RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 ODF2Q5BJF6 829 aa24.31■■□□□ 1.48
MCF2L-201ENST00000261963 GKAP1Q5VSY0 366 aaPredicted RBP24.31■■□□□ 1.48
MCF2L-201ENST00000261963 MAP3K20Q9NYL2 800 aaKnown RBP24.31■■□□□ 1.48
MCF2L-201ENST00000261963 FER1L6Q2WGJ9 1857 aa24.31■■□□□ 1.48
MCF2L-201ENST00000261963 ANKRD62A6NC57 917 aa24.31■■□□□ 1.48
MCF2L-201ENST00000261963 SLC16A4O15374 487 aa24.31■■□□□ 1.48
MCF2L-201ENST00000261963 ATP2C2O75185 946 aa24.31■■□□□ 1.48
MCF2L-201ENST00000261963 GHRP10912 638 aa24.31■■□□□ 1.48
MCF2L-201ENST00000261963 MYCLP12524 364 aaPredicted RBP24.31■■□□□ 1.48
MCF2L-201ENST00000261963 VCAM1P19320 739 aa24.31■■□□□ 1.48
MCF2L-201ENST00000261963 PEX3P56589 373 aa24.31■■□□□ 1.48
MCF2L-201ENST00000261963 SLC8A3P57103 927 aa24.31■■□□□ 1.48
MCF2L-201ENST00000261963 BYSLQ13895 437 aaKnown RBP24.31■■□□□ 1.48
MCF2L-201ENST00000261963 HLTFQ14527 1009 aaKnown RBP eCLIP24.31■■□□□ 1.48
MCF2L-201ENST00000261963 KCTD19Q17RG1 926 aaPredicted RBP24.31■■□□□ 1.48
MCF2L-201ENST00000261963 CIAPIN1Q6FI81 312 aa24.31■■□□□ 1.48
MCF2L-201ENST00000261963 DDX42Q86XP3 938 aaKnown RBP eCLIP24.31■■□□□ 1.48
MCF2L-201ENST00000261963 HVCN1Q96D96 273 aa24.31■■□□□ 1.48
MCF2L-201ENST00000261963 RSRC1Q96IZ7 334 aaKnown RBP24.31■■□□□ 1.48
MCF2L-201ENST00000261963 PDCD2LQ9BRP1 358 aa24.31■■□□□ 1.48
MCF2L-201ENST00000261963 KDM4CQ9H3R0 1056 aa24.31■■□□□ 1.48
MCF2L-201ENST00000261963 SLC24A3Q9HC58 644 aa24.31■■□□□ 1.48
MCF2L-201ENST00000261963 TTC7AQ9ULT0 858 aaPredicted RBP24.31■■□□□ 1.48
MCF2L-201ENST00000261963 RPSAP08865 295 aaKnown RBP24.3■■□□□ 1.48
MCF2L-201ENST00000261963 NCKAP1LP55160 1127 aa24.3■■□□□ 1.48
MCF2L-201ENST00000261963 PPP2R2AP63151 447 aa24.3■■□□□ 1.48
MCF2L-201ENST00000261963 PPARDQ03181 441 aa24.3■■□□□ 1.48
MCF2L-201ENST00000261963 CUL1Q13616 776 aa24.3■■□□□ 1.48
MCF2L-201ENST00000261963 TRMT1LQ7Z2T5 733 aaKnown RBP24.3■■□□□ 1.48
MCF2L-201ENST00000261963 H0YGN5 161 aa24.3■■□□□ 1.48
MCF2L-201ENST00000261963 ADRB2P07550 413 aa24.3■■□□□ 1.48
MCF2L-201ENST00000261963 IRX1P78414 480 aaPredicted RBP24.3■■□□□ 1.48
MCF2L-201ENST00000261963 TBC1D10BQ4KMP7 808 aaPredicted RBP24.3■■□□□ 1.48
MCF2L-201ENST00000261963 PLA2G4FQ68DD2 849 aa24.3■■□□□ 1.48
MCF2L-201ENST00000261963 RAPGEF5Q92565 580 aa24.3■■□□□ 1.48
MCF2L-201ENST00000261963 KAT5Q92993 513 aa24.3■■□□□ 1.48
MCF2L-201ENST00000261963 LRRC45Q96CN5 670 aa24.3■■□□□ 1.48
MCF2L-201ENST00000261963 RMDN3Q96TC7 470 aa24.3■■□□□ 1.48
MCF2L-201ENST00000261963 NEUROG2Q9H2A3 272 aa24.3■■□□□ 1.48
MCF2L-201ENST00000261963 PXMP2Q9NR77 195 aa24.3■■□□□ 1.48
MCF2L-201ENST00000261963 BCCIPQ9P287 314 aaKnown RBP eCLIP24.3■■□□□ 1.48
MCF2L-201ENST00000261963 AMACRQ9UHK6 382 aa24.3■■□□□ 1.48
MCF2L-201ENST00000261963 NFS1Q9Y697 457 aa24.3■■□□□ 1.48
MCF2L-201ENST00000261963 MAPK13O15264 365 aa24.29■■□□□ 1.48
MCF2L-201ENST00000261963 PSMC5P62195 406 aa24.29■■□□□ 1.48
MCF2L-201ENST00000261963 MTMR2Q13614 643 aa24.29■■□□□ 1.48
MCF2L-201ENST00000261963 OR2W6PQ8NHA6 318 aa24.29■■□□□ 1.48
MCF2L-201ENST00000261963 CCT6BQ92526 530 aa24.29■■□□□ 1.48
MCF2L-201ENST00000261963 TATDN2Q93075 761 aa24.29■■□□□ 1.48
MCF2L-201ENST00000261963 TMEM117Q9H0C3 514 aa24.29■■□□□ 1.48
MCF2L-201ENST00000261963 SLITRK6Q9H5Y7 841 aa24.29■■□□□ 1.48
MCF2L-201ENST00000261963 NR2E1Q9Y466 385 aa24.29■■□□□ 1.48
MCF2L-201ENST00000261963 ATP6V1G2O95670 118 aa24.29■■□□□ 1.48
MCF2L-201ENST00000261963 PAEPP09466 180 aa24.29■■□□□ 1.48
MCF2L-201ENST00000261963 CTNNA1P35221 906 aaKnown RBP24.29■■□□□ 1.48
MCF2L-201ENST00000261963 ZNF844Q08AG5 666 aa24.29■■□□□ 1.48
MCF2L-201ENST00000261963 CETN1Q12798 172 aa24.29■■□□□ 1.48
MCF2L-201ENST00000261963 CPLX4Q7Z7G2 160 aa24.29■■□□□ 1.48
MCF2L-201ENST00000261963 TIPINQ9BVW5 301 aa24.29■■□□□ 1.48
MCF2L-201ENST00000261963 FGGP02679 453 aa24.28■■□□□ 1.48
MCF2L-201ENST00000261963 ADSSP30520 456 aa24.28■■□□□ 1.48
MCF2L-201ENST00000261963 ELF3P78545 371 aaPredicted RBP24.28■■□□□ 1.48
MCF2L-201ENST00000261963 POU5F1Q01860 360 aaKnown RBP24.28■■□□□ 1.48
MCF2L-201ENST00000261963 SAMD3Q8N6K7 520 aa24.28■■□□□ 1.48
MCF2L-201ENST00000261963 WNK4Q96J92 1243 aa24.28■■□□□ 1.48
MCF2L-201ENST00000261963 NOD2Q9HC29 1040 aa24.28■■□□□ 1.48
MCF2L-201ENST00000261963 GOLGA8IPA6NC78 632 aa24.27■■□□□ 1.48
MCF2L-201ENST00000261963 GOLGA8JA6NMD2 632 aa24.27■■□□□ 1.48
MCF2L-201ENST00000261963 WDR64B1ANS9 1081 aa24.27■■□□□ 1.48
MCF2L-201ENST00000261963 CTNND1O60716 968 aaKnown RBP24.27■■□□□ 1.48
MCF2L-201ENST00000261963 JAK3P52333 1124 aa24.27■■□□□ 1.48
MCF2L-201ENST00000261963 MCCD1P59942 119 aaPredicted RBP24.27■■□□□ 1.48
MCF2L-201ENST00000261963 AGBL2Q5U5Z8 902 aa24.27■■□□□ 1.48
MCF2L-201ENST00000261963 NAIF1Q69YI7 327 aaPredicted RBP24.27■■□□□ 1.48
MCF2L-201ENST00000261963 RPAP3Q9H6T3 665 aaPredicted RBP24.27■■□□□ 1.48
MCF2L-201ENST00000261963 ANKRD63C9JTQ0 380 aa24.27■■□□□ 1.48
MCF2L-201ENST00000261963 PMM2O15305 246 aa24.27■■□□□ 1.48
MCF2L-201ENST00000261963 MXI1P50539 228 aa24.27■■□□□ 1.48
MCF2L-201ENST00000261963 SNRPFP62306 86 aaKnown RBP24.27■■□□□ 1.48
MCF2L-201ENST00000261963 ZKSCAN8Q15776 578 aaPredicted RBP24.27■■□□□ 1.48
MCF2L-201ENST00000261963 XKR9Q5GH70 373 aa24.27■■□□□ 1.48
MCF2L-201ENST00000261963 FAM102BQ5T8I3 360 aa24.27■■□□□ 1.48
MCF2L-201ENST00000261963 RNF207Q6ZRF8 634 aa24.27■■□□□ 1.48
MCF2L-201ENST00000261963 CBWD2Q8IUF1 395 aa24.27■■□□□ 1.48
MCF2L-201ENST00000261963 MAB21L3Q8N8X9 362 aa24.27■■□□□ 1.48
MCF2L-201ENST00000261963 USP20Q9Y2K6 914 aa24.27■■□□□ 1.48
MCF2L-201ENST00000261963 TTI1O43156 1089 aa24.26■■□□□ 1.47
MCF2L-201ENST00000261963 ZNF280AP59817 542 aaPredicted RBP24.26■■□□□ 1.47
MCF2L-201ENST00000261963 UAP1Q16222 522 aaPredicted RBP24.26■■□□□ 1.47
MCF2L-201ENST00000261963 NSMFQ6X4W1 530 aa24.26■■□□□ 1.47
MCF2L-201ENST00000261963 KIRREL3Q8IZU9 778 aa24.26■■□□□ 1.47
MCF2L-201ENST00000261963 TMEM161BQ8NDZ6 487 aa24.26■■□□□ 1.47
MCF2L-201ENST00000261963 KIFC3Q9BVG8 833 aa24.26■■□□□ 1.47
MCF2L-201ENST00000261963 CELF4Q9BZC1 486 aaKnown RBP24.26■■□□□ 1.47
MCF2L-201ENST00000261963 CARD9Q9H257 536 aa24.26■■□□□ 1.47
MCF2L-201ENST00000261963 HADHBP55084 474 aaKnown RBP24.26■■□□□ 1.47
MCF2L-201ENST00000261963 ANO5Q75V66 913 aa24.26■■□□□ 1.47
MCF2L-201ENST00000261963 RPUSD2Q8IZ73 545 aaKnown RBP24.26■■□□□ 1.47
MCF2L-201ENST00000261963 SEC14L1Q92503 715 aa24.26■■□□□ 1.47
MCF2L-201ENST00000261963 ALG3Q92685 438 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms