RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 MYBP10242 640 aa11.58□□□□□ -0.55
SNRNP200-201ENST00000323853 SMARCA1P28370 1054 aa11.58□□□□□ -0.55
SNRNP200-201ENST00000323853 DRP2Q13474 957 aa11.58□□□□□ -0.55
SNRNP200-201ENST00000323853 KYAT1Q16773 422 aa11.58□□□□□ -0.55
SNRNP200-201ENST00000323853 HEATR6Q6AI08 1181 aaKnown RBP11.58□□□□□ -0.55
SNRNP200-201ENST00000323853 IFT43Q96FT9 208 aa11.58□□□□□ -0.55
SNRNP200-201ENST00000323853 SENP2Q9HC62 589 aa11.58□□□□□ -0.55
SNRNP200-201ENST00000323853 FAM217BQ9NTX9 383 aaPredicted RBP11.58□□□□□ -0.55
SNRNP200-201ENST00000323853 HPCAL4Q9UM19 191 aa11.58□□□□□ -0.55
SNRNP200-201ENST00000323853 PI4K2BG5E9Z4 385 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 APOL1O14791 398 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 RFX5P48382 616 aaPredicted RBP11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 ARFIP2P53365 341 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 POLE2P56282 527 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 OCRLQ01968 901 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 GUCY1A3Q02108 690 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 TTLL4Q14679 1199 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 GRAMD1BQ3KR37 738 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 RGS9BPQ6ZS82 235 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 TTC39CQ8N584 583 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 GIPC2Q8TF65 315 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 SCG3Q8WXD2 468 aaKnown RBP11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 CCDC138Q96M89 665 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 LRRC37BQ96QE4 947 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 FAM8A1Q9UBU6 413 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 INPP1P49441 399 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 ARSEP51690 589 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 E2F4Q16254 413 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 PPM1NQ8N819 430 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 VPS39Q96JC1 886 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 EPN3Q9H201 632 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 IL25Q9H293 177 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 AGPAT5Q9NUQ2 364 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 GTSE1Q9NYZ3 720 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 DAGLAQ9Y4D2 1042 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 NCOA3Q9Y6Q9 1424 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 SSU72P8A0A1W2PR75 194 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 CFAP73A6NFT4 308 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 MYMKA6NI61 221 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 PSMD14O00487 310 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 ADORA2BP29275 332 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 C1orf146Q5VVC0 180 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 FRA10AC1Q70Z53 315 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 CYFIP1Q7L576 1253 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 ZC3H18Q86VM9 953 aaKnown RBP11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 RCOR2Q8IZ40 523 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 SPATA33Q96N06 139 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 FXR1P51114 621 aaKnown RBP eCLIP11.58□□□□□ -0.569e-7■■■■□ 20.3
SNRNP200-201ENST00000323853 TBC1D16Q8TBP0 767 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.58□□□□□ -0.562e-7■■■■■ 32.7
SNRNP200-201ENST00000323853 GRAMD1AQ96CP6 724 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 SMYD3Q9H7B4 428 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 RGL1Q9NZL6 768 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 A0A0G2JLW4 131 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 TBX3O15119 743 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 PFDN1O60925 122 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 DNAJC8O75937 253 aaPredicted RBP11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 CAMTA2O94983 1202 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 KLK7P49862 253 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 NFIXQ14938 502 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 KIAA1841Q6NSI8 718 aa11.58□□□□□ -0.56
SNRNP200-201ENST00000323853 FOXP2O15409 715 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 MCF2P10911 925 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 MDH1P40925 334 aaKnown RBP11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 DEUP1Q05D60 604 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 KIAA1755Q5JYT7 1200 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 TMTC4Q5T4D3 741 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 CXorf38Q8TB03 319 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 IRX2Q9BZI1 471 aaPredicted RBP11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 HPS5Q9UPZ3 1129 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 PCDHA10Q9Y5I2 948 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 KDM6AO15550 1401 aaPredicted RBP11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 KIAA0391O15091 583 aaKnown RBP11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 AGTP01019 485 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 FDX1P10109 184 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 PYGBP11216 843 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 ZFXP17010 805 aaPredicted RBP11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 STAT4Q14765 748 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 RAD9BQ6WBX8 426 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 SUDS3Q9H7L9 328 aaPredicted RBP11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 MRPL40Q9NQ50 206 aaKnown RBP11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 SPDYE2BA6NHP3 402 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 CHUKO15111 745 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 SPDYE6P0CI01 402 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 PDCD2Q16342 344 aaPredicted RBP11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 FAM102AQ5T9C2 384 aaPredicted RBP11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 HIPK4Q8NE63 616 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 H0Y3Z8 333 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 EEF1B2P24534 225 aaKnown RBP11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 FMO5P49326 533 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 SF3B3Q15393 1217 aaKnown RBP11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 ZC3H15Q8WU90 426 aaKnown RBP11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 ZBTB18Q99592 522 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 KCND2Q9NZV8 630 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 DCTN4Q9UJW0 460 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 INPP5FQ9Y2H2 1132 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 DIP2BQ9P265 1576 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 PPP1R3GB7ZBB8 358 aa11.57□□□□□ -0.56
SNRNP200-201ENST00000323853 SNX2O60749 519 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms