RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 GLB1LQ6UWU2 654 aa10.4□□□□□ -0.74
CNOT9-202ENST00000295701 CABP7Q86V35 215 aa10.4□□□□□ -0.74
CNOT9-202ENST00000295701 ZNF410Q86VK4 478 aa10.4□□□□□ -0.74
CNOT9-202ENST00000295701 UBALD2Q8IYN6 164 aa10.4□□□□□ -0.74
CNOT9-202ENST00000295701 RDM1Q8NG50 284 aa10.4□□□□□ -0.74
CNOT9-202ENST00000295701 KLHL5Q96PQ7 755 aa10.4□□□□□ -0.74
CNOT9-202ENST00000295701 MIOSQ9NXC5 875 aa10.4□□□□□ -0.74
CNOT9-202ENST00000295701 DDX25Q9UHL0 483 aaKnown RBP10.4□□□□□ -0.74
CNOT9-202ENST00000295701 PCDHB2Q9Y5E7 798 aa10.4□□□□□ -0.74
CNOT9-202ENST00000295701 IRAK3Q9Y616 596 aa10.4□□□□□ -0.74
CNOT9-202ENST00000295701 TDRD15B5MCY1 1934 aaKnown RBP10.4□□□□□ -0.74
CNOT9-202ENST00000295701 SPTBN4Q9H254 2564 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 F8W810 466 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 C2CD2LO14523 706 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 NRP1O14786 923 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 ZNF623O75123 536 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 POMCP01189 267 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 CNPP09543 421 aaKnown RBP10.39□□□□□ -0.75
CNOT9-202ENST00000295701 KLRC2P26717 231 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 HOXA11P31270 313 aaPredicted RBP10.39□□□□□ -0.75
CNOT9-202ENST00000295701 PSMC5P62195 406 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 CDC42EP1Q00587 391 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 BMS1Q14692 1282 aaKnown RBP10.39□□□□□ -0.75
CNOT9-202ENST00000295701 LETM2Q2VYF4 491 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 ZNF787Q6DD87 383 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 RUFY3Q7L099 469 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 MRPL10Q7Z7H8 261 aaKnown RBP10.39□□□□□ -0.75
CNOT9-202ENST00000295701 GPR149Q86SP6 731 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 ZDHHC14Q8IZN3 488 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 PRPF31Q8WWY3 499 aaKnown RBP10.39□□□□□ -0.75
CNOT9-202ENST00000295701 INO80BQ9C086 356 aaPredicted RBP10.39□□□□□ -0.75
CNOT9-202ENST00000295701 CYP26B1Q9NR63 512 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 AGPAT5Q9NUQ2 364 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 DZANK1Q9NVP4 752 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 RGL1Q9NZL6 768 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 VAV3Q9UKW4 847 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 COL4A3BPQ9Y5P4 624 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 ARID2Q68CP9 1835 aa10.39□□□□□ -0.75
CNOT9-202ENST00000295701 NARSO43776 548 aaKnown RBP10.38□□□□□ -0.75
CNOT9-202ENST00000295701 N4BP1O75113 896 aaKnown RBP10.38□□□□□ -0.75
CNOT9-202ENST00000295701 DEXIO95424 95 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 ALDH2P05091 517 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 SKIP12755 728 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 NPR3P17342 541 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 PSMA5P28066 241 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 QARSP47897 775 aaKnown RBP10.38□□□□□ -0.75
CNOT9-202ENST00000295701 CLCN4P51793 760 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 LAMTOR4Q0VGL1 99 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 NONOQ15233 471 aaKnown RBP eCLIP10.38□□□□□ -0.75
CNOT9-202ENST00000295701 AMHR2Q16671 573 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 EARS2Q5JPH6 523 aaKnown RBP10.38□□□□□ -0.75
CNOT9-202ENST00000295701 CWF19L1Q69YN2 538 aaKnown RBP10.38□□□□□ -0.75
CNOT9-202ENST00000295701 TRIM22Q8IYM9 498 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 DAGLBQ8NCG7 672 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 SMG8Q8ND04 991 aaKnown RBP10.38□□□□□ -0.75
CNOT9-202ENST00000295701 FLCNQ8NFG4 579 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 RSAD2Q8WXG1 361 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 HAS1Q92839 578 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 CPB2Q96IY4 423 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 CEP170P1Q96L14 293 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 SNX27Q96L92 541 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 EIF2AQ9BY44 585 aaKnown RBP10.38□□□□□ -0.75
CNOT9-202ENST00000295701 C22orf23Q9BZE7 217 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 SLKQ9H2G2 1235 aaPredicted RBP10.38□□□□□ -0.75
CNOT9-202ENST00000295701 DHX33Q9H6R0 707 aaKnown RBP10.38□□□□□ -0.75
CNOT9-202ENST00000295701 RSAD1Q9HA92 442 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 FAN1Q9Y2M0 1017 aa10.38□□□□□ -0.75
CNOT9-202ENST00000295701 PRG3Q9Y2Y8 225 aaPredicted RBP10.38□□□□□ -0.75
CNOT9-202ENST00000295701 DCHS1Q96JQ0 3298 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 A0A087WWV3 80 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 CPLX1O14810 134 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 SPATA31D3P0C874 917 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 RAB27AP51159 221 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 PPP2R5CQ13362 524 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 GIT2Q14161 759 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 CTTNQ14247 550 aaKnown RBP10.37□□□□□ -0.75
CNOT9-202ENST00000295701 MOXD1Q6UVY6 613 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 SPATA31D4Q6ZUB0 917 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 FRMD5Q7Z6J6 570 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 ST13P5Q8NFI4 369 aaPredicted RBP10.37□□□□□ -0.75
CNOT9-202ENST00000295701 URGCPQ8TCY9 931 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 PGBD4Q96DM1 585 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 ZNF274Q96GC6 653 aaPredicted RBP10.37□□□□□ -0.75
CNOT9-202ENST00000295701 DYDC2Q96IM9 177 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 IRF2BPLQ9H1B7 796 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 MFSD1Q9H3U5 465 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 KCNMB3Q9NPA1 279 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 MARCH5Q9NX47 278 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 USTQ9Y2C2 406 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 HES2Q9Y543 173 aa10.37□□□□□ -0.75
CNOT9-202ENST00000295701 TRIP11Q15643 1979 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 CACNA1IQ9P0X4 2223 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 CCDC195A0A1B0GUA6 201 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 PRR23AA6NEV1 266 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 PROB1E7EW31 1015 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 CCNT1O60563 726 aaKnown RBP10.36□□□□□ -0.75
CNOT9-202ENST00000295701 RFPL2O75678 378 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 P4HBP07237 508 aaKnown RBP10.36□□□□□ -0.75
CNOT9-202ENST00000295701 OR1G1P47890 313 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 AK2P54819 239 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms