RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 ZBTB33Q86T24 672 aa18.07■□□□□ 0.48
CHMP5-201ENST00000223500 IRF2BP1Q8IU81 584 aa18.07■□□□□ 0.48
CHMP5-201ENST00000223500 HIPK3Q9H422 1215 aa18.07■□□□□ 0.48
CHMP5-201ENST00000223500 PDZD7Q9H5P4 517 aa18.07■□□□□ 0.48
CHMP5-201ENST00000223500 PTPRHQ9HD43 1115 aa18.07■□□□□ 0.48
CHMP5-201ENST00000223500 TMEM39AQ9NV64 488 aa18.07■□□□□ 0.48
CHMP5-201ENST00000223500 ST3GAL5Q9UNP4 418 aa18.07■□□□□ 0.48
CHMP5-201ENST00000223500 PIN4Q9Y237 131 aaKnown RBP18.07■□□□□ 0.48
CHMP5-201ENST00000223500 MAPK13O15264 365 aa18.06■□□□□ 0.48
CHMP5-201ENST00000223500 OGTO15294 1046 aa18.06■□□□□ 0.48
CHMP5-201ENST00000223500 AKAP3O75969 853 aa18.06■□□□□ 0.48
CHMP5-201ENST00000223500 CLTBP09497 229 aa18.06■□□□□ 0.48
CHMP5-201ENST00000223500 ATP1A3P13637 1013 aa18.06■□□□□ 0.48
CHMP5-201ENST00000223500 KYAT1Q16773 422 aa18.06■□□□□ 0.48
CHMP5-201ENST00000223500 DCAF4L1Q3SXM0 396 aa18.06■□□□□ 0.48
CHMP5-201ENST00000223500 EEF1DP3Q658K8 133 aa18.06■□□□□ 0.48
CHMP5-201ENST00000223500 SLC27A1Q6PCB7 646 aa18.06■□□□□ 0.48
CHMP5-201ENST00000223500 SAAL1Q96ER3 474 aa18.06■□□□□ 0.48
CHMP5-201ENST00000223500 NOC4LQ9BVI4 516 aaKnown RBP18.06■□□□□ 0.48
CHMP5-201ENST00000223500 CHST12Q9NRB3 414 aa18.06■□□□□ 0.48
CHMP5-201ENST00000223500 ARMCX3Q9UH62 379 aaPredicted RBP18.06■□□□□ 0.48
CHMP5-201ENST00000223500 LIMA1Q9UHB6 759 aaKnown RBP18.06■□□□□ 0.48
CHMP5-201ENST00000223500 GOLGA8IPA6NC78 632 aa18.05■□□□□ 0.48
CHMP5-201ENST00000223500 ZNF233A6NK53 670 aa18.05■□□□□ 0.48
CHMP5-201ENST00000223500 GOLGA8JA6NMD2 632 aa18.05■□□□□ 0.48
CHMP5-201ENST00000223500 KRT13P13646 458 aa18.05■□□□□ 0.48
CHMP5-201ENST00000223500 ZSCAN20P17040 1043 aaPredicted RBP18.05■□□□□ 0.48
CHMP5-201ENST00000223500 HOXA11P31270 313 aaPredicted RBP18.05■□□□□ 0.48
CHMP5-201ENST00000223500 CASP4P49662 377 aa18.05■□□□□ 0.48
CHMP5-201ENST00000223500 MARSP56192 900 aaKnown RBP18.05■□□□□ 0.48
CHMP5-201ENST00000223500 FANCCQ00597 558 aa18.05■□□□□ 0.48
CHMP5-201ENST00000223500 LPIN1Q14693 890 aa18.05■□□□□ 0.48
CHMP5-201ENST00000223500 FILIP1LQ4L180 1135 aa18.05■□□□□ 0.48
CHMP5-201ENST00000223500 TRAF7Q6Q0C0 670 aa18.05■□□□□ 0.48
CHMP5-201ENST00000223500 FAM43BQ6ZT52 329 aaPredicted RBP18.05■□□□□ 0.48
CHMP5-201ENST00000223500 UBE2Q1Q7Z7E8 422 aa18.05■□□□□ 0.48
CHMP5-201ENST00000223500 RDH13Q8NBN7 331 aa18.05■□□□□ 0.48
CHMP5-201ENST00000223500 FBXL18Q96ME1 805 aa18.05■□□□□ 0.48
CHMP5-201ENST00000223500 FAM213AQ9BRX8 229 aa18.05■□□□□ 0.48
CHMP5-201ENST00000223500 TRIM6Q9C030 488 aaPredicted RBP18.05■□□□□ 0.48
CHMP5-201ENST00000223500 CDT1Q9H211 546 aa18.05■□□□□ 0.48
CHMP5-201ENST00000223500 ERVK-5Q9HDB9 667 aa18.05■□□□□ 0.48
CHMP5-201ENST00000223500 TBX21Q9UL17 535 aa18.05■□□□□ 0.48
CHMP5-201ENST00000223500 PADI3Q9ULW8 664 aa18.05■□□□□ 0.48
CHMP5-201ENST00000223500 ABLIM1O14639 778 aa18.04■□□□□ 0.48
CHMP5-201ENST00000223500 CD52P31358 61 aa18.04■□□□□ 0.48
CHMP5-201ENST00000223500 PPP2R3AQ06190 1150 aa18.04■□□□□ 0.48
CHMP5-201ENST00000223500 KRT31Q15323 416 aa18.04■□□□□ 0.48
CHMP5-201ENST00000223500 SNRNP35Q16560 246 aaKnown RBP18.04■□□□□ 0.48
CHMP5-201ENST00000223500 SARM1Q6SZW1 724 aa18.04■□□□□ 0.48
CHMP5-201ENST00000223500 INTS8Q75QN2 995 aaKnown RBP18.04■□□□□ 0.48
CHMP5-201ENST00000223500 USP37Q86T82 979 aa18.04■□□□□ 0.48
CHMP5-201ENST00000223500 CDR2LQ86X02 465 aaPredicted RBP18.04■□□□□ 0.48
CHMP5-201ENST00000223500 ANP32BQ92688 251 aaKnown RBP18.04■□□□□ 0.48
CHMP5-201ENST00000223500 TUBGCP2Q9BSJ2 902 aa18.04■□□□□ 0.48
CHMP5-201ENST00000223500 HAPLN2Q9GZV7 340 aa18.04■□□□□ 0.48
CHMP5-201ENST00000223500 AGO3Q9H9G7 860 aaKnown RBP18.04■□□□□ 0.48
CHMP5-201ENST00000223500 LRRC10BA6NIK2 292 aa18.03■□□□□ 0.48
CHMP5-201ENST00000223500 CBFA2T2O43439 604 aa18.03■□□□□ 0.48
CHMP5-201ENST00000223500 TPM3P06753 285 aa18.03■□□□□ 0.48
CHMP5-201ENST00000223500 PRKCSHP14314 528 aaPredicted RBP18.03■□□□□ 0.48
CHMP5-201ENST00000223500 MAN2A1Q16706 1144 aa18.03■□□□□ 0.48
CHMP5-201ENST00000223500 TWF2Q6IBS0 349 aaKnown RBP18.03■□□□□ 0.48
CHMP5-201ENST00000223500 PPP1R12CQ9BZL4 782 aa18.03■□□□□ 0.48
CHMP5-201ENST00000223500 TRIM5Q9C035 493 aa18.03■□□□□ 0.48
CHMP5-201ENST00000223500 NPTXRO95502 500 aa18.02■□□□□ 0.48
CHMP5-201ENST00000223500 ACOT2P49753 483 aa18.02■□□□□ 0.48
CHMP5-201ENST00000223500 COPB1P53618 953 aaKnown RBP18.02■□□□□ 0.48
CHMP5-201ENST00000223500 UBASH3AP57075 661 aa18.02■□□□□ 0.48
CHMP5-201ENST00000223500 POU5F1Q01860 360 aaKnown RBP18.02■□□□□ 0.48
CHMP5-201ENST00000223500 COL13A1Q5TAT6 717 aaPredicted RBP18.02■□□□□ 0.48
CHMP5-201ENST00000223500 CBWD2Q8IUF1 395 aa18.02■□□□□ 0.48
CHMP5-201ENST00000223500 TRIM59Q8IWR1 403 aa18.02■□□□□ 0.48
CHMP5-201ENST00000223500 THNSL1Q8IYQ7 743 aa18.02■□□□□ 0.48
CHMP5-201ENST00000223500 ABHD8Q96I13 439 aa18.02■□□□□ 0.48
CHMP5-201ENST00000223500 IFIH1Q9BYX4 1025 aaKnown RBP18.02■□□□□ 0.48
CHMP5-201ENST00000223500 TAB2Q9NYJ8 693 aa18.02■□□□□ 0.48
CHMP5-201ENST00000223500 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.02■□□□□ 0.48
CHMP5-201ENST00000223500 TANC1Q9C0D5 1861 aa18.02■□□□□ 0.48
CHMP5-201ENST00000223500 CITO14578 2027 aa18.01■□□□□ 0.47
CHMP5-201ENST00000223500 PES1O00541 588 aaKnown RBP18.01■□□□□ 0.47
CHMP5-201ENST00000223500 CLTAP09496 248 aa18.01■□□□□ 0.47
CHMP5-201ENST00000223500 ENPEPQ07075 957 aa18.01■□□□□ 0.47
CHMP5-201ENST00000223500 CYP24A1Q07973 514 aa18.01■□□□□ 0.47
CHMP5-201ENST00000223500 BFSP1Q12934 665 aa18.01■□□□□ 0.47
CHMP5-201ENST00000223500 MBTPS1Q14703 1052 aa18.01■□□□□ 0.47
CHMP5-201ENST00000223500 TCERG1LQ5VWI1 586 aa18.01■□□□□ 0.47
CHMP5-201ENST00000223500 HACE1Q8IYU2 909 aa18.01■□□□□ 0.47
CHMP5-201ENST00000223500 ZSWIM2Q8NEG5 633 aa18.01■□□□□ 0.47
CHMP5-201ENST00000223500 BORCS6Q96GS4 357 aa18.01■□□□□ 0.47
CHMP5-201ENST00000223500 MFSD14AQ96MC6 490 aa18.01■□□□□ 0.47
CHMP5-201ENST00000223500 CCDC94Q9BW85 323 aaPredicted RBP18.01■□□□□ 0.47
CHMP5-201ENST00000223500 FTHL17Q9BXU8 183 aa18.01■□□□□ 0.47
CHMP5-201ENST00000223500 VPS16Q9H269 839 aa18.01■□□□□ 0.47
CHMP5-201ENST00000223500 RPF1Q9H9Y2 349 aaKnown RBP18.01■□□□□ 0.47
CHMP5-201ENST00000223500 PRDM5Q9NQX1 630 aaPredicted RBP18.01■□□□□ 0.47
CHMP5-201ENST00000223500 RBAKQ9NYW8 714 aaPredicted RBP18.01■□□□□ 0.47
CHMP5-201ENST00000223500 IFNKQ9P0W0 207 aa18.01■□□□□ 0.47
CHMP5-201ENST00000223500 CPSF3Q9UKF6 684 aaKnown RBP18.01■□□□□ 0.47
CHMP5-201ENST00000223500 KIAA0355O15063 1070 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms