RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ATXN2LQ8WWM7 1075 aaKnown RBP18.57■□□□□ 0.56
USB1-201ENST00000219281 CCT6BQ92526 530 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 ZNF317Q96PQ6 595 aaPredicted RBP18.57■□□□□ 0.56
USB1-201ENST00000219281 JPH2Q9BR39 696 aaPredicted RBP18.57■□□□□ 0.56
USB1-201ENST00000219281 ACP6Q9NPH0 428 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 PGAP2Q9UHJ9 254 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 SYNPO2Q9UMS6 1093 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 PTPN22Q9Y2R2 807 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 PCDHA3Q9Y5H8 950 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 ANKRD63C9JTQ0 380 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 SLCO1A2P46721 670 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 C6orf118Q5T5N4 469 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 NOP9Q86U38 636 aaKnown RBP18.57■□□□□ 0.56
USB1-201ENST00000219281 CCDC105Q8IYK2 499 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 PLEKHO2Q8TD55 490 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 EPS8L3Q8TE67 593 aaKnown RBP18.57■□□□□ 0.56
USB1-201ENST00000219281 HVCN1Q96D96 273 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 WNT8AQ9H1J5 351 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 TMEM206Q9H813 350 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 ARHGEF10LQ9HCE6 1279 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 PARP2Q9UGN5 583 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 CNOT7Q9UIV1 285 aaKnown RBP18.57■□□□□ 0.56
USB1-201ENST00000219281 ZBTB21Q9ULJ3 1066 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 TRPC6Q9Y210 931 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 GGPS1O95749 300 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 ALAS1P13196 640 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 ADCY2Q08462 1091 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 CCDC197Q8NCU1 140 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 SLC16A10Q8TF71 515 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 ACCSQ96QU6 501 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 LARSQ9P2J5 1176 aaKnown RBP18.56■□□□□ 0.56
USB1-201ENST00000219281 MRPL11Q9Y3B7 192 aaKnown RBP18.56■□□□□ 0.56
USB1-201ENST00000219281 P4HA2O15460 535 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 COILP38432 576 aaPredicted RBP18.56■□□□□ 0.56
USB1-201ENST00000219281 KCNJ1P48048 391 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 ZYXQ15942 572 aaKnown RBP18.56■□□□□ 0.56
USB1-201ENST00000219281 NBPF9Q3BBW0 867 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 MIER3Q7Z3K6 550 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 FUKQ8N0W3 1084 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 MTMR14Q8NCE2 650 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 AGBL3Q8NEM8 1001 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 EPS8L1Q8TE68 723 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 CD101Q93033 1021 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 VTI1AQ96AJ9 217 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 ZBED3Q96IU2 234 aaPredicted RBP18.56■□□□□ 0.56
USB1-201ENST00000219281 VPS33BQ9H267 617 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 RANBP17Q9H2T7 1088 aaKnown RBP18.56■□□□□ 0.56
USB1-201ENST00000219281 KDM4CQ9H3R0 1056 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 HSPBP1Q9NZL4 362 aa18.56■□□□□ 0.56
USB1-201ENST00000219281 NOCTQ9UK39 431 aaKnown RBP18.56■□□□□ 0.56
USB1-201ENST00000219281 SCAF8Q9UPN6 1271 aaKnown RBP18.56■□□□□ 0.56
USB1-201ENST00000219281 CHUKO15111 745 aa18.55■□□□□ 0.56
USB1-201ENST00000219281 CYP26A1O43174 497 aa18.55■□□□□ 0.56
USB1-201ENST00000219281 RIPK2O43353 540 aa18.55■□□□□ 0.56
USB1-201ENST00000219281 SPOPO43791 374 aa18.55■□□□□ 0.56
USB1-201ENST00000219281 AGTP01019 485 aa18.55■□□□□ 0.56
USB1-201ENST00000219281 GBP1P32455 592 aa18.55■□□□□ 0.56
USB1-201ENST00000219281 FKBP1CQ5VVH2 108 aa18.55■□□□□ 0.56
USB1-201ENST00000219281 CYB5D1Q6P9G0 228 aa18.55■□□□□ 0.56
USB1-201ENST00000219281 SLC47A2Q86VL8 602 aa18.55■□□□□ 0.56
USB1-201ENST00000219281 SLC13A5Q86YT5 568 aaPredicted RBP18.55■□□□□ 0.56
USB1-201ENST00000219281 XXYLT1Q8NBI6 393 aa18.55■□□□□ 0.56
USB1-201ENST00000219281 ZKSCAN4Q969J2 545 aaPredicted RBP18.55■□□□□ 0.56
USB1-201ENST00000219281 PRMT1Q99873 361 aaKnown RBP18.55■□□□□ 0.56
USB1-201ENST00000219281 MXRA8Q9BRK3 442 aa18.55■□□□□ 0.56
USB1-201ENST00000219281 NUP85Q9BW27 656 aa18.55■□□□□ 0.56
USB1-201ENST00000219281 INTS9Q9NV88 658 aaKnown RBP18.55■□□□□ 0.56
USB1-201ENST00000219281 RBBP6Q7Z6E9 1792 aaKnown RBP18.55■□□□□ 0.56
USB1-201ENST00000219281 WNT10BO00744 389 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 TBC1D12O60347 775 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 RARAP10276 462 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 NIM1KQ8IY84 436 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 LRRC34Q8IZ02 419 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 ZNF564Q8TBZ8 553 aaPredicted RBP18.54■□□□□ 0.56
USB1-201ENST00000219281 ART4Q93070 314 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 SH2D3AQ9BRG2 576 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 GLIS2Q9BZE0 524 aaPredicted RBP18.54■□□□□ 0.56
USB1-201ENST00000219281 TMEM117Q9H0C3 514 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 DBR1Q9UK59 544 aaKnown RBP18.54■□□□□ 0.56
USB1-201ENST00000219281 MTUS1Q9ULD2 1270 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 GOLGA8IPA6NC78 632 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 GOLGA8JA6NMD2 632 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 MXI1P50539 228 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 RASA3Q14644 834 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 SLMAPQ14BN4 828 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 LLGL1Q15334 1064 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 TBC1D10BQ4KMP7 808 aaPredicted RBP18.54■□□□□ 0.56
USB1-201ENST00000219281 CCDC25Q86WR0 208 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 PARP9Q8IXQ6 854 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 FAM71AQ8IYT1 594 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 PPM1KQ8N3J5 372 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 MORC4Q8TE76 937 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 P3H4Q92791 437 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 KREMEN1Q96MU8 473 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 RIT2Q99578 217 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 CCDC113Q9H0I3 377 aa18.54■□□□□ 0.56
USB1-201ENST00000219281 CCT8L1PA6NM43 557 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 RASGRF2O14827 1237 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 MTA2O94776 668 aa18.53■□□□□ 0.56
USB1-201ENST00000219281 GHRP10912 638 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms