RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 KYNUQ16719 465 aa11.66□□□□□ -0.54
ZNF558-201ENST00000301475 CBWD6Q4V339 395 aa11.66□□□□□ -0.54
ZNF558-201ENST00000301475 CBWD3Q5JTY5 395 aa11.66□□□□□ -0.54
ZNF558-201ENST00000301475 CBWD5Q5RIA9 395 aa11.66□□□□□ -0.54
ZNF558-201ENST00000301475 ZNF449Q6P9G9 518 aa11.66□□□□□ -0.54
ZNF558-201ENST00000301475 RHBDF2Q6PJF5 856 aa11.66□□□□□ -0.54
ZNF558-201ENST00000301475 FAM43BQ6ZT52 329 aaPredicted RBP11.66□□□□□ -0.54
ZNF558-201ENST00000301475 SLC51AQ86UW1 340 aa11.66□□□□□ -0.54
ZNF558-201ENST00000301475 UBL4BQ8N7F7 174 aa11.66□□□□□ -0.54
ZNF558-201ENST00000301475 ZNF713Q8N859 430 aaPredicted RBP11.66□□□□□ -0.54
ZNF558-201ENST00000301475 DNAJC9Q8WXX5 260 aa11.66□□□□□ -0.54
ZNF558-201ENST00000301475 PWWP2AQ96N64 755 aa11.66□□□□□ -0.54
ZNF558-201ENST00000301475 TAOK3Q9H2K8 898 aa11.66□□□□□ -0.54
ZNF558-201ENST00000301475 DENND2DQ9H6A0 471 aaPredicted RBP11.66□□□□□ -0.54
ZNF558-201ENST00000301475 DLGAP2Q9P1A6 1054 aa11.66□□□□□ -0.54
ZNF558-201ENST00000301475 ADGRA3Q8IWK6 1321 aa11.66□□□□□ -0.54
ZNF558-201ENST00000301475 A0A1B0GVG6 124 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 TNFAIP3P21580 790 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 POLD1P28340 1107 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 YARSP54577 528 aaKnown RBP11.65□□□□□ -0.54
ZNF558-201ENST00000301475 CALCOCO2Q13137 446 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 SF3B3Q15393 1217 aaKnown RBP11.65□□□□□ -0.54
ZNF558-201ENST00000301475 ARHGAP44Q17R89 818 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 SEL1L2Q5TEA6 688 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 FOXB2Q5VYV0 432 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 PRUNE1Q86TP1 453 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 LONP2Q86WA8 852 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 SLC13A5Q86YT5 568 aaPredicted RBP11.65□□□□□ -0.54
ZNF558-201ENST00000301475 CLEC10AQ8IUN9 316 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 RUSC1Q9BVN2 902 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 MXD3Q9BW11 206 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 SLCO1B3Q9NPD5 702 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 ZMYM2Q9UBW7 1377 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 TGFB1I1O43294 461 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 ATMINO43313 823 aaPredicted RBP11.65□□□□□ -0.54
ZNF558-201ENST00000301475 EYA4O95677 639 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 TTC4O95801 387 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 ATP5DP30049 168 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 HADHBP55084 474 aaKnown RBP11.65□□□□□ -0.54
ZNF558-201ENST00000301475 DNAJC3Q13217 504 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 MOGSQ13724 837 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 MESDQ14696 234 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 OR52E8Q6IFG1 317 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 C16orf86Q6ZW13 317 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 LRRC47Q8N1G4 583 aaKnown RBP11.65□□□□□ -0.54
ZNF558-201ENST00000301475 CCDC24Q8N4L8 307 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 ZCWPW1Q9H0M4 648 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 NMRK1Q9NWW6 199 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 WDR35Q9P2L0 1181 aa11.65□□□□□ -0.54
ZNF558-201ENST00000301475 SMAPO00193 183 aa11.65□□□□□ -0.55
ZNF558-201ENST00000301475 ECEL1O95672 775 aa11.65□□□□□ -0.55
ZNF558-201ENST00000301475 CNGA1P29973 690 aa11.65□□□□□ -0.55
ZNF558-201ENST00000301475 ALDH3A1P30838 453 aa11.65□□□□□ -0.55
ZNF558-201ENST00000301475 FMO5P49326 533 aa11.65□□□□□ -0.55
ZNF558-201ENST00000301475 KRT17Q04695 432 aa11.65□□□□□ -0.55
ZNF558-201ENST00000301475 STRN3Q13033 797 aa11.65□□□□□ -0.55
ZNF558-201ENST00000301475 BMT2Q1RMZ1 405 aa11.65□□□□□ -0.55
ZNF558-201ENST00000301475 MTHFD1LQ6UB35 978 aa11.65□□□□□ -0.55
ZNF558-201ENST00000301475 ARHGEF18Q6ZSZ5 1173 aa11.65□□□□□ -0.55
ZNF558-201ENST00000301475 CATSPER3Q86XQ3 398 aa11.65□□□□□ -0.55
ZNF558-201ENST00000301475 RHOT2Q8IXI1 618 aa11.65□□□□□ -0.55
ZNF558-201ENST00000301475 CD101Q93033 1021 aa11.65□□□□□ -0.55
ZNF558-201ENST00000301475 DNAJC18Q9H819 358 aa11.65□□□□□ -0.55
ZNF558-201ENST00000301475 GPCPD1Q9NPB8 672 aa11.65□□□□□ -0.55
ZNF558-201ENST00000301475 MYO3BQ8WXR4 1341 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 SIGLEC16A6NMB1 481 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 GCNT3O95395 438 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 TRIM49P0CI25 452 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 TRIM49CP0CI26 452 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 DLATP10515 647 aaKnown RBP11.64□□□□□ -0.55
ZNF558-201ENST00000301475 ZNF746Q6NUN9 644 aaPredicted RBP11.64□□□□□ -0.55
ZNF558-201ENST00000301475 FAM186BQ8IYM0 893 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 ZFAND2BQ8WV99 257 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 INPP5DQ92835 1189 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 ZNF333Q96JL9 665 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 BTBD6Q96KE9 485 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 LRRC37BQ96QE4 947 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 NKIRAS1Q9NYS0 192 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 NINJ2Q9NZG7 142 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 TAF1LQ8IZX4 1826 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 GGPS1O95749 300 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 RPL13P26373 211 aaKnown RBP11.64□□□□□ -0.55
ZNF558-201ENST00000301475 SESN3P58005 492 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 SPIRE1Q08AE8 756 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 SETDB1Q15047 1291 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 TSNAXIP1Q2TAA8 658 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 RFWD3Q6PCD5 774 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 C1orf54Q8WWF1 131 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 GRAMD1AQ96CP6 724 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 INTS2Q9H0H0 1204 aaKnown RBP11.64□□□□□ -0.55
ZNF558-201ENST00000301475 LGALS13Q9UHV8 139 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 NAALADL1Q9UQQ1 740 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 BCS1LQ9Y276 419 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 USP20Q9Y2K6 914 aa11.64□□□□□ -0.55
ZNF558-201ENST00000301475 FOXN3O00409 490 aaPredicted RBP11.63□□□□□ -0.55
ZNF558-201ENST00000301475 BAG3O95817 575 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 FTLP02792 175 aaPredicted RBP11.63□□□□□ -0.55
ZNF558-201ENST00000301475 LDHBP07195 334 aaKnown RBP11.63□□□□□ -0.55
ZNF558-201ENST00000301475 IVDP26440 423 aa11.63□□□□□ -0.55
ZNF558-201ENST00000301475 EIF6P56537 245 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms