RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 KLRG2A4D1S0 409 aaPredicted RBP15.1■□□□□ 0.01
SF1-201ENST00000227503 POTEFA5A3E0 1075 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 BTNL10A8MVZ5 291 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 POTEIP0CG38 1075 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 BRAFP15056 766 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 HOXD13P35453 343 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 CASP4P49662 377 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 CTTNQ14247 550 aaKnown RBP15.1■□□□□ 0.01
SF1-201ENST00000227503 MUM1Q2TAK8 710 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 RFWD3Q6PCD5 774 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 POTEGQ6S5H5 508 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 POTEEQ6S8J3 1075 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 SRRM1Q8IYB3 904 aaKnown RBP15.1■□□□□ 0.01
SF1-201ENST00000227503 DDX50Q9BQ39 737 aaKnown RBP15.1■□□□□ 0.01
SF1-201ENST00000227503 THAP2Q9H0W7 228 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 CDC42EP4Q9H3Q1 356 aaKnown RBP15.1■□□□□ 0.01
SF1-201ENST00000227503 SLCO1B3Q9NPD5 702 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 CYP39A1Q9NYL5 469 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 PRKAG3Q9UGI9 489 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 PCDHA1Q9Y5I3 950 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 LRRC37AA6NMS7 1700 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 CETN3O15182 167 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 CETPP11597 493 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 CHKAP35790 457 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 CCNG1P51959 295 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 KLC1Q07866 573 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 RBM26Q5T8P6 1007 aaKnown RBP15.1■□□□□ 0.01
SF1-201ENST00000227503 INTS8Q75QN2 995 aaKnown RBP15.1■□□□□ 0.01
SF1-201ENST00000227503 CATSPER3Q86XQ3 398 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 CCNJLQ8IV13 435 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 SP8Q8IXZ3 490 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 DNAJC9Q8WXX5 260 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 TRIM7Q9C029 511 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 GLT8D2Q9H1C3 349 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 WDR35Q9P2L0 1181 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 MEIS2O14770 477 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 CLIC2O15247 247 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 CCNB1P14635 433 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 SCNN1DP51172 638 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 PSMC6P62333 389 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 NFIAQ12857 509 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 GIT2Q14161 759 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 APOBEC3HQ6NTF7 200 aaKnown RBP15.1■□□□□ 0.01
SF1-201ENST00000227503 CCDC137Q6PK04 289 aaKnown RBP15.1■□□□□ 0.01
SF1-201ENST00000227503 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.1■□□□□ 0.012e-12■□□□□ 10.2
SF1-201ENST00000227503 GBP7Q8N8V2 638 aaPredicted RBP15.1■□□□□ 0.01
SF1-201ENST00000227503 ETNPPLQ8TBG4 499 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 DNAJC18Q9H819 358 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 LMCD1Q9NZU5 365 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 TRAF3IP3Q9Y228 551 aa15.1■□□□□ 0.01
SF1-201ENST00000227503 KRT18P05783 430 aaKnown RBP15.09■□□□□ 0.01
SF1-201ENST00000227503 ALDH3A1P30838 453 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 SSR1P43307 286 aaKnown RBP15.09■□□□□ 0.01
SF1-201ENST00000227503 VPS41P49754 854 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 DNAJC3Q13217 504 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 RCN2Q14257 317 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 MOXD1Q6UVY6 613 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 ZFPM1Q8IX07 1006 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 SLFN12Q8IYM2 578 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 CKAP2Q8WWK9 683 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 TBC1D10AQ9BXI6 508 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 DENND2DQ9H6A0 471 aaPredicted RBP15.09■□□□□ 0.01
SF1-201ENST00000227503 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.09■□□□□ 0.011e-6■■■■■ 260.6
SF1-201ENST00000227503 GCNT4Q9P109 453 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 CHKBQ9Y259 395 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 ASB3Q9Y575 518 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 PPEF1O14829 653 aaPredicted RBP15.09■□□□□ 0.01
SF1-201ENST00000227503 SPAG7O75391 227 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 SPATA31C1P0DKV0 1188 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 SHROOM1Q2M3G4 852 aaPredicted RBP15.09■□□□□ 0.01
SF1-201ENST00000227503 EPM2AIP1Q7L775 607 aaPredicted RBP15.09■□□□□ 0.01
SF1-201ENST00000227503 APBB1IPQ7Z5R6 666 aaPredicted RBP15.09■□□□□ 0.01
SF1-201ENST00000227503 FRMD5Q7Z6J6 570 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 CCDC105Q8IYK2 499 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 SYCE1Q8N0S2 351 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 TEX9Q8N6V9 391 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 ITFG2Q969R8 447 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 UBE2OQ9C0C9 1292 aaKnown RBP15.09■□□□□ 0.01
SF1-201ENST00000227503 NMRK1Q9NWW6 199 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 MTRF1LQ9UGC7 380 aaKnown RBP15.09■□□□□ 0.01
SF1-201ENST00000227503 INTUQ9ULD6 942 aa15.09■□□□□ 0.01
SF1-201ENST00000227503 HLA-DOAP06340 250 aa15.08■□□□□ 0.01
SF1-201ENST00000227503 PYGBP11216 843 aa15.08■□□□□ 0.01
SF1-201ENST00000227503 GCLCP48506 637 aaPredicted RBP15.08■□□□□ 0.01
SF1-201ENST00000227503 MRPS35P82673 323 aaKnown RBP15.08■□□□□ 0.01
SF1-201ENST00000227503 KYNUQ16719 465 aa15.08■□□□□ 0.01
SF1-201ENST00000227503 RFX8Q6ZV50 586 aa15.08■□□□□ 0.01
SF1-201ENST00000227503 DRAXINQ8NBI3 349 aaPredicted RBP15.08■□□□□ 0.01
SF1-201ENST00000227503 DTX3LQ8TDB6 740 aa15.08■□□□□ 0.01
SF1-201ENST00000227503 MKL1Q969V6 931 aa15.08■□□□□ 0.01
SF1-201ENST00000227503 GORASP1Q9BQQ3 440 aa15.08■□□□□ 0.01
SF1-201ENST00000227503 UBR3Q6ZT12 1888 aa15.08■□□□□ 0
SF1-201ENST00000227503 ADAMTSL1Q8N6G6 1762 aa15.08■□□□□ 0
SF1-201ENST00000227503 ATMINO43313 823 aaPredicted RBP15.08■□□□□ 0
SF1-201ENST00000227503 VCAM1P19320 739 aa15.08■□□□□ 0
SF1-201ENST00000227503 KCNA1Q09470 495 aa15.08■□□□□ 0
SF1-201ENST00000227503 RPUSD2Q8IZ73 545 aaKnown RBP15.08■□□□□ 0
SF1-201ENST00000227503 ASAP3Q8TDY4 903 aa15.08■□□□□ 0
SF1-201ENST00000227503 LENG9Q96B70 501 aa15.08■□□□□ 0
SF1-201ENST00000227503 BTBD6Q96KE9 485 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms