RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 CCDC110Q8TBZ0 833 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 PABPC3Q9H361 631 aaKnown RBP12.11□□□□□ -0.47
PHTF2-203ENST00000307305 TLR3O15455 904 aaKnown RBP12.11□□□□□ -0.47
PHTF2-203ENST00000307305 PJA2O43164 708 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 PHF2O75151 1096 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 TMEM253P0C7T8 217 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 PYGMP11217 842 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 QARSP47897 775 aaKnown RBP12.11□□□□□ -0.47
PHTF2-203ENST00000307305 ITGA8P53708 1063 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 TMEM119Q4V9L6 283 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 LLGL2Q6P1M3 1020 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 NLGN1Q8N2Q7 840 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 SYN2Q92777 582 aaPredicted RBP12.11□□□□□ -0.47
PHTF2-203ENST00000307305 IGF2BP3O00425 579 aaKnown RBP eCLIP12.11□□□□□ -0.47
PHTF2-203ENST00000307305 HSPA9P38646 679 aaKnown RBP12.11□□□□□ -0.47
PHTF2-203ENST00000307305 ORC2Q13416 577 aaPredicted RBP12.11□□□□□ -0.47
PHTF2-203ENST00000307305 DNAJC24Q6P3W2 148 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 RFX6Q8HWS3 928 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 ARHGEF19Q8IW93 802 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 LMNTD2Q8IXW0 634 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 TXNDC16Q9P2K2 825 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 TPX2Q9ULW0 747 aaKnown RBP12.11□□□□□ -0.47
PHTF2-203ENST00000307305 MYH13Q9UKX3 1938 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 UBOX5O94941 541 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 RPL21P46778 160 aaKnown RBP12.1□□□□□ -0.47
PHTF2-203ENST00000307305 IRF2BP2Q7Z5L9 587 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 DTX3LQ8TDB6 740 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 HSPH1Q92598 858 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 CNKSR1Q969H4 720 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 SGSM3Q96HU1 749 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 PCDHGC5Q9Y5F6 944 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 FAM187AA6NFU0 413 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 INO80B-WBP1J3KQ70 363 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 NOP56O00567 594 aaKnown RBP12.1□□□□□ -0.47
PHTF2-203ENST00000307305 HSPA6P17066 643 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 SEMA3FQ13275 785 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 KRT39Q6A163 491 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 MAML1Q92585 1016 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 PRMT6Q96LA8 375 aaPredicted RBP12.1□□□□□ -0.47
PHTF2-203ENST00000307305 INO80BQ9C086 356 aaPredicted RBP12.1□□□□□ -0.47
PHTF2-203ENST00000307305 UNC45AQ9H3U1 944 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 ERVK-5Q9HDB9 667 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 K7ERI5 159 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 OVGP1Q12889 678 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 CLUL1Q15846 466 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 SNRNP35Q16560 246 aaKnown RBP12.1□□□□□ -0.47
PHTF2-203ENST00000307305 SMTNL2Q2TAL5 461 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 ARMC9Q7Z3E5 817 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 ZNF526Q8TF50 670 aaPredicted RBP12.1□□□□□ -0.47
PHTF2-203ENST00000307305 PYROXD1Q8WU10 500 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 MAIP1Q8WWC4 291 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 SLC5A5Q92911 643 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 QTRT2Q9H974 415 aaKnown RBP12.1□□□□□ -0.47
PHTF2-203ENST00000307305 PICK1Q9NRD5 415 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 MRC1P22897 1456 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 CCDC195A0A1B0GUA6 201 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 CFAP69A5D8W1 941 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 TMEM191BP0C7N4 346 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 RALAP11233 206 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 PPATQ06203 517 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 PDIA2Q13087 525 aaKnown RBP12.1□□□□□ -0.47
PHTF2-203ENST00000307305 ITGB3BPQ13352 177 aaPredicted RBP12.1□□□□□ -0.47
PHTF2-203ENST00000307305 EPHA7Q15375 998 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 SPOPLQ6IQ16 392 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 CPNE8Q86YQ8 564 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 LNX1Q8TBB1 728 aaPredicted RBP12.1□□□□□ -0.47
PHTF2-203ENST00000307305 ALG3Q92685 438 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 PRCCQ92733 491 aaPredicted RBP12.1□□□□□ -0.47
PHTF2-203ENST00000307305 TMEM143Q96AN5 459 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 CALR3Q96L12 384 aaKnown RBP12.1□□□□□ -0.47
PHTF2-203ENST00000307305 RBM15Q96T37 977 aaKnown RBP eCLIP12.1□□□□□ -0.47
PHTF2-203ENST00000307305 UBXN6Q9BZV1 441 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 TMEM39BQ9GZU3 492 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 GANQ9H2C0 597 aa12.1□□□□□ -0.47
PHTF2-203ENST00000307305 PITPNM2Q9BZ72 1349 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 RTN2O75298 545 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 P4HBP07237 508 aaKnown RBP12.09□□□□□ -0.47
PHTF2-203ENST00000307305 YWHABP31946 246 aaKnown RBP12.09□□□□□ -0.47
PHTF2-203ENST00000307305 MAN1A1P33908 653 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 P3H1Q32P28 736 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 LRIG3Q6UXM1 1119 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 CERS5Q8N5B7 392 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 FBXL13Q8NEE6 735 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 ACTRT1Q8TDG2 376 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 ATP8B4Q8TF62 1192 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 ERP27Q96DN0 273 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 SPDL1Q96EA4 605 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 CFAP36Q96G28 342 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 ZNF277Q9NRM2 450 aaPredicted RBP12.09□□□□□ -0.47
PHTF2-203ENST00000307305 MYH15Q9Y2K3 1946 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 STAM2O75886 525 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 COILP38432 576 aaPredicted RBP12.09□□□□□ -0.47
PHTF2-203ENST00000307305 SLC12A3P55017 1021 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 DHX34Q14147 1143 aaKnown RBP12.09□□□□□ -0.47
PHTF2-203ENST00000307305 TSNAXIP1Q2TAA8 658 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 SPATA21Q7Z572 469 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 PDCD7Q8N8D1 485 aaKnown RBP12.09□□□□□ -0.47
PHTF2-203ENST00000307305 CARD9Q9H257 536 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 NOD2Q9HC29 1040 aa12.09□□□□□ -0.47
PHTF2-203ENST00000307305 KDM3BQ7LBC6 1761 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms