RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SLC16A4O15374 487 aa16.81■□□□□ 0.28
PRKN-201ENST00000338468 POMCP01189 267 aa16.81■□□□□ 0.28
PRKN-201ENST00000338468 PLS3P13797 630 aa16.81■□□□□ 0.28
PRKN-201ENST00000338468 AKAP5P24588 427 aa16.81■□□□□ 0.28
PRKN-201ENST00000338468 PPM1AP35813 382 aa16.81■□□□□ 0.28
PRKN-201ENST00000338468 LTBRP36941 435 aa16.81■□□□□ 0.28
PRKN-201ENST00000338468 MLH1P40692 756 aa16.81■□□□□ 0.28
PRKN-201ENST00000338468 SLC11A1P49279 550 aa16.81■□□□□ 0.28
PRKN-201ENST00000338468 DMP1Q13316 513 aaPredicted RBP16.81■□□□□ 0.28
PRKN-201ENST00000338468 EP400NLQ6ZTU2 488 aa16.81■□□□□ 0.28
PRKN-201ENST00000338468 GPBP1Q86WP2 473 aa16.81■□□□□ 0.28
PRKN-201ENST00000338468 URGCPQ8TCY9 931 aa16.81■□□□□ 0.28
PRKN-201ENST00000338468 SPIRE2Q8WWL2 714 aa16.81■□□□□ 0.28
PRKN-201ENST00000338468 TRIM6Q9C030 488 aaPredicted RBP16.81■□□□□ 0.28
PRKN-201ENST00000338468 GBP3Q9H0R5 595 aa16.81■□□□□ 0.28
PRKN-201ENST00000338468 TMEM134Q9H6X4 195 aa16.81■□□□□ 0.28
PRKN-201ENST00000338468 KMT5AQ9NQR1 393 aa16.81■□□□□ 0.28
PRKN-201ENST00000338468 TFIP11Q9UBB9 837 aaKnown RBP16.81■□□□□ 0.28
PRKN-201ENST00000338468 PRKAG3Q9UGI9 489 aa16.81■□□□□ 0.28
PRKN-201ENST00000338468 GIT1Q9Y2X7 761 aa16.81■□□□□ 0.28
PRKN-201ENST00000338468 PHLPP2Q6ZVD8 1323 aa16.8■□□□□ 0.28
PRKN-201ENST00000338468 K7ERI5 159 aa16.8■□□□□ 0.28
PRKN-201ENST00000338468 LINC01565O15544 149 aa16.8■□□□□ 0.28
PRKN-201ENST00000338468 F13A1P00488 732 aa16.8■□□□□ 0.28
PRKN-201ENST00000338468 ALDH7A1P49419 539 aaKnown RBP16.8■□□□□ 0.28
PRKN-201ENST00000338468 SCNN1GP51170 649 aa16.8■□□□□ 0.28
PRKN-201ENST00000338468 NHLH1Q02575 133 aa16.8■□□□□ 0.28
PRKN-201ENST00000338468 RNASELQ05823 741 aaKnown RBP16.8■□□□□ 0.28
PRKN-201ENST00000338468 ZP2Q05996 745 aa16.8■□□□□ 0.28
PRKN-201ENST00000338468 DHX8Q14562 1220 aaKnown RBP16.8■□□□□ 0.28
PRKN-201ENST00000338468 KRI1Q8N9T8 703 aaKnown RBP16.8■□□□□ 0.28
PRKN-201ENST00000338468 TMEM161BQ8NDZ6 487 aa16.8■□□□□ 0.28
PRKN-201ENST00000338468 IGSF21Q96ID5 467 aa16.8■□□□□ 0.28
PRKN-201ENST00000338468 REEP2Q9BRK0 252 aa16.8■□□□□ 0.28
PRKN-201ENST00000338468 VN1R3Q9BXE9 311 aa16.8■□□□□ 0.28
PRKN-201ENST00000338468 CXCL16Q9H2A7 254 aa16.8■□□□□ 0.28
PRKN-201ENST00000338468 PTPRHQ9HD43 1115 aa16.8■□□□□ 0.28
PRKN-201ENST00000338468 KLK14Q9P0G3 267 aa16.8■□□□□ 0.28
PRKN-201ENST00000338468 KANSL3Q9P2N6 904 aa16.8■□□□□ 0.28
PRKN-201ENST00000338468 A0A087X0B3 334 aa16.79■□□□□ 0.28
PRKN-201ENST00000338468 ABLIM1O14639 778 aa16.79■□□□□ 0.28
PRKN-201ENST00000338468 MAPTP10636 758 aaKnown RBP16.79■□□□□ 0.28
PRKN-201ENST00000338468 PDIA4P13667 645 aaKnown RBP16.79■□□□□ 0.28
PRKN-201ENST00000338468 DDIT3P35638 169 aa16.79■□□□□ 0.28
PRKN-201ENST00000338468 DLX2Q07687 328 aaPredicted RBP16.79■□□□□ 0.28
PRKN-201ENST00000338468 DSC1Q08554 894 aa16.79■□□□□ 0.28
PRKN-201ENST00000338468 GIT2Q14161 759 aa16.79■□□□□ 0.28
PRKN-201ENST00000338468 ATF7IP2Q5U623 682 aa16.79■□□□□ 0.28
PRKN-201ENST00000338468 COLGALT2Q8IYK4 626 aa16.79■□□□□ 0.28
PRKN-201ENST00000338468 LARP4BQ92615 738 aaKnown RBP16.79■□□□□ 0.28
PRKN-201ENST00000338468 ACO2Q99798 780 aaKnown RBP16.79■□□□□ 0.28
PRKN-201ENST00000338468 TMEM175Q9BSA9 504 aa16.79■□□□□ 0.28
PRKN-201ENST00000338468 SNTG2Q9NY99 539 aa16.79■□□□□ 0.28
PRKN-201ENST00000338468 RBM19Q9Y4C8 960 aaKnown RBP16.79■□□□□ 0.28
PRKN-201ENST00000338468 WDFY4Q6ZS81 3184 aa16.79■□□□□ 0.28
PRKN-201ENST00000338468 MYH11P35749 1972 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 ZMYM2Q9UBW7 1377 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 HIDE1A8MVS5 230 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 TBX10O75333 385 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 ZNF131P52739 623 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 KRT17Q04695 432 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 ADAM15Q13444 863 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 STK38Q15208 465 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 FOXD4L6Q3SYB3 417 aaPredicted RBP16.78■□□□□ 0.28
PRKN-201ENST00000338468 PLPP4Q5VZY2 271 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 PDE12Q6L8Q7 609 aaKnown RBP16.78■□□□□ 0.28
PRKN-201ENST00000338468 FOXD4L3Q6VB84 417 aaPredicted RBP16.78■□□□□ 0.28
PRKN-201ENST00000338468 RBM23Q86U06 439 aaKnown RBP16.78■□□□□ 0.28
PRKN-201ENST00000338468 ADHFE1Q8IWW8 467 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 HACE1Q8IYU2 909 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 RASSF8Q8NHQ8 419 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 MICAL1Q8TDZ2 1067 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 KCNN1Q92952 543 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 FBXL18Q96ME1 805 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 ZNF396Q96N95 335 aaPredicted RBP16.78■□□□□ 0.28
PRKN-201ENST00000338468 TCF25Q9BQ70 676 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 TARS2Q9BW92 718 aaKnown RBP16.78■□□□□ 0.28
PRKN-201ENST00000338468 IGFLR1Q9H665 355 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 MARCH5Q9NX47 278 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 CLDND1Q9NY35 253 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 PARP2Q9UGN5 583 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 PUF60Q9UHX1 559 aaKnown RBP16.78■□□□□ 0.28
PRKN-201ENST00000338468 ODF2LQ9ULJ1 636 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 TNFSF13BQ9Y275 285 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 ZDHHC9Q9Y397 364 aa16.78■□□□□ 0.28
PRKN-201ENST00000338468 TDRD15B5MCY1 1934 aaKnown RBP16.77■□□□□ 0.28
PRKN-201ENST00000338468 F8W810 466 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 PTGESO14684 152 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 NRP1O14786 923 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 PER2O15055 1255 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 SPTLC2O15270 562 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 NCK2O43639 380 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 PPP6R2O75170 966 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 RECQL4O94761 1208 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 YEATS4O95619 227 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 GLP2RO95838 553 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 EFEMP2O95967 443 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 PROZP22891 400 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 NRIP1P48552 1158 aa16.77■□□□□ 0.28
PRKN-201ENST00000338468 NCKAP1LP55160 1127 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms