RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 MXI1P50539 228 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 MFAP3P55082 362 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 VSNL1P62760 191 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 PPP3CAQ08209 521 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 RPS6KA1Q15418 735 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 TJAP1Q5JTD0 557 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 TREML2Q5T2D2 321 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 FAM160B1Q5W0V3 765 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 KRT39Q6A163 491 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 PHLDB3Q6NSJ2 640 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 USP50Q70EL3 339 aaPredicted RBP10.01□□□□□ -0.81
CLRN1-201ENST00000295911 CCDC60Q8IWA6 550 aaPredicted RBP10.01□□□□□ -0.81
CLRN1-201ENST00000295911 EXOC8Q8IYI6 725 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 COG1Q8WTW3 980 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 U2AF1L4Q8WU68 220 aaKnown RBP10.01□□□□□ -0.81
CLRN1-201ENST00000295911 POMGNT1Q8WZA1 660 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 MFSD14AQ96MC6 490 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 SH2D3AQ9BRG2 576 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 PACSIN1Q9BY11 444 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 GPR88Q9GZN0 384 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 TMEM8AQ9HCN3 771 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 ABCB6Q9NP58 842 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 UBE2TQ9NPD8 197 aaPredicted RBP10.01□□□□□ -0.81
CLRN1-201ENST00000295911 RNF181Q9P0P0 153 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 BTBD7Q9P203 1132 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 COQ4Q9Y3A0 265 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 SCN4AP35499 1836 aa10.01□□□□□ -0.81
CLRN1-201ENST00000295911 SYNGAP1Q96PV0 1343 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 IGKV6D-21A0A0A0MT36 114 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 LOC102724159A0A0B4J2E5 919 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 ANKRD63C9JTQ0 380 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 EDNRBP24530 442 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 ADSSP30520 456 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 GCLMP48507 274 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 POLGP54098 1239 aaPredicted RBP10□□□□□ -0.81
CLRN1-201ENST00000295911 DLG4P78352 724 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 CNTN2Q02246 1040 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 STRN3Q13033 797 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 PPIL2Q13356 520 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 PWP2Q15269 919 aaKnown RBP10□□□□□ -0.81
CLRN1-201ENST00000295911 ARHGAP44Q17R89 818 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 C1orf220Q5T0J3 134 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 SLFN12LQ6IEE8 588 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 SEPT14Q6ZU15 432 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 CYFIP1Q7L576 1253 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 ENOSF1Q7L5Y1 443 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 FASTKD5Q7L8L6 764 aaKnown RBP10□□□□□ -0.81
CLRN1-201ENST00000295911 TRMT1LQ7Z2T5 733 aaKnown RBP10□□□□□ -0.81
CLRN1-201ENST00000295911 SLFN11Q7Z7L1 901 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 NCAPG2Q86XI2 1143 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 GPD1LQ8N335 351 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 TPCN2Q8NHX9 752 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 PARD3BQ8TEW8 1205 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 CTNNBL1Q8WYA6 563 aaPredicted RBP10□□□□□ -0.81
CLRN1-201ENST00000295911 BICD1Q96G01 975 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 AGPAT1Q99943 283 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 SYT11Q9BT88 431 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 UBXN6Q9BZV1 441 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 TMEM117Q9H0C3 514 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 POLR3FQ9H1D9 316 aaPredicted RBP10□□□□□ -0.81
CLRN1-201ENST00000295911 VIPAS39Q9H9C1 493 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 GPBP1L1Q9HC44 474 aaPredicted RBP10□□□□□ -0.81
CLRN1-201ENST00000295911 ARHGAP28Q9P2N2 729 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 AGTPBP1Q9UPW5 1226 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 DIS3Q9Y2L1 958 aaKnown RBP10□□□□□ -0.81
CLRN1-201ENST00000295911 NCANO14594 1321 aa10□□□□□ -0.81
CLRN1-201ENST00000295911 ANKRD62A6NC57 917 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 SPDYE5A6NIY4 337 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 ZNF233A6NK53 670 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 TISP43B9A030 160 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 ADM5C9JUS6 153 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 FOXN3O00409 490 aaPredicted RBP9.99□□□□□ -0.81
CLRN1-201ENST00000295911 HNRNPDLO14979 420 aaKnown RBP9.99□□□□□ -0.81
CLRN1-201ENST00000295911 NCK2O43639 380 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 ZC3H11AO75152 810 aaKnown RBP eCLIP9.99□□□□□ -0.81
CLRN1-201ENST00000295911 SASH3O75995 380 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 KIF4AO95239 1232 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 FTCDO95954 541 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 CXCR5P32302 372 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 NAMPTP43490 491 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 GPC3P51654 580 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 GALCP54803 685 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 SP2Q02086 613 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 SP4Q02446 784 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 CYP24A1Q07973 514 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 C2orf54Q08AI8 447 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 SMC1AQ14683 1233 aaKnown RBP9.99□□□□□ -0.81
CLRN1-201ENST00000295911 EMC2Q15006 297 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 CLUL1Q15846 466 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 MTERF2Q49AM1 385 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 CCNI2Q6ZMN8 369 aaPredicted RBP9.99□□□□□ -0.81
CLRN1-201ENST00000295911 CBWD2Q8IUF1 395 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 LRRC57Q8N9N7 239 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 LNX1Q8TBB1 728 aaPredicted RBP9.99□□□□□ -0.81
CLRN1-201ENST00000295911 AFAP1L1Q8TED9 768 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 SLC7A3Q8WY07 619 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 BSNDQ8WZ55 320 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 RFFLQ8WZ73 363 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 FAM167AQ96KS9 214 aa9.99□□□□□ -0.81
CLRN1-201ENST00000295911 ASCC2Q9H1I8 757 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms