BP3O15049 544 aa15.13■□□□□ 0.01
TPM4-202ENST00000344824 OFD1O75665 1012 aa15.13■□□□□ 0.01
TPM4-202ENST00000344824 POMCP01189 267 aa15.13■□□□□ 0.01
TPM4-202ENST00000344824 IRS1P35568 1242 aa15.13■□□□□ 0.01
TPM4-202ENST00000344824 PPM1AP35813 382 aa15.13■□□□□ 0.01
TPM4-202ENST00000344824 TYRO3Q06418 890 aa15.13■□□□□ 0.01
TPM4-202ENST00000344824 ARSHQ5FYA8 562 aa15.13■□□□□ 0.01
TPM4-202ENST00000344824 PLPP4Q5VZY2 271 aa15.13■□□□□ 0.01
TPM4-202ENST00000344824 C1orf186Q6ZWK4 172 aa15.13■□□□□ 0.01
TPM4-202ENST00000344824 PPP2R3CQ969Q6 453 aa15.13■□□□□ 0.01
TPM4-202ENST00000344824 ADPGKQ9BRR6 497 aa15.13■□□□□ 0.01
TPM4-202ENST00000344824 ENTPD7Q9NQZ7 604 aa15.13■□□□□ 0.01
TPM4-202ENST00000344824 TLR9Q9NR96 1032 aa15.13■□□□□ 0.01
TPM4-202ENST00000344824 PHLPP2Q6ZVD8 1323 aa15.13■□□□□ 0.01
TPM4-202ENST00000344824 XIRP2A4UGR9 3374 aa15.13■□□□□ 0.01
TPM4-202ENST00000344824 SLC16A4O15374 487 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 EDN1P05305 212 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 AKAP5P24588 427 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 NPTX2P47972 431 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 ALDH7A1P49419 539 aaKnown RBP15.12■□□□□ 0.01
TPM4-202ENST00000344824 SCNN1GP51170 649 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 EFNA5P52803 228 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 BCAR1P56945 870 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 MRPS5P82675 430 aaKnown RBP15.12■□□□□ 0.01
TPM4-202ENST00000344824 MAPK7Q13164 816 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 KMT5BQ4FZB7 885 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 TJAP1Q5JTD0 557 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 LRSAM1Q6UWE0 723 aa15.12■□□□□ 0.01
TPM4-202ENST00000344824 MRPL10Q7Z7H8 261 aaKnown RBP15.12■□□□□ 0.01
TPM4-202ENST00000344824 ADGRD2Q7Z7M1 963 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms