RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 SRPRBQ9Y5M8 271 aaKnown RBP16.09■□□□□ 0.17
ERCC1-203ENST00000340192 PHLPP2Q6ZVD8 1323 aa16.09■□□□□ 0.17
ERCC1-203ENST00000340192 TTC28Q96AY4 2481 aa16.08■□□□□ 0.17
ERCC1-203ENST00000340192 GRXCR2A6NFK2 248 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 NRP1O14786 923 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 SLC16A4O15374 487 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 GLP2RO95838 553 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 ALDH2P05091 517 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 PLS3P13797 630 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 NDUFV1P49821 464 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 CACNB1Q02641 598 aaPredicted RBP16.08■□□□□ 0.16
ERCC1-203ENST00000340192 DHX8Q14562 1220 aaKnown RBP16.08■□□□□ 0.16
ERCC1-203ENST00000340192 SMC1AQ14683 1233 aaKnown RBP16.08■□□□□ 0.16
ERCC1-203ENST00000340192 CLUL1Q15846 466 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 DUSP6Q16828 381 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 PUS10Q3MIT2 529 aaKnown RBP16.08■□□□□ 0.16
ERCC1-203ENST00000340192 EEF1DP3Q658K8 133 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 TAS1R3Q7RTX0 852 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 DDX53Q86TM3 631 aaKnown RBP16.08■□□□□ 0.16
ERCC1-203ENST00000340192 COLGALT2Q8IYK4 626 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 VPS52Q8N1B4 723 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 GSTCDQ8NEC7 633 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 CLIC6Q96NY7 704 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 CDCA3Q99618 268 aaPredicted RBP16.08■□□□□ 0.16
ERCC1-203ENST00000340192 TMEM175Q9BSA9 504 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 NTPCRQ9BSD7 190 aaKnown RBP16.08■□□□□ 0.16
ERCC1-203ENST00000340192 CCSER1Q9C0I3 900 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 TMEM134Q9H6X4 195 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 FAN1Q9Y2M0 1017 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 RBM19Q9Y4C8 960 aaKnown RBP16.08■□□□□ 0.16
ERCC1-203ENST00000340192 ZMYM2Q9UBW7 1377 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 BDP1A6H8Y1 2624 aa16.08■□□□□ 0.16
ERCC1-203ENST00000340192 TNFRSF10AO00220 468 aa16.07■□□□□ 0.16
ERCC1-203ENST00000340192 IL9P15248 144 aa16.07■□□□□ 0.16
ERCC1-203ENST00000340192 OR1G1P47890 313 aa16.07■□□□□ 0.16
ERCC1-203ENST00000340192 RBM10P98175 930 aaKnown RBP16.07■□□□□ 0.16
ERCC1-203ENST00000340192 DSC1Q08554 894 aa16.07■□□□□ 0.16
ERCC1-203ENST00000340192 MCM6Q14566 821 aa16.07■□□□□ 0.16
ERCC1-203ENST00000340192 SLC39A14Q15043 492 aa16.07■□□□□ 0.16
ERCC1-203ENST00000340192 DCAF4L1Q3SXM0 396 aa16.07■□□□□ 0.16
ERCC1-203ENST00000340192 GPBP1Q86WP2 473 aa16.07■□□□□ 0.16
ERCC1-203ENST00000340192 MRPL43Q8N983 215 aaKnown RBP16.07■□□□□ 0.16
ERCC1-203ENST00000340192 SPRYD3Q8NCJ5 442 aa16.07■□□□□ 0.16
ERCC1-203ENST00000340192 VN1R2Q8NFZ6 395 aa16.07■□□□□ 0.16
ERCC1-203ENST00000340192 SPIRE2Q8WWL2 714 aa16.07■□□□□ 0.16
ERCC1-203ENST00000340192 RAD54LQ92698 747 aa16.07■□□□□ 0.16
ERCC1-203ENST00000340192 REEP2Q9BRK0 252 aa16.07■□□□□ 0.16
ERCC1-203ENST00000340192 VN1R3Q9BXE9 311 aa16.07■□□□□ 0.16
ERCC1-203ENST00000340192 ZBP1Q9H171 429 aa16.07■□□□□ 0.16
ERCC1-203ENST00000340192 SNTG2Q9NY99 539 aa16.07■□□□□ 0.16
ERCC1-203ENST00000340192 CLEC1BQ9P126 229 aa16.07■□□□□ 0.16
ERCC1-203ENST00000340192 TRIP11Q15643 1979 aa16.07■□□□□ 0.16
ERCC1-203ENST00000340192 FSD2A1L4K1 749 aa16.06■□□□□ 0.16
ERCC1-203ENST00000340192 C2orf71A6NGG8 1288 aa16.06■□□□□ 0.16
ERCC1-203ENST00000340192 RECQL4O94761 1208 aa16.06■□□□□ 0.16
ERCC1-203ENST00000340192 CXCL14O95715 111 aa16.06■□□□□ 0.16
ERCC1-203ENST00000340192 CA8P35219 290 aa16.06■□□□□ 0.16
ERCC1-203ENST00000340192 NASPP49321 788 aaPredicted RBP16.06■□□□□ 0.16
ERCC1-203ENST00000340192 SMTNP53814 917 aa16.06■□□□□ 0.16
ERCC1-203ENST00000340192 GRIK3Q13003 919 aa16.06■□□□□ 0.16
ERCC1-203ENST00000340192 BMS1Q14692 1282 aaKnown RBP16.06■□□□□ 0.16
ERCC1-203ENST00000340192 FOXD4L5Q5VV16 416 aaPredicted RBP16.06■□□□□ 0.16
ERCC1-203ENST00000340192 TMEM161BQ8NDZ6 487 aa16.06■□□□□ 0.16
ERCC1-203ENST00000340192 FOXD4L4Q8WXT5 416 aaPredicted RBP16.06■□□□□ 0.16
ERCC1-203ENST00000340192 AUTS2Q8WXX7 1259 aa16.06■□□□□ 0.16
ERCC1-203ENST00000340192 LARP4BQ92615 738 aaKnown RBP16.06■□□□□ 0.16
ERCC1-203ENST00000340192 MSLNLQ96KJ4 702 aa16.06■□□□□ 0.16
ERCC1-203ENST00000340192 RPS6KC1Q96S38 1066 aa16.06■□□□□ 0.16
ERCC1-203ENST00000340192 ACO2Q99798 780 aaKnown RBP16.06■□□□□ 0.16
ERCC1-203ENST00000340192 MRPL4Q9BYD3 311 aaKnown RBP16.06■□□□□ 0.16
ERCC1-203ENST00000340192 KCNG1Q9UIX4 513 aa16.06■□□□□ 0.16
ERCC1-203ENST00000340192 CD207Q9UJ71 328 aa16.06■□□□□ 0.16
ERCC1-203ENST00000340192 ODF2LQ9ULJ1 636 aa16.06■□□□□ 0.16
ERCC1-203ENST00000340192 BARX2Q9UMQ3 279 aaPredicted RBP16.06■□□□□ 0.16
ERCC1-203ENST00000340192 TNFSF13BQ9Y275 285 aa16.06■□□□□ 0.16
ERCC1-203ENST00000340192 PRG3Q9Y2Y8 225 aaPredicted RBP16.06■□□□□ 0.16
ERCC1-203ENST00000340192 MORC2Q9Y6X9 1032 aaPredicted RBP16.06■□□□□ 0.16
ERCC1-203ENST00000340192 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.05■□□□□ 0.16
ERCC1-203ENST00000340192 MAPTP10636 758 aaKnown RBP16.05■□□□□ 0.16
ERCC1-203ENST00000340192 DDIT3P35638 169 aa16.05■□□□□ 0.16
ERCC1-203ENST00000340192 LLGL2Q6P1M3 1020 aa16.05■□□□□ 0.16
ERCC1-203ENST00000340192 APBB1IPQ7Z5R6 666 aaPredicted RBP16.05■□□□□ 0.16
ERCC1-203ENST00000340192 KRI1Q8N9T8 703 aaKnown RBP16.05■□□□□ 0.16
ERCC1-203ENST00000340192 TARS2Q9BW92 718 aaKnown RBP16.05■□□□□ 0.16
ERCC1-203ENST00000340192 CXCL16Q9H2A7 254 aa16.05■□□□□ 0.16
ERCC1-203ENST00000340192 PTPRHQ9HD43 1115 aa16.05■□□□□ 0.16
ERCC1-203ENST00000340192 MARCH5Q9NX47 278 aa16.05■□□□□ 0.16
ERCC1-203ENST00000340192 LARSQ9P2J5 1176 aaKnown RBP16.05■□□□□ 0.16
ERCC1-203ENST00000340192 STK39Q9UEW8 545 aa16.05■□□□□ 0.16
ERCC1-203ENST00000340192 CCDC39Q9UFE4 941 aa16.05■□□□□ 0.16
ERCC1-203ENST00000340192 FAM50BQ9Y247 325 aa16.05■□□□□ 0.16
ERCC1-203ENST00000340192 GDAQ9Y2T3 454 aa16.05■□□□□ 0.16
ERCC1-203ENST00000340192 F8W810 466 aa16.04■□□□□ 0.16
ERCC1-203ENST00000340192 NR1I2O75469 434 aa16.04■□□□□ 0.16
ERCC1-203ENST00000340192 KRT18P05783 430 aaKnown RBP16.04■□□□□ 0.16
ERCC1-203ENST00000340192 ZSCAN22P10073 491 aaPredicted RBP16.04■□□□□ 0.16
ERCC1-203ENST00000340192 CTSAP10619 480 aa16.04■□□□□ 0.16
ERCC1-203ENST00000340192 PDIA4P13667 645 aaKnown RBP16.04■□□□□ 0.16
ERCC1-203ENST00000340192 TXLNAP40222 546 aa16.04■□□□□ 0.16
ERCC1-203ENST00000340192 NCKAP1LP55160 1127 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms