RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 PNMA3Q9UL41 463 aa9.91□□□□□ -0.82
BDNF-201ENST00000314915 NEDD4P46934 1319 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 CDK12Q9NYV4 1490 aaPredicted RBP9.9□□□□□ -0.82
BDNF-201ENST00000314915 ENTPD5O75356 428 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 STAT3P40763 770 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 PPP2R2BQ00005 443 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 LAPTM5Q13571 262 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 PTK2BQ14289 1009 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 RRS1Q15050 365 aaKnown RBP9.9□□□□□ -0.82
BDNF-201ENST00000314915 NFE2Q16621 373 aaPredicted RBP9.9□□□□□ -0.82
BDNF-201ENST00000314915 MOGQ16653 247 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 CFAP221Q4G0U5 840 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 KIAA1841Q6NSI8 718 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 BLOC1S2Q6QNY1 142 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 USP43Q70EL4 1123 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 TBC1D16Q8TBP0 767 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 PRICKLE1Q96MT3 831 aaPredicted RBP9.9□□□□□ -0.82
BDNF-201ENST00000314915 LPIN3Q9BQK8 851 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 MYH13Q9UKX3 1938 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 CYLC1P35663 651 aaPredicted RBP9.9□□□□□ -0.82
BDNF-201ENST00000314915 ECE1P42892 770 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 MMP13P45452 471 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 HAAOP46952 286 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 OLR1P78380 273 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 TRAP1Q12931 704 aaKnown RBP9.9□□□□□ -0.82
BDNF-201ENST00000314915 ZNF600Q6ZNG1 722 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 NLRP7Q8WX94 980 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 CCDC77Q9BR77 488 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 RUBCNLQ9H714 662 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 AK5Q9Y6K8 562 aa9.9□□□□□ -0.82
BDNF-201ENST00000314915 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.9□□□□□ -0.82
BDNF-201ENST00000314915 XPOTO43592 962 aaKnown RBP9.9□□□□□ -0.83
BDNF-201ENST00000314915 P4HA1P13674 534 aa9.9□□□□□ -0.83
BDNF-201ENST00000314915 RGS21Q2M5E4 152 aa9.9□□□□□ -0.83
BDNF-201ENST00000314915 SH3BP5LQ7L8J4 393 aa9.9□□□□□ -0.83
BDNF-201ENST00000314915 CNTROBQ8N137 903 aa9.9□□□□□ -0.83
BDNF-201ENST00000314915 MDM1Q8TC05 714 aa9.9□□□□□ -0.83
BDNF-201ENST00000314915 DDI1Q8WTU0 396 aa9.9□□□□□ -0.83
BDNF-201ENST00000314915 UBAC1Q9BSL1 405 aa9.9□□□□□ -0.83
BDNF-201ENST00000314915 TBC1D10AQ9BXI6 508 aa9.9□□□□□ -0.83
BDNF-201ENST00000314915 STXBP5LQ9Y2K9 1186 aa9.9□□□□□ -0.83
BDNF-201ENST00000314915 RBMX2Q9Y388 322 aaKnown RBP9.9□□□□□ -0.83
BDNF-201ENST00000314915 MUSKO15146 869 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 HMOX1P09601 288 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 HOXB1P14653 301 aaPredicted RBP9.89□□□□□ -0.83
BDNF-201ENST00000314915 IGHMBP2P38935 993 aaKnown RBP9.89□□□□□ -0.83
BDNF-201ENST00000314915 PBX1P40424 430 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 SYKP43405 635 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 GRIN1Q05586 938 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 ASPHQ12797 758 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 STK4Q13043 487 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 RWDD4Q6NW29 188 aaKnown RBP9.89□□□□□ -0.83
BDNF-201ENST00000314915 NUP88Q99567 741 aaPredicted RBP9.89□□□□□ -0.83
BDNF-201ENST00000314915 CDCA7Q9BWT1 371 aaPredicted RBP9.89□□□□□ -0.83
BDNF-201ENST00000314915 PLK2Q9NYY3 685 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 GGT7Q9UJ14 662 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 RNF17Q9BXT8 1623 aaKnown RBP9.89□□□□□ -0.83
BDNF-201ENST00000314915 ZNF518AQ6AHZ1 1483 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 SEMA3EO15041 775 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 AQP9O43315 295 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 EYA4O95677 639 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 PTGS2P35354 604 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 PHKA2P46019 1235 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 ACVR2BQ13705 512 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 PPP4R4Q6NUP7 873 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 VPS35Q96QK1 796 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 ECSITQ9BQ95 431 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 AIPL1Q9NZN9 384 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 SLC45A1Q9Y2W3 748 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 TRAFD1O14545 582 aaPredicted RBP9.89□□□□□ -0.83
BDNF-201ENST00000314915 SULT1B1O43704 296 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 GMNNO75496 209 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 PSMG1O95456 288 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 CSTF2P33240 577 aaKnown RBP eCLIP9.89□□□□□ -0.83
BDNF-201ENST00000314915 EVI2BP34910 448 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 C4orf50Q6ZRC1 276 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 TTLL11Q8NHH1 800 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 UBLCP1Q8WVY7 318 aaPredicted RBP9.89□□□□□ -0.83
BDNF-201ENST00000314915 NRG4Q8WWG1 115 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 RNF38Q9H0F5 515 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 RRN3Q9NYV6 651 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 MAP3K19Q56UN5 1328 aa9.89□□□□□ -0.83
BDNF-201ENST00000314915 PNMA6EA0A0J9YXQ4 647 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 AP1G1O43747 822 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 CLPTM1O96005 669 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 FLIIQ13045 1269 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 ABTB2Q8N961 1025 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 FAM20AQ96MK3 541 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 ISCUQ9H1K1 167 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 RGS13O14921 159 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 GNPATO15228 680 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 CCNT1O60563 726 aaKnown RBP9.88□□□□□ -0.83
BDNF-201ENST00000314915 OR6B1O95007 311 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 GNL1P36915 607 aaPredicted RBP9.88□□□□□ -0.83
BDNF-201ENST00000314915 GNG2P59768 71 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 ADAM17P78536 824 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 TAGLNQ01995 201 aaKnown RBP9.88□□□□□ -0.83
BDNF-201ENST00000314915 PRKCEQ02156 737 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 SPDYAQ5MJ70 313 aa9.88□□□□□ -0.83
BDNF-201ENST00000314915 C6orf118Q5T5N4 469 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms