RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 DCDC2CA8MYV0 355 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 C21orf2O43822 256 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 RTN2O75298 545 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 QARSP47897 775 aaKnown RBP13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 ITGA8P53708 1063 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 MDH1BQ5I0G3 518 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 TMC3Q7Z5M5 1100 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 DHX38Q92620 1227 aaKnown RBP13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 SLC35C1Q96A29 364 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 CFAP36Q96G28 342 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 FERMT1Q9BQL6 677 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 WNT8AQ9H1J5 351 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 AIPL1Q9NZN9 384 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 TRPC6Q9Y210 931 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 DIS3Q9Y2L1 958 aaKnown RBP13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 PIK3R2O00459 728 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 UBOX5O94941 541 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 PSMC4P43686 418 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 LDHDQ86WU2 507 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 SLC17A8Q8NDX2 589 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 KAT5Q92993 513 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 DNAJC19Q96DA6 116 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 MTMR9Q96QG7 549 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 NUDCD1Q96RS6 583 aa13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 XRN1Q8IZH2 1706 aaKnown RBP13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 FAM208AQ9UK61 1670 aaKnown RBP13.25□□□□□ -0.29
SNRNP48-201ENST00000342415 FAM86B1E9PN63 330 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 FAM86B2P0C5J1 330 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 ARL1P40616 181 aaPredicted RBP13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 ARSEP51690 589 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 P3H1Q32P28 736 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 ZC3H18Q86VM9 953 aaKnown RBP13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 NIM1KQ8IY84 436 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 FBXL13Q8NEE6 735 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 ACTRT1Q8TDG2 376 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 SLC7A3Q8WY07 619 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 SEPT10Q9P0V9 454 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 CCDC195A0A1B0GUA6 201 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 ZFPM1Q8IX07 1006 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 IQCKQ8N0W5 287 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 ARHGAP24Q8N264 748 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 GBP7Q8N8V2 638 aaPredicted RBP13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 SNF8Q96H20 258 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 FAM84AQ96KN4 292 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 GABBR1Q9UBS5 961 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 USH1CQ9Y6N9 552 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 GYG2O15488 501 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 P4HBP07237 508 aaKnown RBP13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 SHROOM1Q2M3G4 852 aaPredicted RBP13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 SWSAP1Q6NVH7 229 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 CENPUQ71F23 418 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 LONP2Q86WA8 852 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 MCF2L2Q86YR7 1114 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 CBWD2Q8IUF1 395 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 ACER1Q8TDN7 264 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 PITPNM2Q9BZ72 1349 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 SLC13A1Q9BZW2 595 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 ZNF408Q9H9D4 720 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 EML1O00423 815 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 PJA2O43164 708 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 DKC1O60832 514 aaKnown RBP eCLIP13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 ARP10275 920 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 SERPINB6P35237 376 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 COILP38432 576 aaPredicted RBP13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 MARCKSL1P49006 195 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 QPCTQ16769 361 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 CBWD6Q4V339 395 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 SEZ6Q53EL9 994 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 CBWD3Q5JTY5 395 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 CBWD5Q5RIA9 395 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 LGSNQ5TDP6 509 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 DARS2Q6PI48 645 aaKnown RBP13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 NT5DC3Q86UY8 548 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 KCTD6Q8NC69 237 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 BCAS3Q9H6U6 928 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 NPHS2Q9NP85 383 aa13.24□□□□□ -0.29
SNRNP48-201ENST00000342415 OVGP1Q12889 678 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 SNRNP35Q16560 246 aaKnown RBP13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 PDIK1LQ8N165 341 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 KAT2BQ92831 832 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 ATP6V0A1Q93050 837 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 INPP4AQ96PE3 977 aaPredicted RBP13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 MSTO1Q9BUK6 570 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 OSBPL1AQ9BXW6 950 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 PPARGC1AQ9UBK2 798 aaKnown RBP13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 ZFP69BQ9UJL9 534 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 ARL2BPQ9Y2Y0 163 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 PCDHGC5Q9Y5F6 944 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 HEY1Q9Y5J3 304 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 DDTLA6NHG4 134 aaPredicted RBP13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 TOM1L1O75674 476 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 PIAS1O75925 651 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 RALAP11233 206 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 LMNB2Q03252 620 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 SLC47A2Q86VL8 602 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 SLC13A5Q86YT5 568 aaPredicted RBP13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 TOPORSQ9NS56 1045 aaPredicted RBP13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 SPATS2LQ9NUQ6 558 aaKnown RBP13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 ZBTB12Q9Y330 459 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms