RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 SLFN14P0C7P3 912 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 HOXA9P31269 272 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 PREPLQ4J6C6 727 aaPredicted RBP6.47□□□□□ -1.37
ZNF440-201ENST00000304060 PRR23CQ6ZRP0 262 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 ITIH5Q86UX2 942 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 RHPN2Q8IUC4 686 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 IL31RAQ8NI17 732 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 DDX27Q96GQ7 796 aaKnown RBP6.47□□□□□ -1.37
ZNF440-201ENST00000304060 SPACA7Q96KW9 195 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 OXCT2Q9BYC2 517 aaPredicted RBP6.47□□□□□ -1.37
ZNF440-201ENST00000304060 EPC1Q9H2F5 836 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 TBC1D13Q9NVG8 400 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 KHNYNO15037 678 aaKnown RBP6.47□□□□□ -1.37
ZNF440-201ENST00000304060 LILRB3O75022 631 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 CLCN3P51790 818 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 NLRP5P59047 1200 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 SPIRE1Q08AE8 756 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 PSMD5Q16401 504 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 ANKS3Q6ZW76 656 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 TBC1D10CQ8IV04 446 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 APPL2Q8NEU8 664 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 ERMNQ8TAM6 284 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 FAM3CQ92520 227 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 IFT74Q96LB3 600 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 CASD1Q96PB1 797 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 AGO4Q9HCK5 861 aaKnown RBP6.47□□□□□ -1.37
ZNF440-201ENST00000304060 RIC8AQ9NPQ8 531 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 RIOK3O14730 519 aaKnown RBP6.47□□□□□ -1.37
ZNF440-201ENST00000304060 CAPN9O14815 690 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 AKAP3O75969 853 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 C8AP07357 584 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 ADAM17P78536 824 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 LMAN2Q12907 356 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 GRIK3Q13003 919 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 BECN1Q14457 450 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 CWF19L1Q69YN2 538 aaKnown RBP6.47□□□□□ -1.37
ZNF440-201ENST00000304060 CNPY4Q8N129 248 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 SPEM1Q8N4L4 309 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 FAM227BQ96M60 508 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 TCHPQ9BT92 498 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 CWH43Q9H720 699 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 TTC12Q9H892 705 aaPredicted RBP6.47□□□□□ -1.37
ZNF440-201ENST00000304060 LMAN1LQ9HAT1 526 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 SPTLC3Q9NUV7 552 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 MAFFQ9ULX9 164 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 LHX6Q9UPM6 363 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 PCDHB2Q9Y5E7 798 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 CCDC194A0A1B0GVG4 234 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 N4BP3O15049 544 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 ECI2O75521 394 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 CDKL5O76039 1030 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 MRPS9P82933 396 aaKnown RBP6.47□□□□□ -1.37
ZNF440-201ENST00000304060 SNW1Q13573 536 aaKnown RBP6.47□□□□□ -1.37
ZNF440-201ENST00000304060 ARHGAP29Q52LW3 1261 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 PRR16Q569H4 304 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 RASSF8Q8NHQ8 419 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 TRAPPC12Q8WVT3 735 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 UROC1Q96N76 676 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 TTPALQ9BTX7 342 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 NUSAP1Q9BXS6 441 aaKnown RBP6.47□□□□□ -1.37
ZNF440-201ENST00000304060 LNPKQ9C0E8 428 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 DNAI2Q9GZS0 605 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 ZKSCAN5Q9Y2L8 839 aa6.47□□□□□ -1.37
ZNF440-201ENST00000304060 TET1Q8NFU7 2136 aa6.46□□□□□ -1.37
ZNF440-201ENST00000304060 BDP1A6H8Y1 2624 aa6.46□□□□□ -1.37
ZNF440-201ENST00000304060 NEDD4P46934 1319 aa6.46□□□□□ -1.37
ZNF440-201ENST00000304060 CHMP2AO43633 222 aa6.46□□□□□ -1.37
ZNF440-201ENST00000304060 PPP1R37O75864 691 aa6.46□□□□□ -1.37
ZNF440-201ENST00000304060 PSMC5P62195 406 aa6.46□□□□□ -1.37
ZNF440-201ENST00000304060 PRKCEQ02156 737 aa6.46□□□□□ -1.37
ZNF440-201ENST00000304060 GRSF1Q12849 480 aaKnown RBP eCLIP6.46□□□□□ -1.37
ZNF440-201ENST00000304060 USP39Q53GS9 565 aaKnown RBP6.46□□□□□ -1.37
ZNF440-201ENST00000304060 ARMCX5Q6P1M9 558 aa6.46□□□□□ -1.37
ZNF440-201ENST00000304060 MICU3Q86XE3 530 aa6.46□□□□□ -1.37
ZNF440-201ENST00000304060 STAG2Q8N3U4 1231 aa6.46□□□□□ -1.37
ZNF440-201ENST00000304060 SLC22A17Q8WUG5 538 aa6.46□□□□□ -1.37
ZNF440-201ENST00000304060 NUMBLQ9Y6R0 609 aa6.46□□□□□ -1.37
ZNF440-201ENST00000304060 RALGAPA2Q2PPJ7 1873 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 A0A0D9SFI3 127 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 CCDC66A2RUB6 948 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 KRT37O76014 449 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 CNPP09543 421 aaKnown RBP6.46□□□□□ -1.38
ZNF440-201ENST00000304060 TRIM21P19474 475 aaKnown RBP6.46□□□□□ -1.38
ZNF440-201ENST00000304060 SLC11A1P49279 550 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 LIMK1P53667 647 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 EPHB3P54753 998 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 FOXC1Q12948 553 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 JAKMIP3Q5VZ66 844 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 DCLK2Q8N568 766 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 ZCCHC14Q8WYQ9 949 aaKnown RBP6.46□□□□□ -1.38
ZNF440-201ENST00000304060 MTMR8Q96EF0 704 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 CEP170P1Q96L14 293 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 NT5C3AQ9H0P0 336 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 NRDE2Q9H7Z3 1164 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 ASAH2Q9NR71 780 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 OGFRQ9NZT2 677 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 SCN5AQ14524 2016 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 SALL3Q9BXA9 1300 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 REC8O95072 547 aa6.46□□□□□ -1.38
ZNF440-201ENST00000304060 PAX3P23760 479 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms