RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 GUF1Q8N442 669 aaKnown RBP18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 QARSP47897 775 aaKnown RBP18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 DUOXA2Q1HG44 320 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 CDKL3Q8IVW4 592 aaPredicted RBP18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 PPCSQ9HAB8 311 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 LRRIQ1Q96JM4 1722 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 AP3M2P53677 418 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 GYS2P54840 703 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 STAT4Q14765 748 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 RAD17O75943 681 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 ZNF394Q53GI3 561 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 PI16Q6UXB8 463 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 FAM213AQ9BRX8 229 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 SMG5Q9UPR3 1016 aaKnown RBP18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 RTN2O75298 545 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 ACBD5Q5T8D3 534 aaPredicted RBP18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 SLC26A7Q8TE54 656 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 GANCQ8TET4 914 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 TCP11X1B4DZS4 312 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 RAPGEF5Q92565 580 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 MADDQ8WXG6 1647 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 DAB1O75553 588 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 RAD23BP54727 409 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 CCNYL1Q8N7R7 359 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 PBXIP1Q96AQ6 731 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 EDEM3Q9BZQ6 932 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 GOLPH3LQ9H4A5 285 aa18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 ZBTB12Q9Y330 459 aaPredicted RBP18.47■□□□□ 0.55
NOTCH3-201ENST00000263388 DENND3A2RUS2 1198 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 USP17L5A8MUK1 530 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 NNMTP40261 264 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 MRPS25P82663 173 aaKnown RBP18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 TEX9Q8N6V9 391 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 WWP1Q9H0M0 922 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 MLXIPLQ9NP71 852 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 BFARQ9NZS9 450 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 ABCA6Q8N139 1617 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 ARSEP51690 589 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 BCAR1P56945 870 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 SIRT2Q8IXJ6 389 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 VIPAS39Q9H9C1 493 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 GH2P01242 217 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 KCNB1Q14721 858 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 ARID5BQ14865 1188 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 TJAP1Q5JTD0 557 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 MIGA2Q7L4E1 593 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 USP11P51784 963 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 TXNRD1Q16881 649 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 KHDRBS2Q5VWX1 349 aaKnown RBP18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 EFHBQ8N7U6 833 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 DDX28Q9NUL7 540 aaKnown RBP18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 TRAF3IP3Q9Y228 551 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 SASH1O94885 1247 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 KRT14P02533 472 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 TYK2P29597 1187 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 SPATA4Q8NEY3 305 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 AFG1LQ8WV93 481 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 HNRNPRO43390 633 aaKnown RBP18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 GNL1P36915 607 aaPredicted RBP18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 CAPRIN2Q6IMN6 1127 aaKnown RBP18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 ARMC2Q8NEN0 867 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 ATP11BQ9Y2G3 1177 aa18.46■□□□□ 0.55
NOTCH3-201ENST00000263388 ABCE1P61221 599 aaKnown RBP18.46■□□□□ 0.54
NOTCH3-201ENST00000263388 FASTKD1Q53R41 847 aaKnown RBP18.46■□□□□ 0.54
NOTCH3-201ENST00000263388 PPP1R16BQ96T49 567 aa18.46■□□□□ 0.54
NOTCH3-201ENST00000263388 FARP1Q9Y4F1 1045 aaPredicted RBP18.46■□□□□ 0.54
NOTCH3-201ENST00000263388 TRIM8Q9BZR9 551 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 ABCB11O95342 1321 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 DEAF1O75398 565 aaPredicted RBP18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 S100A5P33763 92 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 LRRC8EQ6NSJ5 796 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 GSPT2Q8IYD1 628 aaKnown RBP18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 PPP1R2P1Q96PQ5 205 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 PRMT1Q99873 361 aaKnown RBP18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 ZNF302Q9NR11 478 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 ADGRG1Q9Y653 693 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 POTEFA5A3E0 1075 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 POTEIP0CG38 1075 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 POTEGQ6S5H5 508 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 POTEEQ6S8J3 1075 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 CEP95Q96GE4 821 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 PIH1D3Q9NQM4 214 aaKnown RBP18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 INPP5AQ14642 412 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 CEP55Q53EZ4 464 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 PLEKHM3Q6ZWE6 761 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 KIF2CQ99661 725 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 SLC4A7Q9Y6M7 1214 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 ERBB3P21860 1342 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 KRT75O95678 551 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 STAT3P40763 770 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 KCNJ6P48051 423 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 NBPF20Q3BBV1 942 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 FAM102AQ5T9C2 384 aaPredicted RBP18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 ZNF555Q8NEP9 628 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 SCFD1Q8WVM8 642 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 PHF21AQ96BD5 680 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 RNPC3Q96LT9 517 aaKnown RBP18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 RBAKQ9NYW8 714 aaPredicted RBP18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 PKD2L2Q9NZM6 624 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 POTECB2RU33 542 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms