RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 SLC16A4O15374 487 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 CYP26A1O43174 497 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 PLA2G6O60733 806 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 EGFRP00533 1210 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 ICAM1P05362 532 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 PLS3P13797 630 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 CTNNA2P26232 953 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 CDC25CP30307 473 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 TCEAL1Q15170 157 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 C11orf63Q6NUN7 778 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 DDX1Q92499 740 aaKnown RBP10.89□□□□□ -0.67
COPB1-201ENST00000249923 SAAL1Q96ER3 474 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 FMO2Q99518 471 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 TMX4Q9H1E5 349 aaPredicted RBP10.89□□□□□ -0.67
COPB1-201ENST00000249923 DDX20Q9UHI6 824 aaKnown RBP10.89□□□□□ -0.67
COPB1-201ENST00000249923 UBIAD1Q9Y5Z9 338 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 MEFVO15553 781 aaPredicted RBP10.89□□□□□ -0.67
COPB1-201ENST00000249923 BCRP11274 1271 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 WNT7BP56706 349 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 LLGL2Q6P1M3 1020 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 MICALCLQ6ZW33 695 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 MIER3Q7Z3K6 550 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 HAUS6Q7Z4H7 955 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 C12orf56Q8IXR9 622 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 HELQQ8TDG4 1101 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 RAPGEF5Q92565 580 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 LRRC45Q96CN5 670 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 HOMER2Q9NSB8 354 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 UTP11Q9Y3A2 253 aaKnown RBP10.89□□□□□ -0.67
COPB1-201ENST00000249923 TMEM110-MUSTN1A8MSY1 372 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 PAEPP09466 180 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 ALAS1P13196 640 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 YWHABP31946 246 aaKnown RBP10.89□□□□□ -0.67
COPB1-201ENST00000249923 MAP2K1Q02750 393 aaPredicted RBP10.89□□□□□ -0.67
COPB1-201ENST00000249923 PPP1R7Q15435 360 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 NBPF9Q3BBW0 867 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 ZNF568Q3ZCX4 644 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 SCARA3Q6AZY7 606 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 INTS8Q75QN2 995 aaKnown RBP10.89□□□□□ -0.67
COPB1-201ENST00000249923 VEZTQ9HBM0 779 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 PNMA2Q9UL42 364 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 CCPG1Q9ULG6 757 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 TRPC6Q9Y210 931 aa10.89□□□□□ -0.67
COPB1-201ENST00000249923 P4HBP07237 508 aaKnown RBP10.88□□□□□ -0.67
COPB1-201ENST00000249923 CCDC172P0C7W6 258 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 PLTPP55058 493 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 NCKAP1LP55160 1127 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 DAB2IPQ5VWQ8 1189 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 ANO5Q75V66 913 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 CCDC26Q8TAB7 109 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 SYTL5Q8TDW5 730 aaPredicted RBP10.88□□□□□ -0.67
COPB1-201ENST00000249923 CHURC1Q8WUH1 139 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 TAAR1Q96RJ0 339 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 OSBPL7Q9BZF2 842 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 SEMA4AQ9H3S1 761 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 ZNF277Q9NRM2 450 aaPredicted RBP10.88□□□□□ -0.67
COPB1-201ENST00000249923 CTTNBP2NLQ9P2B4 639 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 DBR1Q9UK59 544 aaKnown RBP10.88□□□□□ -0.67
COPB1-201ENST00000249923 RLFQ13129 1914 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 KIAA1217Q5T5P2 1943 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 VIMP08670 466 aaKnown RBP10.88□□□□□ -0.67
COPB1-201ENST00000249923 MYBL1P10243 752 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 KCNJ1P48048 391 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 PEX3P56589 373 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 PPP2R2AP63151 447 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 IFI35P80217 286 aaPredicted RBP10.88□□□□□ -0.67
COPB1-201ENST00000249923 GHRHRQ02643 423 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 MYBPC2Q14324 1141 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 KRT71Q3SY84 523 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 B4GALNT4Q76KP1 1039 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 FAM114A2Q9NRY5 505 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 STK38LQ9Y2H1 464 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 USP20Q9Y2K6 914 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 COL11A1P12107 1806 aaPredicted RBP10.88□□□□□ -0.67
COPB1-201ENST00000249923 O00370 1275 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 EIF2AK2P19525 551 aaKnown RBP10.88□□□□□ -0.67
COPB1-201ENST00000249923 SCP2P22307 547 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 SLCO1A2P46721 670 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 BIRC3Q13489 604 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 MESDQ14696 234 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 AGBL2Q5U5Z8 902 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 NSMFQ6X4W1 530 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 XXYLT1Q8NBI6 393 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 TMEM161BQ8NDZ6 487 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 TAS1R2Q8TE23 839 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 SHC3Q92529 594 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 ZNF341Q9BYN7 854 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 RAVER2Q9HCJ3 691 aaKnown RBP10.88□□□□□ -0.67
COPB1-201ENST00000249923 AAASQ9NRG9 546 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 FEM1BQ9UK73 627 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 CD2APQ9Y5K6 639 aa10.88□□□□□ -0.67
COPB1-201ENST00000249923 PHF2O75151 1096 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 MTA2O94776 668 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 NUDT17P0C025 328 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 MAP3K10Q02779 954 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 SLC29A2Q14542 456 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 PSPC1Q8WXF1 523 aaKnown RBP10.87□□□□□ -0.67
COPB1-201ENST00000249923 PCYOX1Q9UHG3 505 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 DAAM1Q9Y4D1 1078 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 FOXO6A8MYZ6 492 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms