RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 SCP2P22307 547 aa15.33■□□□□ 0.05
TMEM47-201ENST00000275954 FIGNQ5HY92 759 aa15.33■□□□□ 0.05
TMEM47-201ENST00000275954 OR6B2Q6IFH4 312 aa15.33■□□□□ 0.05
TMEM47-201ENST00000275954 MMP19Q99542 508 aa15.33■□□□□ 0.05
TMEM47-201ENST00000275954 NGRNQ9NPE2 291 aaKnown RBP15.33■□□□□ 0.05
TMEM47-201ENST00000275954 TISP43B9A030 160 aa15.33■□□□□ 0.04
TMEM47-201ENST00000275954 C6orf222P0C671 652 aaPredicted RBP15.33■□□□□ 0.04
TMEM47-201ENST00000275954 PLS3P13797 630 aa15.33■□□□□ 0.04
TMEM47-201ENST00000275954 HSPA6P17066 643 aa15.33■□□□□ 0.04
TMEM47-201ENST00000275954 BBS9Q3SYG4 887 aa15.33■□□□□ 0.04
TMEM47-201ENST00000275954 BTBD6Q96KE9 485 aa15.33■□□□□ 0.04
TMEM47-201ENST00000275954 EHD4Q9H223 541 aa15.33■□□□□ 0.04
TMEM47-201ENST00000275954 SYNGAP1Q96PV0 1343 aa15.33■□□□□ 0.04
TMEM47-201ENST00000275954 MYL3P08590 195 aa15.33■□□□□ 0.04
TMEM47-201ENST00000275954 PAPD7Q5XG87 772 aaKnown RBP15.33■□□□□ 0.04
TMEM47-201ENST00000275954 RNF149Q8NC42 400 aa15.33■□□□□ 0.04
TMEM47-201ENST00000275954 GMCL1Q96IK5 515 aa15.33■□□□□ 0.04
TMEM47-201ENST00000275954 HEXIM2Q96MH2 286 aaKnown RBP15.33■□□□□ 0.04
TMEM47-201ENST00000275954 TSNARE1Q96NA8 513 aa15.33■□□□□ 0.04
TMEM47-201ENST00000275954 ZIM3Q96PE6 472 aa15.33■□□□□ 0.04
TMEM47-201ENST00000275954 RIT2Q99578 217 aa15.33■□□□□ 0.04
TMEM47-201ENST00000275954 SLC5A4Q9NY91 659 aa15.33■□□□□ 0.04
TMEM47-201ENST00000275954 MAGED2Q9UNF1 606 aaPredicted RBP15.33■□□□□ 0.04
TMEM47-201ENST00000275954 HMGB1P1B2RPK0 211 aaPredicted RBP15.33■□□□□ 0.04
TMEM47-201ENST00000275954 PDE2AO00408 941 aaPredicted RBP15.33■□□□□ 0.04
TMEM47-201ENST00000275954 SLC16A3O15427 465 aaKnown RBP15.33■□□□□ 0.04
TMEM47-201ENST00000275954 BACE1P56817 501 aa15.33■□□□□ 0.04
TMEM47-201ENST00000275954 ZNF507Q8TCN5 953 aa15.33■□□□□ 0.04
TMEM47-201ENST00000275954 PRRC2BQ5JSZ5 2229 aaKnown RBP15.32■□□□□ 0.04
TMEM47-201ENST00000275954 TRIM66O15016 1216 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 TLR3O15455 904 aaKnown RBP15.32■□□□□ 0.04
TMEM47-201ENST00000275954 FGFR4P22455 802 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 GNA15P30679 374 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 TFDP1Q14186 410 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 LRRC14Q15048 493 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 ZNF568Q3ZCX4 644 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 GPD1LQ8N335 351 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 LPAR1Q92633 364 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 P2RX7Q99572 595 aaKnown RBP15.32■□□□□ 0.04
TMEM47-201ENST00000275954 TARS2Q9BW92 718 aaKnown RBP15.32■□□□□ 0.04
TMEM47-201ENST00000275954 FGFBP2Q9BYJ0 223 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 AP5M1Q9H0R1 490 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 COMMD10Q9Y6G5 202 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 TKFCQ3LXA3 575 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 SPOUT1Q5T280 376 aaKnown RBP15.32■□□□□ 0.04
TMEM47-201ENST00000275954 SLFN12LQ6IEE8 588 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 PLCD3Q8N3E9 789 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 ELAC2Q9BQ52 826 aaKnown RBP15.32■□□□□ 0.04
TMEM47-201ENST00000275954 PIK3R2O00459 728 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 MEIS2O14770 477 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 PPP1R11O60927 126 aaPredicted RBP15.32■□□□□ 0.04
TMEM47-201ENST00000275954 SLITRK3O94933 977 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 COMTP21964 271 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 FAM133BQ5BKY9 247 aaKnown RBP15.32■□□□□ 0.04
TMEM47-201ENST00000275954 USP38Q8NB14 1042 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 TCP11Q8WWU5 503 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 PSPC1Q8WXF1 523 aaKnown RBP15.32■□□□□ 0.04
TMEM47-201ENST00000275954 SHISA4Q96DD7 197 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 TRIM11Q96F44 468 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 SEPT10Q9P0V9 454 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 KLHL14Q9P2G3 628 aa15.32■□□□□ 0.04
TMEM47-201ENST00000275954 TMEM119Q4V9L6 283 aa15.31■□□□□ 0.04
TMEM47-201ENST00000275954 ZNF720Q7Z2F6 126 aa15.31■□□□□ 0.04
TMEM47-201ENST00000275954 RAET1EQ8TD07 263 aa15.31■□□□□ 0.04
TMEM47-201ENST00000275954 RPF1Q9H9Y2 349 aaKnown RBP15.31■□□□□ 0.04
TMEM47-201ENST00000275954 AFDNP55196 1824 aaKnown RBP15.31■□□□□ 0.04
TMEM47-201ENST00000275954 GRID2IPA4D2P6 1211 aa15.31■□□□□ 0.04
TMEM47-201ENST00000275954 CSDE1O75534 798 aaKnown RBP15.31■□□□□ 0.04
TMEM47-201ENST00000275954 CTSHP09668 335 aa15.31■□□□□ 0.04
TMEM47-201ENST00000275954 PRKCEQ02156 737 aa15.31■□□□□ 0.04
TMEM47-201ENST00000275954 CNTN2Q02246 1040 aa15.31■□□□□ 0.04
TMEM47-201ENST00000275954 ITIH3Q06033 890 aa15.31■□□□□ 0.04
TMEM47-201ENST00000275954 MIIPQ5JXC2 388 aa15.31■□□□□ 0.04
TMEM47-201ENST00000275954 HSPH1Q92598 858 aa15.31■□□□□ 0.04
TMEM47-201ENST00000275954 ARHGEF2Q92974 986 aaKnown RBP15.31■□□□□ 0.04
TMEM47-201ENST00000275954 DNAJC19Q96DA6 116 aa15.31■□□□□ 0.04
TMEM47-201ENST00000275954 TXNP10599 105 aaKnown RBP15.31■□□□□ 0.04
TMEM47-201ENST00000275954 SEC24CP53992 1094 aa15.31■□□□□ 0.04
TMEM47-201ENST00000275954 ZNF667Q5HYK9 610 aa15.31■□□□□ 0.04
TMEM47-201ENST00000275954 NUGGCQ68CJ6 796 aa15.31■□□□□ 0.04
TMEM47-201ENST00000275954 TOPORSQ9NS56 1045 aaPredicted RBP15.31■□□□□ 0.04
TMEM47-201ENST00000275954 EXOC1LA0A1B0GW35 172 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 CAPN9O14815 690 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 GGPS1O95749 300 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 GLI1P08151 1106 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 PSMA2P25787 234 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 ARL1P40616 181 aaPredicted RBP15.3■□□□□ 0.04
TMEM47-201ENST00000275954 STAT5BP51692 787 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 PPP6R3Q5H9R7 873 aaPredicted RBP15.3■□□□□ 0.04
TMEM47-201ENST00000275954 LRRC71Q8N4P6 559 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 CCDC197Q8NCU1 140 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 TPCN2Q8NHX9 752 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 ARL8AQ96BM9 186 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 TLR10Q9BXR5 811 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.3■□□□□ 0.04
TMEM47-201ENST00000275954 GON4LQ3T8J9 2241 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 PODXLO00592 558 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 PMS2P54278 862 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 SLMAPQ14BN4 828 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 ZNF699Q32M78 642 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms