RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 MAB21L3Q8N8X9 362 aa11.71□□□□□ -0.53
COPA-201ENST00000241704 RAB20Q9NX57 234 aa11.71□□□□□ -0.53
COPA-201ENST00000241704 OPLAHO14841 1288 aa11.71□□□□□ -0.53
COPA-201ENST00000241704 MESDQ14696 234 aa11.71□□□□□ -0.53
COPA-201ENST00000241704 UAP1Q16222 522 aaPredicted RBP11.71□□□□□ -0.53
COPA-201ENST00000241704 ACBD5Q5T8D3 534 aaPredicted RBP11.71□□□□□ -0.53
COPA-201ENST00000241704 PDZD4Q76G19 769 aaPredicted RBP11.71□□□□□ -0.53
COPA-201ENST00000241704 GPRC5AQ8NFJ5 357 aa11.71□□□□□ -0.53
COPA-201ENST00000241704 LRRC4Q9HBW1 653 aa11.71□□□□□ -0.53
COPA-201ENST00000241704 STOML1Q9UBI4 398 aa11.71□□□□□ -0.53
COPA-201ENST00000241704 PGRMC1O00264 195 aaKnown RBP11.71□□□□□ -0.54
COPA-201ENST00000241704 LIN7AO14910 233 aaPredicted RBP11.71□□□□□ -0.54
COPA-201ENST00000241704 PRLRP16471 622 aa11.71□□□□□ -0.54
COPA-201ENST00000241704 ITIH4Q14624 930 aa11.71□□□□□ -0.54
COPA-201ENST00000241704 FBXL5Q9UKA1 691 aa11.71□□□□□ -0.54
COPA-201ENST00000241704 TFR2Q9UP52 801 aa11.71□□□□□ -0.54
COPA-201ENST00000241704 IGF2BP3O00425 579 aaKnown RBP eCLIP11.71□□□□□ -0.543e-9■■■■■ 27.8
COPA-201ENST00000241704 SLC16A4O15374 487 aa11.71□□□□□ -0.54
COPA-201ENST00000241704 XRCC4Q13426 336 aa11.71□□□□□ -0.54
COPA-201ENST00000241704 ACCSLQ4AC99 568 aa11.71□□□□□ -0.54
COPA-201ENST00000241704 BSPRYQ5W0U4 402 aa11.71□□□□□ -0.54
COPA-201ENST00000241704 VPS52Q8N1B4 723 aa11.71□□□□□ -0.54
COPA-201ENST00000241704 ARHGAP24Q8N264 748 aa11.71□□□□□ -0.54
COPA-201ENST00000241704 ZNF653Q96CK0 615 aa11.71□□□□□ -0.54
COPA-201ENST00000241704 PBKQ96KB5 322 aa11.71□□□□□ -0.54
COPA-201ENST00000241704 LBHD1Q9BQE6 289 aaPredicted RBP11.71□□□□□ -0.54
COPA-201ENST00000241704 NUDT12Q9BQG2 462 aa11.71□□□□□ -0.54
COPA-201ENST00000241704 CENPKQ9BS16 269 aa11.71□□□□□ -0.54
COPA-201ENST00000241704 CLDN3O15551 220 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 IFNB1P01574 187 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 TOB1P50616 345 aaPredicted RBP11.7□□□□□ -0.54
COPA-201ENST00000241704 GRIK3Q13003 919 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 CASC4Q6P4E1 433 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 OR6J1Q8NGC5 347 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 GCNAQ96QF7 691 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 PDXKO00764 312 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 ATP5HO75947 161 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 ATP4AP20648 1035 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 CAP2P40123 477 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 PKN1Q16512 942 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 TKFCQ3LXA3 575 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 C6orf118Q5T5N4 469 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 MAP1SQ66K74 1059 aaPredicted RBP11.7□□□□□ -0.54
COPA-201ENST00000241704 KCTD17Q8N5Z5 321 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 RAB3IL1Q8TBN0 382 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 HDAC7Q8WUI4 952 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 FMO2Q99518 471 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 DDX23Q9BUQ8 820 aaKnown RBP11.7□□□□□ -0.54
COPA-201ENST00000241704 LRRC4BQ9NT99 713 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 SMARCAL1Q9NZC9 954 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 DNAJC12Q9UKB3 198 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 DDTLA6NHG4 134 aaPredicted RBP11.7□□□□□ -0.54
COPA-201ENST00000241704 MYMKA6NI61 221 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 WTIPA6NIX2 430 aaPredicted RBP11.7□□□□□ -0.54
COPA-201ENST00000241704 TRAPPC3O43617 180 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 NUGGCQ68CJ6 796 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 SPATA24Q86W54 205 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 OR2W6PQ8NHA6 318 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 ETNK1Q9HBU6 452 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 LRRC53A6NM62 1247 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 H0Y3Z8 333 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 THAP12O43422 761 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 CIB2O75838 187 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 SLC25A27O95847 323 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 CDC25CP30307 473 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 STK4Q13043 487 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 FYB2Q5VWT5 728 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 ARMCX2Q7L311 632 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 ZC3H18Q86VM9 953 aaKnown RBP11.7□□□□□ -0.54
COPA-201ENST00000241704 GRK7Q8WTQ7 553 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 EDEM3Q9BZQ6 932 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 FHDC1Q9C0D6 1143 aaPredicted RBP11.7□□□□□ -0.54
COPA-201ENST00000241704 IL17RBQ9NRM6 502 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 DLGAP2Q9P1A6 1054 aa11.7□□□□□ -0.54
COPA-201ENST00000241704 ANXA13P27216 316 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 GTF2A2P52657 109 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 HERVK_113P62684 666 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 RHPN2Q8IUC4 686 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 CCDC89Q8N998 374 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 RIOX1Q9H6W3 641 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 SLC9A2Q9UBY0 812 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 OPHN1O60890 802 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 ITKQ08881 620 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 CDKAL1Q5VV42 579 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 ERO1BQ86YB8 467 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 ABTB1Q969K4 478 aaPredicted RBP11.69□□□□□ -0.54
COPA-201ENST00000241704 ZNF668Q96K58 619 aaPredicted RBP11.69□□□□□ -0.54
COPA-201ENST00000241704 NUDCD1Q96RS6 583 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 CCDC188H7C350 402 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 GGPS1O95749 300 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 RPA1P27694 616 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 BYSLQ13895 437 aaKnown RBP11.69□□□□□ -0.54
COPA-201ENST00000241704 GEN1Q17RS7 908 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 CWF19L1Q69YN2 538 aaKnown RBP11.69□□□□□ -0.54
COPA-201ENST00000241704 CD302Q8IX05 232 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 SCYL3Q8IZE3 742 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 UHMK1Q8TAS1 419 aaKnown RBP11.69□□□□□ -0.54
COPA-201ENST00000241704 ANKS1AQ92625 1134 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 HPS3Q969F9 1004 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 GMCL1Q96IK5 515 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms