RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 FAM8A1Q9UBU6 413 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 PPME1Q9Y570 386 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 EMSYQ7Z589 1322 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 H3BRJ5 948 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 FDPSP14324 419 aaKnown RBP11.68□□□□□ -0.54
PBRM1-201ENST00000296302 BCAR1P56945 870 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 EDRF1Q3B7T1 1238 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 RHPN2Q8IUC4 686 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 NCLNQ969V3 563 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 TBC1D23Q9NUY8 699 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 A2ML1A8K2U0 1454 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 ADCY10Q96PN6 1610 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 USP17L15C9J2P7 530 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 USP17L13C9JLJ4 530 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 USP17L11C9JVI0 530 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 USP17L18D6R9N7 530 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 USP17L22D6RA61 530 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 USP17L17D6RBQ6 530 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 USP17L19D6RCP7 530 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 USP17L20D6RJB6 530 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 PIK3R2O00459 728 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 ARHGEF9O43307 516 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 ZNF189O75820 626 aaPredicted RBP11.68□□□□□ -0.54
PBRM1-201ENST00000296302 TDP2O95551 362 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 TRIM49P0CI25 452 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 TRIM49CP0CI26 452 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 KRT4P19013 534 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 USP17L24Q0WX57 530 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 USP17L6PQ6QN14 398 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 METTL23Q86XA0 190 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 RCOR2Q8IZ40 523 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 APOL6Q9BWW8 343 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 SMARCAL1Q9NZC9 954 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 BFARQ9NZS9 450 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 DLGAP2Q9P1A6 1054 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 CPSF3Q9UKF6 684 aaKnown RBP11.68□□□□□ -0.54
PBRM1-201ENST00000296302 ZFYVE16Q7Z3T8 1539 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 TMEM253P0C7T8 217 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 SCP2P22307 547 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 ALDH18A1P54886 795 aaKnown RBP11.67□□□□□ -0.54
PBRM1-201ENST00000296302 ARHGAP27Q6ZUM4 889 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 PBXIP1Q96AQ6 731 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 CCDC134Q9H6E4 229 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 APEX2Q9UBZ4 518 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 LRRIQ3A6PVS8 624 aaPredicted RBP11.67□□□□□ -0.54
PBRM1-201ENST00000296302 KLHL2O95198 593 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 SERPINB10P48595 397 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 ZNF394Q53GI3 561 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 HEATR6Q6AI08 1181 aaKnown RBP11.67□□□□□ -0.54
PBRM1-201ENST00000296302 SRBD1Q8N5C6 995 aaKnown RBP11.67□□□□□ -0.54
PBRM1-201ENST00000296302 PPP1R3GB7ZBB8 358 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 SLC16A4O15374 487 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 CLDN3O15551 220 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 KDM1AO60341 852 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 EYA4O95677 639 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 SDC4P31431 198 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 OSTNP61366 133 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 STK4Q13043 487 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 CYTH1Q15438 398 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 ZNF699Q32M78 642 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 PAPD7Q5XG87 772 aaKnown RBP11.67□□□□□ -0.54
PBRM1-201ENST00000296302 CYFIP1Q7L576 1253 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 TTC8Q8TAM2 541 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 CNKSR1Q969H4 720 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 FAM213AQ9BRX8 229 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 NBPF3Q9H094 633 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 CPVLQ9H3G5 476 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 DONSONQ9NYP3 566 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 ABCA8O94911 1581 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 PXDNLA1KZ92 1463 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 UTYO14607 1347 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 MAGEA13PA6NCF6 341 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 P4HBP07237 508 aaKnown RBP11.67□□□□□ -0.54
PBRM1-201ENST00000296302 KCTD2Q14681 263 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 ARL8AQ96BM9 186 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 SERPINB12Q96P63 405 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 DNAJC7Q99615 494 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 CCDC90BQ9GZT6 254 aa11.67□□□□□ -0.54
PBRM1-201ENST00000296302 ATP8B3O60423 1300 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 SMAPO00193 183 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 DEAF1O75398 565 aaPredicted RBP11.66□□□□□ -0.54
PBRM1-201ENST00000296302 CTDNEP1O95476 244 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 APOA1P02647 267 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 NQO1P15559 274 aaKnown RBP11.66□□□□□ -0.54
PBRM1-201ENST00000296302 EIF2AK2P19525 551 aaKnown RBP11.66□□□□□ -0.54
PBRM1-201ENST00000296302 PPARGP37231 505 aaPredicted RBP11.66□□□□□ -0.54
PBRM1-201ENST00000296302 PSMC1P62191 440 aaKnown RBP11.66□□□□□ -0.54
PBRM1-201ENST00000296302 KPNB1Q14974 876 aaKnown RBP11.66□□□□□ -0.54
PBRM1-201ENST00000296302 P3H1Q32P28 736 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 FLAD1Q8NFF5 587 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 PKD2L2Q9NZM6 624 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 DENND3A2RUS2 1198 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 E7ENQ6 273 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 H3BQF6 201 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 SERPINB3P29508 390 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 SCTRP47872 440 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 KRT76Q01546 638 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 STX3Q13277 289 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 KYNUQ16719 465 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 PODNQ7Z5L7 613 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms