RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 KRT13P13646 458 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 HOXA7P31268 230 aaPredicted RBP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 MARSP56192 900 aaKnown RBP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 GHRHRQ02643 423 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 EMC2Q15006 297 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 CCL15Q16663 113 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 RNF187Q5TA31 235 aaPredicted RBP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 TAS1R3Q7RTX0 852 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 CCDC170Q8IYT3 715 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 AENQ8WTP8 325 aaKnown RBP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 U2AF1L4Q8WU68 220 aaKnown RBP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 SLC20A1Q8WUM9 679 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 SLC7A3Q8WY07 619 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 SEMA4DQ92854 862 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 LENG1Q96BZ8 264 aaPredicted RBP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 NLRP4Q96MN2 994 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 NMRK2Q9NPI5 230 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 SEL1LQ9UBV2 794 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 FBXO40Q9UH90 709 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 BTBD19C9JJ37 291 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 H0YHG0 523 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 SERPING1P05155 500 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 ZNF286BP0CG31 522 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 ERVK-9P63128 1117 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 ASTE1Q2TB18 679 aaPredicted RBP8.22□□□□□ -1.09
TRIM55-202ENST00000315962 C1orf220Q5T0J3 134 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 SPOPLQ6IQ16 392 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 KCNV1Q6PIU1 500 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 CNPY4Q8N129 248 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 NEK9Q8TD19 979 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 PRPF31Q8WWY3 499 aaKnown RBP8.22□□□□□ -1.09
TRIM55-202ENST00000315962 RNPC3Q96LT9 517 aaKnown RBP8.22□□□□□ -1.09
TRIM55-202ENST00000315962 FGD4Q96M96 766 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 KRT12Q99456 494 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 STRA6Q9BX79 667 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 INTS2Q9H0H0 1204 aaKnown RBP8.22□□□□□ -1.09
TRIM55-202ENST00000315962 RNPEPQ9H4A4 650 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 METTL14Q9HCE5 456 aaKnown RBP8.22□□□□□ -1.09
TRIM55-202ENST00000315962 DMAC2Q9NW81 257 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 KCND2Q9NZV8 630 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 TRPC6Q9Y210 931 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 TACC1O75410 805 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 PALMO75781 387 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 HEXIM1O94992 359 aaKnown RBP8.22□□□□□ -1.09
TRIM55-202ENST00000315962 OATP04181 439 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 GTF2BQ00403 316 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 NNTQ13423 1086 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 MKRN4PQ13434 485 aaPredicted RBP8.22□□□□□ -1.09
TRIM55-202ENST00000315962 ALKBH5Q6P6C2 394 aaKnown RBP8.22□□□□□ -1.09
TRIM55-202ENST00000315962 MAATS1Q7Z4T9 603 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 RHPN2Q8IUC4 686 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 TAS1R2Q8TE23 839 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 TMEM117Q9H0C3 514 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 ATP6V0A4Q9HBG4 840 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 OSGEPQ9NPF4 335 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 PPANQ9NQ55 473 aaKnown RBP8.22□□□□□ -1.09
TRIM55-202ENST00000315962 DOCK5Q9H7D0 1870 aa8.22□□□□□ -1.09
TRIM55-202ENST00000315962 COL11A1P12107 1806 aaPredicted RBP8.22□□□□□ -1.09
TRIM55-202ENST00000315962 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.21□□□□□ -1.09
TRIM55-202ENST00000315962 K7ERI5 159 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 EIF3HO15372 352 aaKnown RBP eCLIP8.21□□□□□ -1.09
TRIM55-202ENST00000315962 MAFGO15525 162 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 ATMINO43313 823 aaPredicted RBP8.21□□□□□ -1.09
TRIM55-202ENST00000315962 RPS6KA5O75582 802 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 DGAT1O75907 488 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 TNNI1P19237 187 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 GLRA2P23416 452 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 ADORA2AP29274 412 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 HNRNPH3P31942 346 aaKnown RBP8.21□□□□□ -1.09
TRIM55-202ENST00000315962 ADCYAP1R1P41586 468 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 LIG4P49917 911 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 CLCN3P51790 818 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 NLRP11P59045 1033 aaKnown RBP8.21□□□□□ -1.09
TRIM55-202ENST00000315962 TMEM62Q0P6H9 643 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 SNAPC2Q13487 334 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 TUBB2AQ13885 445 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 HLTFQ14527 1009 aaKnown RBP eCLIP8.21□□□□□ -1.09
TRIM55-202ENST00000315962 XKR3Q5GH77 459 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 ZC3H3Q8IXZ2 948 aaKnown RBP8.21□□□□□ -1.09
TRIM55-202ENST00000315962 DNERQ8NFT8 737 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 BRI3BPQ8WY22 251 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 TATDN2Q93075 761 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 PTPN18Q99952 460 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 TUBB2BQ9BVA1 445 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 HAPLN2Q9GZV7 340 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 AZI2Q9H6S1 392 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 TMEM206Q9H813 350 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 CPA4Q9UI42 421 aa8.21□□□□□ -1.09
TRIM55-202ENST00000315962 F8VZ95 297 aa8.21□□□□□ -1.1
TRIM55-202ENST00000315962 CXCL11O14625 94 aa8.21□□□□□ -1.1
TRIM55-202ENST00000315962 HSF2BPO75031 334 aa8.21□□□□□ -1.1
TRIM55-202ENST00000315962 MYCNP04198 464 aaPredicted RBP8.21□□□□□ -1.1
TRIM55-202ENST00000315962 MAPTP10636 758 aaKnown RBP8.21□□□□□ -1.1
TRIM55-202ENST00000315962 PPIL2Q13356 520 aa8.21□□□□□ -1.1
TRIM55-202ENST00000315962 SLC18A3Q16572 532 aa8.21□□□□□ -1.1
TRIM55-202ENST00000315962 TMEM132AQ24JP5 1023 aa8.21□□□□□ -1.1
TRIM55-202ENST00000315962 ADAT2Q7Z6V5 191 aaKnown RBP8.21□□□□□ -1.1
TRIM55-202ENST00000315962 RNF149Q8NC42 400 aa8.21□□□□□ -1.1
TRIM55-202ENST00000315962 DEPTORQ8TB45 409 aa8.21□□□□□ -1.1
TRIM55-202ENST00000315962 CDHR1Q96JP9 859 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms