RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CHORDC1Q9UHD1 332 aaPredicted RBP17.62■□□□□ 0.41
LITAF-201ENST00000339430 COG5Q9UP83 839 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 UBIAD1Q9Y5Z9 338 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 MYO1CO00159 1063 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 KIF3CO14782 793 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 TTI1O43156 1089 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 ATP9AO75110 1047 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 PPFIA4O75335 1185 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 CCDC172P0C7W6 258 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 PLS3P13797 630 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 DCAF12L1Q5VU92 463 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 ZNF746Q6NUN9 644 aaPredicted RBP17.61■□□□□ 0.41
LITAF-201ENST00000339430 INTS8Q75QN2 995 aaKnown RBP17.61■□□□□ 0.41
LITAF-201ENST00000339430 HAUS6Q7Z4H7 955 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 C10orf67Q8IYJ2 551 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 MREGQ8N565 214 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 AGPAT1Q99943 283 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 PLAAQ9Y263 795 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 NR2E1Q9Y466 385 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 COPB2P35606 906 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 ZNF211Q13398 564 aaPredicted RBP17.61■□□□□ 0.41
LITAF-201ENST00000339430 KIF22Q14807 665 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 C1orf220Q5T0J3 134 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 PTPN18Q99952 460 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 FBXO40Q9UH90 709 aa17.61■□□□□ 0.41
LITAF-201ENST00000339430 DDX3YO15523 660 aaKnown RBP17.6■□□□□ 0.41
LITAF-201ENST00000339430 DAPK3O43293 454 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 ANKRD23Q86SG2 305 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 XXYLT1Q8NBI6 393 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 NSUN6Q8TEA1 469 aaKnown RBP17.6■□□□□ 0.41
LITAF-201ENST00000339430 KIFC3Q9BVG8 833 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 DBR1Q9UK59 544 aaKnown RBP17.6■□□□□ 0.41
LITAF-201ENST00000339430 GRIN2DO15399 1336 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 TESPA1A2RU30 521 aaPredicted RBP17.6■□□□□ 0.41
LITAF-201ENST00000339430 TMEM110-MUSTN1A8MSY1 372 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 CCDC188H7C350 402 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 FLT3P36888 993 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 PPARDQ03181 441 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 PDCLQ13371 301 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 FAM102BQ5T8I3 360 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 RASAL3Q86YV0 1011 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 OR2W6PQ8NHA6 318 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 TRIM31Q9BZY9 425 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 DPH5Q9H2P9 285 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 CENPHQ9H3R5 247 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 ACP6Q9NPH0 428 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 TCEAL9Q9UHQ7 104 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 SLC45A1Q9Y2W3 748 aa17.6■□□□□ 0.41
LITAF-201ENST00000339430 HSD17B3P37058 310 aa17.59■□□□□ 0.41
LITAF-201ENST00000339430 HSPA9P38646 679 aaKnown RBP17.59■□□□□ 0.41
LITAF-201ENST00000339430 CETN1Q12798 172 aa17.59■□□□□ 0.41
LITAF-201ENST00000339430 XKR9Q5GH70 373 aa17.59■□□□□ 0.41
LITAF-201ENST00000339430 CEP85LQ5SZL2 805 aa17.59■□□□□ 0.41
LITAF-201ENST00000339430 RPUSD2Q8IZ73 545 aaKnown RBP17.59■□□□□ 0.41
LITAF-201ENST00000339430 ELMO3Q96BJ8 720 aa17.59■□□□□ 0.41
LITAF-201ENST00000339430 SAAL1Q96ER3 474 aa17.59■□□□□ 0.41
LITAF-201ENST00000339430 ANKRD62A6NC57 917 aa17.59■□□□□ 0.41
LITAF-201ENST00000339430 SLC25A27O95847 323 aa17.59■□□□□ 0.41
LITAF-201ENST00000339430 ADRB2P07550 413 aa17.59■□□□□ 0.41
LITAF-201ENST00000339430 NR3C2P08235 984 aa17.59■□□□□ 0.41
LITAF-201ENST00000339430 CNTN2Q02246 1040 aa17.59■□□□□ 0.41
LITAF-201ENST00000339430 CUL1Q13616 776 aa17.59■□□□□ 0.41
LITAF-201ENST00000339430 MYBPC2Q14324 1141 aa17.59■□□□□ 0.41
LITAF-201ENST00000339430 EPC2Q52LR7 807 aa17.59■□□□□ 0.41
LITAF-201ENST00000339430 RGMBQ6NW40 437 aa17.59■□□□□ 0.41
LITAF-201ENST00000339430 AADACL2Q6P093 401 aa17.59■□□□□ 0.41
LITAF-201ENST00000339430 NIPA1Q7RTP0 329 aa17.59■□□□□ 0.41
LITAF-201ENST00000339430 TRIM51Q9BSJ1 452 aa17.59■□□□□ 0.41
LITAF-201ENST00000339430 PFASO15067 1338 aa17.58■□□□□ 0.41
LITAF-201ENST00000339430 CCDC169A6NNP5 214 aa17.58■□□□□ 0.41
LITAF-201ENST00000339430 EIF3HO15372 352 aaKnown RBP eCLIP17.58■□□□□ 0.41
LITAF-201ENST00000339430 CCNE2O96020 404 aa17.58■□□□□ 0.41
LITAF-201ENST00000339430 FTLP02792 175 aaPredicted RBP17.58■□□□□ 0.41
LITAF-201ENST00000339430 CCT5P48643 541 aa17.58■□□□□ 0.41
LITAF-201ENST00000339430 MAP2K1Q02750 393 aaPredicted RBP17.58■□□□□ 0.41
LITAF-201ENST00000339430 WDR78Q5VTH9 848 aa17.58■□□□□ 0.41
LITAF-201ENST00000339430 VSIG10LQ86VR7 867 aa17.58■□□□□ 0.41
LITAF-201ENST00000339430 CBWD2Q8IUF1 395 aa17.58■□□□□ 0.41
LITAF-201ENST00000339430 SMC1BQ8NDV3 1235 aa17.58■□□□□ 0.41
LITAF-201ENST00000339430 BCAS4Q8TDM0 211 aa17.58■□□□□ 0.41
LITAF-201ENST00000339430 RNPC3Q96LT9 517 aaKnown RBP17.58■□□□□ 0.41
LITAF-201ENST00000339430 TMEM117Q9H0C3 514 aa17.58■□□□□ 0.41
LITAF-201ENST00000339430 CTTNBP2NLQ9P2B4 639 aa17.58■□□□□ 0.41
LITAF-201ENST00000339430 ANKRD63C9JTQ0 380 aa17.58■□□□□ 0.4
LITAF-201ENST00000339430 ATMINO43313 823 aaPredicted RBP17.58■□□□□ 0.4
LITAF-201ENST00000339430 SGPL1O95470 568 aa17.58■□□□□ 0.4
LITAF-201ENST00000339430 MAPTP10636 758 aaKnown RBP17.58■□□□□ 0.4
LITAF-201ENST00000339430 MXI1P50539 228 aa17.58■□□□□ 0.4
LITAF-201ENST00000339430 SOX10P56693 466 aa17.58■□□□□ 0.4
LITAF-201ENST00000339430 GTF2BQ00403 316 aa17.58■□□□□ 0.4
LITAF-201ENST00000339430 ALCAMQ13740 583 aa17.58■□□□□ 0.4
LITAF-201ENST00000339430 UAP1Q16222 522 aaPredicted RBP17.58■□□□□ 0.4
LITAF-201ENST00000339430 CCDC26Q8TAB7 109 aa17.58■□□□□ 0.4
LITAF-201ENST00000339430 CCDC127Q96BQ5 260 aa17.58■□□□□ 0.4
LITAF-201ENST00000339430 POP1Q99575 1024 aaKnown RBP17.58■□□□□ 0.4
LITAF-201ENST00000339430 MAF1Q9H063 256 aa17.58■□□□□ 0.4
LITAF-201ENST00000339430 ERVK-5Q9HDB9 667 aa17.58■□□□□ 0.4
LITAF-201ENST00000339430 TBC1D22BQ9NU19 505 aa17.58■□□□□ 0.4
LITAF-201ENST00000339430 FEZ2Q9UHY8 353 aaPredicted RBP17.58■□□□□ 0.4
LITAF-201ENST00000339430 RFX1P22670 979 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms