RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 EXOC8Q8IYI6 725 aa9.4□□□□□ -0.91
CALCOCO2-201ENST00000258947 SYN2Q92777 582 aaPredicted RBP9.4□□□□□ -0.91
CALCOCO2-201ENST00000258947 APOL6Q9BWW8 343 aa9.4□□□□□ -0.91
CALCOCO2-201ENST00000258947 TRIM6Q9C030 488 aaPredicted RBP9.4□□□□□ -0.91
CALCOCO2-201ENST00000258947 TUT1Q9H6E5 874 aaKnown RBP9.4□□□□□ -0.91
CALCOCO2-201ENST00000258947 DHX33Q9H6R0 707 aaKnown RBP9.4□□□□□ -0.91
CALCOCO2-201ENST00000258947 DMAC2Q9NW81 257 aa9.4□□□□□ -0.91
CALCOCO2-201ENST00000258947 NXF1Q9UBU9 619 aaKnown RBP9.4□□□□□ -0.91
CALCOCO2-201ENST00000258947 AJAP1Q9UKB5 411 aaPredicted RBP9.4□□□□□ -0.91
CALCOCO2-201ENST00000258947 GTPBP10A4D1E9 387 aaKnown RBP9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 EXTL3O43909 919 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 LGALS2P05162 132 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 MYL3P08590 195 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 MAPK4P31152 587 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 EFNA5P52803 228 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 CBX1P83916 185 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 TNFAIP2Q03169 654 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 CYP24A1Q07973 514 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 RPS6KA1Q15418 735 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 EPC2Q52LR7 807 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 HGSNATQ68CP4 663 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 RPUSD2Q8IZ73 545 aaKnown RBP9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 SHCBP1Q8NEM2 672 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 LMBR1Q8WVP7 490 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 DHX38Q92620 1227 aaKnown RBP9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 PCYT2Q99447 389 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 TINF2Q9BSI4 451 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 AP5M1Q9H0R1 490 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 RNPEPQ9H4A4 650 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 KIAA1586Q9HCI6 787 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 TMEM8AQ9HCN3 771 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 AIPL1Q9NZN9 384 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 NAGPAQ9UK23 515 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 PCDHB4Q9Y5E5 795 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 MYH11P35749 1972 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 FANCGO15287 622 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 CTIFO43310 598 aaKnown RBP9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 ADCY3O60266 1144 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 CEP104O60308 925 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 ERLIN1O75477 346 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 CD19P15391 556 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 MYBPC2Q14324 1141 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 SPOPLQ6IQ16 392 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 FBXO38Q6PIJ6 1188 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 ANKRD23Q86SG2 305 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 SMARCAL1Q9NZC9 954 aa9.39□□□□□ -0.91
CALCOCO2-201ENST00000258947 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 ZMYND10O75800 440 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 GARTP22102 1010 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 EDNRBP24530 442 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 HNRNPH3P31942 346 aaKnown RBP9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 GJC1P36383 396 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 PHKA2P46019 1235 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 SNRPFP62306 86 aaKnown RBP9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 ACVR2BQ13705 512 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 ODF2Q5BJF6 829 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 CHADLQ6NUI6 762 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 LENG1Q96BZ8 264 aaPredicted RBP9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 GPBP1L1Q9HC44 474 aaPredicted RBP9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 VTA1Q9NP79 307 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 A0A087WZ62 844 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 MAFO75444 373 aaPredicted RBP9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 TADA3O75528 432 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 FECHP22830 423 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 C2orf54Q08AI8 447 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 BMS1Q14692 1282 aaKnown RBP9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 FAM110CQ1W6H9 321 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 ZBTB41Q5SVQ8 909 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 TMEM270Q6UE05 265 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 PASD1Q8IV76 773 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 SLC20A1Q8WUM9 679 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 TATDN2Q93075 761 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 MS4A4AQ96JQ5 239 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 GDAP1L1Q96MZ0 367 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 FDXACB1Q9BRP7 624 aaPredicted RBP9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 ADPGKQ9BRR6 497 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 C2orf40Q9H1Z8 148 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 ABHD16BQ9H3Z7 469 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 ARFGAP3Q9NP61 516 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 ARHGAP28Q9P2N2 729 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 HLA-DRAP01903 254 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 TNNC2P02585 160 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 ZBTB48P10074 688 aaPredicted RBP9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 GALCP54803 685 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 TUBB2AQ13885 445 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 LLGL1Q15334 1064 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 ATF7IP2Q5U623 682 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 ADAT2Q7Z6V5 191 aaKnown RBP9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 ZC3H3Q8IXZ2 948 aaKnown RBP9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 ZNF710Q8N1W2 664 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 TUBB2BQ9BVA1 445 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 SETD4Q9NVD3 440 aa9.38□□□□□ -0.91
CALCOCO2-201ENST00000258947 SPOPO43791 374 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 CALCAP01258 141 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 TCP1P17987 556 aaKnown RBP9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 MAPK8IP2Q13387 824 aaPredicted RBP9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 NAB2Q15742 525 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 DGKDQ16760 1214 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 IRF2BP2Q7Z5L9 587 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 PLEKHO2Q8TD55 490 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms