RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 ADCY6O43306 1168 aa16.68■□□□□ 0.26
COPS3-201ENST00000268717 C22orf31O95567 290 aa16.68■□□□□ 0.26
COPS3-201ENST00000268717 LDHAP00338 332 aaKnown RBP16.68■□□□□ 0.26
COPS3-201ENST00000268717 PGK1P00558 417 aa16.68■□□□□ 0.26
COPS3-201ENST00000268717 SERPING1P05155 500 aa16.68■□□□□ 0.26
COPS3-201ENST00000268717 MKRN4PQ13434 485 aaPredicted RBP16.68■□□□□ 0.26
COPS3-201ENST00000268717 TFDP1Q14186 410 aa16.68■□□□□ 0.26
COPS3-201ENST00000268717 CBWD6Q4V339 395 aa16.68■□□□□ 0.26
COPS3-201ENST00000268717 CBWD3Q5JTY5 395 aa16.68■□□□□ 0.26
COPS3-201ENST00000268717 CBWD5Q5RIA9 395 aa16.68■□□□□ 0.26
COPS3-201ENST00000268717 ZBTB8OSQ8IWT0 167 aa16.68■□□□□ 0.26
COPS3-201ENST00000268717 C16orf70Q9BSU1 422 aa16.68■□□□□ 0.26
COPS3-201ENST00000268717 SENP6Q9GZR1 1112 aaPredicted RBP16.68■□□□□ 0.26
COPS3-201ENST00000268717 CCDC113Q9H0I3 377 aa16.68■□□□□ 0.26
COPS3-201ENST00000268717 Q9Y3F1 56 aa16.68■□□□□ 0.26
COPS3-201ENST00000268717 NR2E3Q9Y5X4 410 aa16.68■□□□□ 0.26
COPS3-201ENST00000268717 BZW2Q9Y6E2 419 aaKnown RBP16.68■□□□□ 0.26
COPS3-201ENST00000268717 SIP14410 1827 aa16.68■□□□□ 0.26
COPS3-201ENST00000268717 H0YGN5 161 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 EXTL3O43909 919 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 ADAMTS4O75173 837 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 DUSP11O75319 330 aaKnown RBP16.67■□□□□ 0.26
COPS3-201ENST00000268717 MYCNP04198 464 aaPredicted RBP16.67■□□□□ 0.26
COPS3-201ENST00000268717 ADRB2P07550 413 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 MMP3P08254 477 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 TRIM49P0CI25 452 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 TRIM49CP0CI26 452 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 JAM2P57087 298 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 LAMTOR4Q0VGL1 99 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 DGKDQ16760 1214 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 C1orf220Q5T0J3 134 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 HGSNATQ68CP4 663 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 RNF180Q86T96 592 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 TXLNBQ8N3L3 684 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 LINC01465Q8N7H1 131 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 ACRBPQ8NEB7 543 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 OR6J1Q8NGC5 347 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 PARD3BQ8TEW8 1205 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 HAUS4Q9H6D7 363 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 NLRC4Q9NPP4 1024 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 A6NJR5 290 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 PRKCIP41743 596 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 TNFAIP2Q03169 654 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 CYP24A1Q07973 514 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 ASTE1Q2TB18 679 aaPredicted RBP16.67■□□□□ 0.26
COPS3-201ENST00000268717 ARHGAP29Q52LW3 1261 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 CBWD2Q8IUF1 395 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 RDH13Q8NBN7 331 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 EHBP1Q8NDI1 1231 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 SPAG5Q96R06 1193 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 INTS2Q9H0H0 1204 aaKnown RBP16.67■□□□□ 0.26
COPS3-201ENST00000268717 RNPEPQ9H4A4 650 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 SUCLA2Q9P2R7 463 aaPredicted RBP16.67■□□□□ 0.26
COPS3-201ENST00000268717 APEX2Q9UBZ4 518 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 GNEQ9Y223 722 aaKnown RBP16.67■□□□□ 0.26
COPS3-201ENST00000268717 COQ4Q9Y3A0 265 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 REXO2Q9Y3B8 237 aaKnown RBP16.67■□□□□ 0.26
COPS3-201ENST00000268717 FHOD1Q9Y613 1164 aa16.67■□□□□ 0.26
COPS3-201ENST00000268717 ZNF233A6NK53 670 aa16.66■□□□□ 0.26
COPS3-201ENST00000268717 H3BRB1 525 aa16.66■□□□□ 0.26
COPS3-201ENST00000268717 RBAK-RBAKDNI3L0D1 243 aa16.66■□□□□ 0.26
COPS3-201ENST00000268717 ACTN1P12814 892 aa16.66■□□□□ 0.26
COPS3-201ENST00000268717 INSRRP14616 1297 aa16.66■□□□□ 0.26
COPS3-201ENST00000268717 MXI1P50539 228 aa16.66■□□□□ 0.26
COPS3-201ENST00000268717 CLDN10P78369 228 aa16.66■□□□□ 0.26
COPS3-201ENST00000268717 DRP2Q13474 957 aa16.66■□□□□ 0.26
COPS3-201ENST00000268717 LRRC26Q2I0M4 334 aa16.66■□□□□ 0.26
COPS3-201ENST00000268717 EPC2Q52LR7 807 aa16.66■□□□□ 0.26
COPS3-201ENST00000268717 IFNLR1Q8IU57 520 aaPredicted RBP16.66■□□□□ 0.26
COPS3-201ENST00000268717 LMO3Q8TAP4 145 aa16.66■□□□□ 0.26
COPS3-201ENST00000268717 PLEKHO2Q8TD55 490 aa16.66■□□□□ 0.26
COPS3-201ENST00000268717 MRPL4Q9BYD3 311 aaKnown RBP16.66■□□□□ 0.26
COPS3-201ENST00000268717 STK33Q9BYT3 514 aa16.66■□□□□ 0.26
COPS3-201ENST00000268717 TUT1Q9H6E5 874 aaKnown RBP16.66■□□□□ 0.26
COPS3-201ENST00000268717 TMEM8AQ9HCN3 771 aa16.66■□□□□ 0.26
COPS3-201ENST00000268717 RANBP2P49792 3224 aaKnown RBP16.65■□□□□ 0.26
COPS3-201ENST00000268717 A0A0B4J269 797 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 KIF5CO60282 957 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 EIF4A3P38919 411 aaKnown RBP16.65■□□□□ 0.26
COPS3-201ENST00000268717 ARHGAP25P42331 645 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 KIF11P52732 1056 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 PPP3CAQ08209 521 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 RAPGEF1Q13905 1077 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 SPA17Q15506 151 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 ASIC2Q16515 512 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 MAPK6Q16659 721 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 KRT39Q6A163 491 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 EFCAB12Q6NXP0 572 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 SYT10Q6XYQ8 523 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 C7orf61Q8IZ16 206 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 KLHDC9Q8NEP7 349 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 MYRIPQ8NFW9 859 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 SAAL1Q96ER3 474 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 TSGA10Q9BZW7 698 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 UPF3AQ9H1J1 476 aaKnown RBP16.65■□□□□ 0.26
COPS3-201ENST00000268717 DEF6Q9H4E7 631 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 SUGCTQ9HAC7 445 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 AGO2Q9UKV8 859 aaKnown RBP16.65■□□□□ 0.26
COPS3-201ENST00000268717 PHF24Q9UPV7 400 aa16.65■□□□□ 0.26
COPS3-201ENST00000268717 TOM1L1O75674 476 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms