RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 PCDH8O95206 1070 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 AMHP03971 560 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 XPAP23025 273 aaPredicted RBP2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 SAFB2Q14151 953 aaKnown RBP eCLIP2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 DDB1Q16531 1140 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 UNC5BQ8IZJ1 945 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 THEMISQ8N1K5 641 aaPredicted RBP2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 ARL8AQ96BM9 186 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 GPHA2Q96T91 129 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 WNT8AQ9H1J5 351 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 KCNG1Q9UIX4 513 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 MROH1Q8NDA8 1641 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 TRAPPC8Q9Y2L5 1435 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 A0A087X0B3 334 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 TLDC2A0PJX2 215 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 ELL2O00472 640 aaPredicted RBP2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 KDM1AO60341 852 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 HNRNPLP14866 589 aaKnown RBP eCLIP2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 GPR15P49685 360 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 GYS2P54840 703 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 NRG3P56975 720 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 ADAM8P78325 824 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 CRHR2Q13324 411 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 FOXE3Q13461 319 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 DHCR24Q15392 516 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 TERF2Q15554 542 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 ATP13A4Q4VNC1 1196 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 CCDC178Q5BJE1 867 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 MFSD5Q6N075 450 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 FAM111BQ6SJ93 734 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 UNQ6494/PRO21346Q6UXR6 183 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 FRMD7Q6ZUT3 714 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 C1orf210Q8IVY1 113 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 SLC5A5Q92911 643 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 CSRNP2Q9H175 543 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 EMC7Q9NPA0 242 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 NCDNQ9UBB6 729 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 SIGLEC1Q9BZZ2 1709 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 UBE2QL1A1L167 161 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 CLSTN1O94985 981 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 FSHBP01225 129 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 PFKMP08237 780 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 HSD3B2P26439 372 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 SOX5P35711 763 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 KIR2DL3P43628 341 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 NPEPPSP55786 919 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 PTH1RQ03431 593 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 MIIPQ5JXC2 388 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 ZBTB41Q5SVQ8 909 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 CXorf67Q86X51 503 aaPredicted RBP2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 RSAD2Q8WXG1 361 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 EXTL1Q92935 676 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 MIEF2Q96C03 454 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 ZNF496Q96IT1 587 aaPredicted RBP2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 APOBEC2Q9Y235 224 aaKnown RBP2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 SH3BP1Q9Y3L3 701 aa2.27□□□□□ -2.05
CCDC144A-201ENST00000328495 ZFYVE16Q7Z3T8 1539 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 ULK1O75385 1050 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 IPO13O94829 963 aaKnown RBP2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 GAAP10253 952 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 ELAVL1Q15717 326 aaKnown RBP2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 FKBP15Q5T1M5 1219 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 LMBR1LQ6UX01 489 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 ZNF662Q6ZS27 426 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 DDX46Q7L014 1031 aaKnown RBP2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 GLB1L2Q8IW92 636 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 CMTM4Q8IZR5 234 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 TTC1Q99614 292 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 KRTAP4-5Q9BYR2 181 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 IFT22Q9H7X7 185 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 USP18Q9UMW8 372 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 NOC2LQ9Y3T9 749 aaKnown RBP2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 CUL7Q14999 1698 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 A0A0A6YYK5 440 aaPredicted RBP2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 KRTAP23-1A1A580 65 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 CYR61O00622 381 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 ZEB2O60315 1214 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 ALDH1A2O94788 518 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 BPIP17213 487 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 MANFP55145 182 aaKnown RBP2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 PPARAQ07869 468 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 CNGB1Q14028 1251 aaPredicted RBP2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 SPIDRQ14159 915 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 BROXQ5VW32 411 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 SDE2Q6IQ49 451 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 RASSF3Q86WH2 238 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 SLC16A11Q8NCK7 471 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 PPP1R14CQ8TAE6 165 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 GAB3Q8WWW8 586 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 SOX7Q9BT81 388 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 PPP2R3BQ9Y5P8 575 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 NUMBLQ9Y6R0 609 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 LTBP1Q14766 1721 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 AKAP8O43823 692 aaKnown RBP2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 MFAP3LO75121 409 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 TOMM70O94826 608 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 SEC24DO94855 1032 aaPredicted RBP2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 ZNF202O95125 648 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 MAN2A2P49641 1150 aa2.26□□□□□ -2.05
CCDC144A-201ENST00000328495 SESN3P58005 492 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms