RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 ZFYVE27Q5T4F4 411 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 SPATA21Q7Z572 469 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 SHKBP1Q8TBC3 707 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 LRRN4Q8WUT4 740 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 CPA5Q8WXQ8 436 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 EDEM3Q9BZQ6 932 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 SWAP70Q9UH65 585 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 DOT1LQ8TEK3 1739 aa10.32□□□□□ -0.76
RPGR-201ENST00000318842 DPPA5A6NC42 116 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 TTLL1O95922 423 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 LINGO3P0C6S8 592 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 BMP3P12645 472 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 CD58P19256 250 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 CPA2P48052 419 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 RRP1BQ14684 758 aaKnown RBP10.31□□□□□ -0.76
RPGR-201ENST00000318842 TMEM63BQ5T3F8 832 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 CAPRIN2Q6IMN6 1127 aaKnown RBP10.31□□□□□ -0.76
RPGR-201ENST00000318842 TPTE2Q6XPS3 522 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 FRMD5Q7Z6J6 570 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 AGPAT1Q99943 283 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 ZSWIM1Q9BR11 485 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 WDR18Q9BV38 432 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 OSBPL1AQ9BXW6 950 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 KIAA1683Q9H0B3 1180 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 SLC5A4Q9NY91 659 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 SAE1Q9UBE0 346 aaPredicted RBP10.31□□□□□ -0.76
RPGR-201ENST00000318842 LAMB1P07942 1786 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 GSTTP1A0A1W2PQM5 241 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 DDTLA6NHG4 134 aaPredicted RBP10.31□□□□□ -0.76
RPGR-201ENST00000318842 A6NNZ2 444 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 IRF6O14896 467 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 THAP12O43422 761 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 PHF2O75151 1096 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 KRT10P13645 584 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 RRM1P23921 792 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 SLC8A1P32418 973 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 COILP38432 576 aaPredicted RBP10.31□□□□□ -0.76
RPGR-201ENST00000318842 DGKZQ13574 1117 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 TUBB8Q3ZCM7 444 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 EPM2AIP1Q7L775 607 aaPredicted RBP10.31□□□□□ -0.76
RPGR-201ENST00000318842 ZNF483Q8TF39 744 aaPredicted RBP10.31□□□□□ -0.76
RPGR-201ENST00000318842 POMGNT1Q8WZA1 660 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 SEC14L1Q92503 715 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 SEMA4DQ92854 862 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 ZNF653Q96CK0 615 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 LZTS2Q9BRK4 669 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 NT5C3AQ9H0P0 336 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 TYW1Q9NV66 732 aaKnown RBP10.31□□□□□ -0.76
RPGR-201ENST00000318842 ABCB11O95342 1321 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 GPR75-ASB3A0A0A6YYF3 556 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 A0A1W2PPM1 405 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 CALUO43852 315 aaPredicted RBP10.31□□□□□ -0.76
RPGR-201ENST00000318842 GNA14O95837 355 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 PRKCIP41743 596 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 RAD23BP54727 409 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 WDR4P57081 412 aaKnown RBP10.31□□□□□ -0.76
RPGR-201ENST00000318842 IFI16Q16666 785 aaKnown RBP10.31□□□□□ -0.76
RPGR-201ENST00000318842 RNF220Q5VTB9 566 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 ANKMY2Q8IV38 441 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 TMEM130Q8N3G9 435 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 ANKRD2Q9GZV1 360 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 EBF2Q9HAK2 575 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 AGPAT3Q9NRZ7 376 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 SERPINB13Q9UIV8 391 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 TRAF3IP3Q9Y228 551 aa10.31□□□□□ -0.76
RPGR-201ENST00000318842 ATF5Q9Y2D1 282 aaPredicted RBP10.31□□□□□ -0.76
RPGR-201ENST00000318842 TMEM253P0C7T8 217 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 FERP16591 822 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 ADCY8P40145 1251 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 ECE1P42892 770 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 MARSP56192 900 aaKnown RBP10.3□□□□□ -0.76
RPGR-201ENST00000318842 SP4Q02446 784 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 SIX1Q15475 284 aaPredicted RBP10.3□□□□□ -0.76
RPGR-201ENST00000318842 EDRF1Q3B7T1 1238 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 SGO2Q562F6 1265 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 VSIG1Q86XK7 387 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 FAM178BQ8IXR5 827 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 SYT2Q8N9I0 419 aaPredicted RBP10.3□□□□□ -0.76
RPGR-201ENST00000318842 IQCDQ96DY2 449 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 BORCS6Q96GS4 357 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 PPP1R12CQ9BZL4 782 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 NOP53Q9NZM5 478 aaKnown RBP10.3□□□□□ -0.76
RPGR-201ENST00000318842 APEX2Q9UBZ4 518 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 NAALADL1Q9UQQ1 740 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 NUDT17P0C025 328 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 NOP14P78316 857 aaKnown RBP10.3□□□□□ -0.76
RPGR-201ENST00000318842 CRYMQ14894 314 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 CERKLQ49MI3 558 aaPredicted RBP10.3□□□□□ -0.76
RPGR-201ENST00000318842 SYCE1Q8N0S2 351 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 CNOT10Q9H9A5 744 aaKnown RBP10.3□□□□□ -0.76
RPGR-201ENST00000318842 DBNDD1Q9H9R9 158 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 TELO2Q9Y4R8 837 aa10.3□□□□□ -0.76
RPGR-201ENST00000318842 ASAP2O43150 1006 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 ARP10275 920 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 PSMC2P35998 433 aaKnown RBP10.29□□□□□ -0.76
RPGR-201ENST00000318842 PEX5P50542 639 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 BNIP1Q12981 228 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 SLFN13Q68D06 897 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 SLC13A5Q86YT5 568 aaPredicted RBP10.29□□□□□ -0.76
RPGR-201ENST00000318842 ZNF564Q8TBZ8 553 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms