RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 NID2Q14112 1375 aa13.71□□□□□ -0.21
HERC6-202ENST00000273960 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.71□□□□□ -0.21
HERC6-202ENST00000273960 STK10O94804 968 aaKnown RBP13.71□□□□□ -0.21
HERC6-202ENST00000273960 GJB6O95452 261 aa13.71□□□□□ -0.21
HERC6-202ENST00000273960 NPTXRO95502 500 aa13.71□□□□□ -0.21
HERC6-202ENST00000273960 SKIP12755 728 aa13.71□□□□□ -0.21
HERC6-202ENST00000273960 TAC1P20366 129 aa13.71□□□□□ -0.21
HERC6-202ENST00000273960 CDR2Q01850 454 aa13.71□□□□□ -0.21
HERC6-202ENST00000273960 CYP4A11Q02928 519 aa13.71□□□□□ -0.21
HERC6-202ENST00000273960 TBC1D10BQ4KMP7 808 aaPredicted RBP13.71□□□□□ -0.21
HERC6-202ENST00000273960 ZFYVE27Q5T4F4 411 aa13.71□□□□□ -0.21
HERC6-202ENST00000273960 CLEC10AQ8IUN9 316 aa13.71□□□□□ -0.21
HERC6-202ENST00000273960 RBBP8NLQ8NC74 664 aaPredicted RBP13.71□□□□□ -0.21
HERC6-202ENST00000273960 GPCPD1Q9NPB8 672 aa13.71□□□□□ -0.21
HERC6-202ENST00000273960 ZFP69BQ9UJL9 534 aa13.71□□□□□ -0.21
HERC6-202ENST00000273960 PVALEFA0A1B0GWK0 134 aa13.71□□□□□ -0.22
HERC6-202ENST00000273960 CLDN3O15551 220 aa13.71□□□□□ -0.22
HERC6-202ENST00000273960 PYGMP11217 842 aa13.71□□□□□ -0.22
HERC6-202ENST00000273960 TCP10Q12799 353 aa13.71□□□□□ -0.22
HERC6-202ENST00000273960 DAB2IPQ5VWQ8 1189 aa13.71□□□□□ -0.22
HERC6-202ENST00000273960 KRT25Q7Z3Z0 450 aa13.71□□□□□ -0.22
HERC6-202ENST00000273960 RASGEF1CQ8N431 466 aa13.71□□□□□ -0.22
HERC6-202ENST00000273960 PDCD7Q8N8D1 485 aaKnown RBP13.71□□□□□ -0.22
HERC6-202ENST00000273960 NAALADL1Q9UQQ1 740 aa13.71□□□□□ -0.22
HERC6-202ENST00000273960 BAZ2AQ9UIF9 1905 aaKnown RBP13.71□□□□□ -0.22
HERC6-202ENST00000273960 POTEFA5A3E0 1075 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 MAPK13O15264 365 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 ZBED4O75132 1171 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 POTEIP0CG38 1075 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 ADCY8P40145 1251 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 IKQ13123 557 aaPredicted RBP13.7□□□□□ -0.22
HERC6-202ENST00000273960 RRP1BQ14684 758 aaKnown RBP13.7□□□□□ -0.22
HERC6-202ENST00000273960 DRAP1Q14919 205 aaPredicted RBP13.7□□□□□ -0.22
HERC6-202ENST00000273960 SEL1L2Q5TEA6 688 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 OR52E8Q6IFG1 317 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 POTEGQ6S5H5 508 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 POTEEQ6S8J3 1075 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 PPFIBP2Q8ND30 876 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 ZNF384Q8TF68 577 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 SLC20A1Q8WUM9 679 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 SYN2Q92777 582 aaPredicted RBP13.7□□□□□ -0.22
HERC6-202ENST00000273960 EDEM3Q9BZQ6 932 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 ETNK2Q9NVF9 386 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 STOML1Q9UBI4 398 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 STXBP5LQ9Y2K9 1186 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 AKAP11Q9UKA4 1901 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 A6NJR5 290 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 TXNDC9O14530 226 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 AKAP3O75969 853 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 USP1O94782 785 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 BTDP43251 543 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 THOC5Q13769 683 aaKnown RBP13.7□□□□□ -0.22
HERC6-202ENST00000273960 PRR5LQ6MZQ0 368 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 CEP128Q6ZU80 1094 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 CCDC65Q8IXS2 484 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 HIPK4Q8NE63 616 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 PHF12Q96QT6 1004 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 ZC3H12CQ9C0D7 883 aaKnown RBP13.7□□□□□ -0.22
HERC6-202ENST00000273960 XIRP1Q702N8 1843 aaKnown RBP13.7□□□□□ -0.22
HERC6-202ENST00000273960 RSPH10B2B2RC85 870 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 RSPH10BP0C881 870 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 CHRNB2P17787 502 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 VHLP40337 213 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 GNAQP50148 359 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 CYP2J2P51589 502 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 POLGP54098 1239 aaPredicted RBP13.7□□□□□ -0.22
HERC6-202ENST00000273960 CACNB3P54284 484 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 GPSM2P81274 684 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 PPP2R5CQ13362 524 aa13.7□□□□□ -0.22
HERC6-202ENST00000273960 EIF1ADQ8N9N8 165 aaKnown RBP13.7□□□□□ -0.22
HERC6-202ENST00000273960 PRR11Q96HE9 360 aaPredicted RBP13.7□□□□□ -0.22
HERC6-202ENST00000273960 GPR75-ASB3A0A0A6YYF3 556 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 PHF2O75151 1096 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 ATP6V1G1O75348 118 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 CLSTN1O94985 981 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 APBA3O96018 575 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 SLURP2P0DP57 97 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 COMTP21964 271 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 CA4P22748 312 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 WDR4P57081 412 aaKnown RBP13.69□□□□□ -0.22
HERC6-202ENST00000273960 IL9RQ01113 521 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 KRT17Q04695 432 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 ARHGEF18Q6ZSZ5 1173 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 MYLK4Q86YV6 388 aaPredicted RBP13.69□□□□□ -0.22
HERC6-202ENST00000273960 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.69□□□□□ -0.22
HERC6-202ENST00000273960 SLC7A6OSQ96CW6 309 aaPredicted RBP13.69□□□□□ -0.22
HERC6-202ENST00000273960 ZNF333Q96JL9 665 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 TMEM47Q9BQJ4 181 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 ASB3Q9Y575 518 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 SLC4A7Q9Y6M7 1214 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 TBX10O75333 385 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 GCNT3O95395 438 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 PLA2G4BP0C869 781 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 RARGP13631 454 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 PIK3CAP42336 1068 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 USP46P62068 366 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 MTFR1Q15390 333 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 SEPT7Q16181 437 aaKnown RBP13.69□□□□□ -0.22
HERC6-202ENST00000273960 C2CD6Q53TS8 623 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 AGGF1Q8N302 714 aaeCLIP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms