RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 SPEF1Q9Y4P9 236 aa11.3□□□□□ -0.6
ERGIC3-201ENST00000279052 ROBO2Q9HCK4 1378 aa11.3□□□□□ -0.6
ERGIC3-201ENST00000279052 A0A0G2JS52 829 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 IQANK1A0A1B0GTG1 560 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 ARHGAP10A1A4S6 786 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 H7C1D1 291 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 MCF2LO15068 1137 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 MUSKO15146 869 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 XPOTO43592 962 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 BAIAP3O94812 1187 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 POLR2CP19387 275 aaPredicted RBP11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 NDUFA8P51970 172 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 PPP2R2BQ00005 443 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 AKAP4Q5JQC9 854 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 TMEM63BQ5T3F8 832 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 KLHDC10Q6PID8 442 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 UNC5DQ6UXZ4 953 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 TMTC3Q6ZXV5 915 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 EPS8L3Q8TE67 593 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 GGT7Q9UJ14 662 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 PNMA3Q9UL41 463 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 PCDHGA8Q9Y5G5 932 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 ZMYM6O95789 1325 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 MAP3K19Q56UN5 1328 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 AKAP12Q02952 1782 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 SBNO1A3KN83 1393 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 SOBPA7XYQ1 873 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 KLHL2O95198 593 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 PIM1P11309 404 aaPredicted RBP11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 ZNF844Q08AG5 666 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 SF3A3Q12874 501 aaKnown RBP eCLIP11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 SP140Q13342 867 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 NFE2L1Q14494 772 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 NR1I3Q14994 352 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 SF3B4Q15427 424 aaKnown RBP eCLIP11.29□□□□□ -0.65e-7■■■■□ 23
ERGIC3-201ENST00000279052 MOGQ16653 247 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 C10orf62Q5T681 223 aaPredicted RBP11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 TSHZ3Q63HK5 1081 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 RBM44Q6ZP01 1051 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 FAM47EQ6ZV65 393 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 MIER3Q7Z3K6 550 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 CPSF7Q8N684 471 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 RIN3Q8TB24 985 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 BCL7CQ8WUZ0 217 aaPredicted RBP11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 NRG4Q8WWG1 115 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 INPP5DQ92835 1189 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 CAAP1Q9H8G2 361 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 ZNF277Q9NRM2 450 aaPredicted RBP11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 TLR7Q9NYK1 1049 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 TUBE1Q9UJT0 475 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 UTP11Q9Y3A2 253 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 TUBGCP6Q96RT7 1819 aa11.29□□□□□ -0.6
ERGIC3-201ENST00000279052 CCDC160A6NGH7 325 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 GNPATO15228 680 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 ARHGEF15O94989 841 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 ESRRAP11474 423 aaPredicted RBP11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 CARSP49589 748 aaKnown RBP11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 RNASELQ05823 741 aaKnown RBP11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 DNAJC3Q13217 504 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 Q3C1V9 767 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 PPP4R4Q6NUP7 873 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 DTHD1Q6ZMT9 781 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 TMA16Q96EY4 203 aaKnown RBP11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 THEGQ9P2T0 379 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 ZNF212Q9UDV6 495 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 KCNN3Q9UGI6 736 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 UMODL1Q5DID0 1318 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 H0YGN5 161 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 CHD2O14647 1828 aaKnown RBP11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 ARHGEF10O15013 1369 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 ABCC6O95255 1503 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 USP6P35125 1406 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 IGHMBP2P38935 993 aaKnown RBP11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 CLK3P49761 638 aaKnown RBP11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 MLLT6P55198 1093 aaPredicted RBP11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 CHRNEQ04844 493 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 KLHL30Q0D2K2 578 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 PDE1CQ14123 709 aaPredicted RBP11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 NAALADL2Q58DX5 795 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 DSTYKQ6XUX3 929 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 PPP1R21Q6ZMI0 780 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 CYP2U1Q7Z449 544 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 ATP6V0D2Q8N8Y2 350 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 USP38Q8NB14 1042 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 MRPL1Q9BYD6 325 aaKnown RBP11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 MARCH7Q9H992 704 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 DMTF1Q9Y222 760 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 ARL2BPQ9Y2Y0 163 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 NFS1Q9Y697 457 aa11.28□□□□□ -0.6
ERGIC3-201ENST00000279052 LRRC72A6NJI9 287 aa11.27□□□□□ -0.6
ERGIC3-201ENST00000279052 PLSCR1O15162 318 aa11.27□□□□□ -0.6
ERGIC3-201ENST00000279052 ALOX15BO15296 676 aa11.27□□□□□ -0.6
ERGIC3-201ENST00000279052 ENTPD5O75356 428 aa11.27□□□□□ -0.6
ERGIC3-201ENST00000279052 TRMUO75648 421 aaKnown RBP11.27□□□□□ -0.6
ERGIC3-201ENST00000279052 GJB6O95452 261 aa11.27□□□□□ -0.6
ERGIC3-201ENST00000279052 CALM1P0DP23 149 aa11.27□□□□□ -0.6
ERGIC3-201ENST00000279052 CALM2P0DP24 149 aa11.27□□□□□ -0.6
ERGIC3-201ENST00000279052 CALM3P0DP25 149 aa11.27□□□□□ -0.6
ERGIC3-201ENST00000279052 IDEP14735 1019 aa11.27□□□□□ -0.6
ERGIC3-201ENST00000279052 CTNNA1P35221 906 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms