RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 CFAP45Q9UL16 551 aa14.04□□□□□ -0.16
VPREB3-201ENST00000248948 SLC16A4O15374 487 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 RECQL4O94761 1208 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 BRD1O95696 1058 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 POMCP01189 267 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 KRT18P05783 430 aaKnown RBP14.03□□□□□ -0.16
VPREB3-201ENST00000248948 GALTP07902 379 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 LIG1P18858 919 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 PROZP22891 400 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 DDIT3P35638 169 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 STAT6P42226 847 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 SLC11A1P49279 550 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 SCNN1GP51170 649 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 CACNB1Q02641 598 aaPredicted RBP14.03□□□□□ -0.16
VPREB3-201ENST00000248948 HYAL1Q12794 435 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 NT5DC1Q5TFE4 455 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 FOXD4L5Q5VV16 416 aaPredicted RBP14.03□□□□□ -0.16
VPREB3-201ENST00000248948 EEF1DP3Q658K8 133 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 SPRYD3Q8NCJ5 442 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 FOXD4L4Q8WXT5 416 aaPredicted RBP14.03□□□□□ -0.16
VPREB3-201ENST00000248948 IGSF21Q96ID5 467 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 ZFP42Q96MM3 310 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 FAM193BQ96PV7 902 aaPredicted RBP14.03□□□□□ -0.16
VPREB3-201ENST00000248948 CDCA3Q99618 268 aaPredicted RBP14.03□□□□□ -0.16
VPREB3-201ENST00000248948 ACO2Q99798 780 aaKnown RBP14.03□□□□□ -0.16
VPREB3-201ENST00000248948 TCF25Q9BQ70 676 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 APOL6Q9BWW8 343 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 RNF39Q9H2S5 420 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 CUEDC2Q9H467 287 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 POLD4Q9HCU8 107 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 NGRNQ9NPE2 291 aaKnown RBP14.03□□□□□ -0.16
VPREB3-201ENST00000248948 DNAJB4Q9UDY4 337 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 TTC28Q96AY4 2481 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 A0A0C4DFX4 3053 aa14.03□□□□□ -0.16
VPREB3-201ENST00000248948 NCOR1O75376 2440 aa14.02□□□□□ -0.16
VPREB3-201ENST00000248948 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.02□□□□□ -0.17
VPREB3-201ENST00000248948 NPHP3-ACAD11A0A0J9YXS1 232 aa14.02□□□□□ -0.17
VPREB3-201ENST00000248948 K7ENM7 598 aa14.02□□□□□ -0.17
VPREB3-201ENST00000248948 B4GALT3O60512 393 aa14.02□□□□□ -0.17
VPREB3-201ENST00000248948 DDHD2O94830 711 aa14.02□□□□□ -0.17
VPREB3-201ENST00000248948 MCF2P10911 925 aa14.02□□□□□ -0.17
VPREB3-201ENST00000248948 AKAP5P24588 427 aa14.02□□□□□ -0.17
VPREB3-201ENST00000248948 AFF1P51825 1210 aaKnown RBP14.02□□□□□ -0.17
VPREB3-201ENST00000248948 GIT2Q14161 759 aa14.02□□□□□ -0.17
VPREB3-201ENST00000248948 SMC1AQ14683 1233 aaKnown RBP14.02□□□□□ -0.17
VPREB3-201ENST00000248948 CTC1Q2NKJ3 1217 aa14.02□□□□□ -0.17
VPREB3-201ENST00000248948 MPZL3Q6UWV2 235 aa14.02□□□□□ -0.17
VPREB3-201ENST00000248948 TMEM173Q86WV6 379 aaPredicted RBP14.02□□□□□ -0.17
VPREB3-201ENST00000248948 ZNF280BQ86YH2 543 aa14.02□□□□□ -0.17
VPREB3-201ENST00000248948 COLGALT2Q8IYK4 626 aa14.02□□□□□ -0.17
VPREB3-201ENST00000248948 GSTCDQ8NEC7 633 aa14.02□□□□□ -0.17
VPREB3-201ENST00000248948 GBP3Q9H0R5 595 aa14.02□□□□□ -0.17
VPREB3-201ENST00000248948 CDT1Q9H211 546 aa14.02□□□□□ -0.17
VPREB3-201ENST00000248948 PTPRHQ9HD43 1115 aa14.02□□□□□ -0.17
VPREB3-201ENST00000248948 ENTPD7Q9NQZ7 604 aa14.02□□□□□ -0.17
VPREB3-201ENST00000248948 SEL1LQ9UBV2 794 aa14.02□□□□□ -0.17
VPREB3-201ENST00000248948 TCF20Q9UGU0 1960 aaKnown RBP14.02□□□□□ -0.17
VPREB3-201ENST00000248948 SFI1A8K8P3 1242 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 ABLIM1O14639 778 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 TRAK2O60296 914 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 NR1I2O75469 434 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 TOM1L1O75674 476 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 CSPG5O95196 566 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 PIGRP01833 764 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 GRM5P41594 1212 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 ERVFC1P60507 584 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 TFF2Q03403 129 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 DHX8Q14562 1220 aaKnown RBP14.01□□□□□ -0.17
VPREB3-201ENST00000248948 BMS1Q14692 1282 aaKnown RBP14.01□□□□□ -0.17
VPREB3-201ENST00000248948 NOLC1Q14978 699 aaKnown RBP eCLIP14.01□□□□□ -0.17
VPREB3-201ENST00000248948 DUSP6Q16828 381 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 LEXMQ3ZCV2 418 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 SV2BQ7L1I2 683 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 HAUS6Q7Z4H7 955 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 ADGRD2Q7Z7M1 963 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 DDX53Q86TM3 631 aaKnown RBP14.01□□□□□ -0.17
VPREB3-201ENST00000248948 FAM178BQ8IXR5 827 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 EFHBQ8N7U6 833 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 BCL7CQ8WUZ0 217 aaPredicted RBP14.01□□□□□ -0.17
VPREB3-201ENST00000248948 HVCN1Q96D96 273 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 CCDC94Q9BW85 323 aaPredicted RBP14.01□□□□□ -0.17
VPREB3-201ENST00000248948 TARS2Q9BW92 718 aaKnown RBP14.01□□□□□ -0.17
VPREB3-201ENST00000248948 ZBP1Q9H171 429 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 TNMDQ9H2S6 317 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 ST6GALNAC4Q9H4F1 302 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 MAGEF1Q9HAY2 307 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 TOPORSQ9NS56 1045 aaPredicted RBP14.01□□□□□ -0.17
VPREB3-201ENST00000248948 SNTG2Q9NY99 539 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 TFIP11Q9UBB9 837 aaKnown RBP14.01□□□□□ -0.17
VPREB3-201ENST00000248948 PARP2Q9UGN5 583 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 ATP6V1DQ9Y5K8 247 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 VWA8A3KMH1 1905 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 PLXNA3P51805 1871 aa14.01□□□□□ -0.17
VPREB3-201ENST00000248948 A0A087X0B3 334 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 NT5C1B-RDH14C9J2C7 533 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 SRGAP2BP0DMP2 458 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 GAP43P17677 238 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 KCNA5P22460 613 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 KRT85P78386 507 aa14□□□□□ -0.17
VPREB3-201ENST00000248948 DNM1Q05193 864 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms