RNA–Protein interactions for RNA: ENST00000327047.5

CLRN1-202, Transcript of clarin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN1, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-202ENST00000327047 PCMTD2Q9NV79 361 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 LMCD1Q9NZU5 365 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 PRKAG3Q9UGI9 489 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 PTPN22Q9Y2R2 807 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 SYNGAP1Q96PV0 1343 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 ENTPD5O75356 428 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 ITGBL1O95965 494 aaPredicted RBP7.88□□□□□ -1.15
CLRN1-202ENST00000327047 AFPP02771 609 aaKnown RBP7.88□□□□□ -1.15
CLRN1-202ENST00000327047 SERPINB2P05120 415 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 GOLGA8HP0CJ92 632 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 UCHL3P15374 230 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 HOXA10P31260 410 aaPredicted RBP7.88□□□□□ -1.15
CLRN1-202ENST00000327047 COASYQ13057 564 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 MAPK7Q13164 816 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 CUL3Q13618 768 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 LBRQ14739 615 aaKnown RBP7.88□□□□□ -1.15
CLRN1-202ENST00000327047 SLC35G1Q2M3R5 365 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 C12orf60Q5U649 245 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 ZNF449Q6P9G9 518 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 SEPT14Q6ZU15 432 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 KSR1Q8IVT5 923 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 TRIM59Q8IWR1 403 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 FAM13CQ8NE31 585 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 PRR7Q8TB68 274 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 ASAP3Q8TDY4 903 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 ZFAND2BQ8WV99 257 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 KIFAP3Q92845 792 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 ERP27Q96DN0 273 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 SNX27Q96L92 541 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 CRNKL1Q9BZJ0 848 aaKnown RBP7.88□□□□□ -1.15
CLRN1-202ENST00000327047 GRHL1Q9NZI5 618 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 TMOD4Q9NZQ9 345 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 MTRF1LQ9UGC7 380 aaKnown RBP7.88□□□□□ -1.15
CLRN1-202ENST00000327047 CNOT7Q9UIV1 285 aaKnown RBP7.88□□□□□ -1.15
CLRN1-202ENST00000327047 RASAL2Q9UJF2 1139 aa7.88□□□□□ -1.15
CLRN1-202ENST00000327047 DDX3YO15523 660 aaKnown RBP7.87□□□□□ -1.15
CLRN1-202ENST00000327047 CYTH3O43739 400 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 ATG7O95352 703 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 ACADSP16219 412 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 EPHB2P29323 1055 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 STX2P32856 288 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 GALCP54803 685 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 NAPAP54920 295 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 MPP2Q14168 576 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 TNIP1Q15025 636 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 NONOQ15233 471 aaKnown RBP eCLIP7.87□□□□□ -1.15
CLRN1-202ENST00000327047 SGSM1Q2NKQ1 1148 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 ZCWPW2Q504Y3 356 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 LRRC23Q53EV4 343 aaPredicted RBP7.87□□□□□ -1.15
CLRN1-202ENST00000327047 FOXB2Q5VYV0 432 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 GJB7Q6PEY0 223 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 VSTM1Q6UX27 236 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 INTS8Q75QN2 995 aaKnown RBP7.87□□□□□ -1.15
CLRN1-202ENST00000327047 NEK8Q86SG6 692 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 TRIM74Q86UV6 250 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 TRIM73Q86UV7 250 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 PNMA1Q8ND90 353 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 SLC35G2Q8TBE7 412 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 TBCKQ8TEA7 893 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 SH3RF3Q8TEJ3 882 aaPredicted RBP7.87□□□□□ -1.15
CLRN1-202ENST00000327047 CKAP2Q8WWK9 683 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 RAD54LQ92698 747 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 FAM122AQ96E09 287 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 RBM41Q96IZ5 413 aaKnown RBP7.87□□□□□ -1.15
CLRN1-202ENST00000327047 FGD4Q96M96 766 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 PAIP2Q9BPZ3 127 aaKnown RBP7.87□□□□□ -1.15
CLRN1-202ENST00000327047 TMX4Q9H1E5 349 aaPredicted RBP7.87□□□□□ -1.15
CLRN1-202ENST00000327047 VCXQ9H320 206 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 TXLNGQ9NUQ3 528 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 BARHL2Q9NY43 387 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 ARMCX3Q9UH62 379 aaPredicted RBP7.87□□□□□ -1.15
CLRN1-202ENST00000327047 TBK1Q9UHD2 729 aa7.87□□□□□ -1.15
CLRN1-202ENST00000327047 SPDYE16A6NNV3 312 aaPredicted RBP7.86□□□□□ -1.15
CLRN1-202ENST00000327047 SMAPO00193 183 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 POLRMTO00411 1230 aaKnown RBP7.86□□□□□ -1.15
CLRN1-202ENST00000327047 IL1R1P14778 569 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 RCN2Q14257 317 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 TNFAIP8L3Q5GJ75 292 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 OR52E8Q6IFG1 317 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 BTNL9Q6UXG8 535 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 CTU1Q7Z7A3 348 aaKnown RBP7.86□□□□□ -1.15
CLRN1-202ENST00000327047 CROCCP2Q86T23 111 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.86□□□□□ -1.15
CLRN1-202ENST00000327047 FAM81AQ8TBF8 368 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 WDR66Q8TBY9 1149 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 SNX29Q8TEQ0 813 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 DYNLL2Q96FJ2 89 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 UIMC1Q96RL1 719 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 KIAA1683Q9H0B3 1180 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 ZHX3Q9H4I2 956 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 CD209Q9NNX6 404 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 DNAJC17Q9NVM6 304 aaKnown RBP7.86□□□□□ -1.15
CLRN1-202ENST00000327047 BIN2Q9UBW5 565 aaPredicted RBP7.86□□□□□ -1.15
CLRN1-202ENST00000327047 POLLQ9UGP5 575 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 MAD2L2Q9UI95 211 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 AJAP1Q9UKB5 411 aaPredicted RBP7.86□□□□□ -1.15
CLRN1-202ENST00000327047 BZW2Q9Y6E2 419 aaKnown RBP7.86□□□□□ -1.15
CLRN1-202ENST00000327047 RPS6KL1Q9Y6S9 549 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 PFASO15067 1338 aa7.86□□□□□ -1.15
CLRN1-202ENST00000327047 FER1L6Q2WGJ9 1857 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms