RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 CYP1A2P05177 515 aa23.78■■□□□ 1.4
HTATSF1-201ENST00000218364 VIL1P09327 827 aaKnown RBP23.78■■□□□ 1.4
HTATSF1-201ENST00000218364 SLC8A1P32418 973 aa23.78■■□□□ 1.4
HTATSF1-201ENST00000218364 RBM26Q5T8P6 1007 aaKnown RBP23.78■■□□□ 1.4
HTATSF1-201ENST00000218364 MSL1Q68DK7 614 aa23.78■■□□□ 1.4
HTATSF1-201ENST00000218364 ZNF746Q6NUN9 644 aaPredicted RBP23.78■■□□□ 1.4
HTATSF1-201ENST00000218364 KIAA0825Q8IV33 1275 aa23.78■■□□□ 1.4
HTATSF1-201ENST00000218364 SLCO2A1Q92959 643 aa23.78■■□□□ 1.4
HTATSF1-201ENST00000218364 ELAC2Q9BQ52 826 aaKnown RBP23.78■■□□□ 1.4
HTATSF1-201ENST00000218364 ZNF577Q9BSK1 485 aa23.78■■□□□ 1.4
HTATSF1-201ENST00000218364 MTFR1LQ9H019 292 aa23.78■■□□□ 1.4
HTATSF1-201ENST00000218364 LRRC19Q9H756 370 aa23.78■■□□□ 1.4
HTATSF1-201ENST00000218364 K7ENM7 598 aa23.78■■□□□ 1.4
HTATSF1-201ENST00000218364 MAPK13O15264 365 aa23.78■■□□□ 1.4
HTATSF1-201ENST00000218364 NOP9Q86U38 636 aaKnown RBP23.78■■□□□ 1.4
HTATSF1-201ENST00000218364 ARP10275 920 aa23.77■■□□□ 1.4
HTATSF1-201ENST00000218364 STAT2P52630 851 aa23.77■■□□□ 1.4
HTATSF1-201ENST00000218364 MCCD1P59942 119 aaPredicted RBP23.77■■□□□ 1.4
HTATSF1-201ENST00000218364 TRPM8Q7Z2W7 1104 aa23.77■■□□□ 1.4
HTATSF1-201ENST00000218364 UHMK1Q8TAS1 419 aaKnown RBP23.77■■□□□ 1.4
HTATSF1-201ENST00000218364 TEKT3Q9BXF9 490 aa23.77■■□□□ 1.4
HTATSF1-201ENST00000218364 EHMT1Q9H9B1 1298 aa23.77■■□□□ 1.4
HTATSF1-201ENST00000218364 ATRNL1Q5VV63 1379 aa23.77■■□□□ 1.4
HTATSF1-201ENST00000218364 GCLMP48507 274 aa23.77■■□□□ 1.4
HTATSF1-201ENST00000218364 EXOC3L1Q86VI1 746 aa23.77■■□□□ 1.4
HTATSF1-201ENST00000218364 PCIF1Q9H4Z3 704 aa23.77■■□□□ 1.4
HTATSF1-201ENST00000218364 VIMP08670 466 aaKnown RBP23.76■■□□□ 1.39
HTATSF1-201ENST00000218364 SLCO1A2P46721 670 aa23.76■■□□□ 1.39
HTATSF1-201ENST00000218364 ZNF564Q8TBZ8 553 aaPredicted RBP23.76■■□□□ 1.39
HTATSF1-201ENST00000218364 ANKRD31Q8N7Z5 1873 aa23.76■■□□□ 1.39
HTATSF1-201ENST00000218364 OAS1P00973 400 aaKnown RBP23.76■■□□□ 1.39
HTATSF1-201ENST00000218364 NPR1P16066 1061 aa23.76■■□□□ 1.39
HTATSF1-201ENST00000218364 RRP1BQ14684 758 aaKnown RBP23.76■■□□□ 1.39
HTATSF1-201ENST00000218364 PADI6Q6TGC4 694 aa23.76■■□□□ 1.39
HTATSF1-201ENST00000218364 SPICE1Q8N0Z3 855 aa23.76■■□□□ 1.39
HTATSF1-201ENST00000218364 KAT5Q92993 513 aa23.76■■□□□ 1.39
HTATSF1-201ENST00000218364 ACCSQ96QU6 501 aa23.76■■□□□ 1.39
HTATSF1-201ENST00000218364 LARSQ9P2J5 1176 aaKnown RBP23.76■■□□□ 1.39
HTATSF1-201ENST00000218364 CHORDC1Q9UHD1 332 aaPredicted RBP23.76■■□□□ 1.39
HTATSF1-201ENST00000218364 DBR1Q9UK59 544 aaKnown RBP23.76■■□□□ 1.39
HTATSF1-201ENST00000218364 ATP6V1G2O95670 118 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 ECEL1O95672 775 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 PDE6CP51160 858 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 RBM5P52756 815 aaKnown RBP eCLIP23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 MIGA2Q7L4E1 593 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 GIMAP7Q8NHV1 300 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 SCLT1Q96NL6 688 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 NUP85Q9BW27 656 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 HOMER3Q9NSC5 361 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 WHRNQ9P202 907 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 GTF3C4Q9UKN8 822 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 BCS1LQ9Y276 419 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 CFAP73A6NFT4 308 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 TP73O15350 636 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 SNX3O60493 162 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 RWDD2BP57060 319 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 UBXN2AP68543 259 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 PPP1R7Q15435 360 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 STRIP1Q5VSL9 837 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 HIBCHQ6NVY1 386 aaPredicted RBP23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 CEP57Q86XR8 500 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 CCDC63Q8NA47 563 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 PLEKHO2Q8TD55 490 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 RIT2Q99578 217 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 CBWD1Q9BRT8 395 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 DBNDD1Q9H9R9 158 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 UVRAGQ9P2Y5 699 aa23.75■■□□□ 1.39
HTATSF1-201ENST00000218364 TISP43B9A030 160 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 SPOPO43791 374 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 FMO1Q01740 532 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 CALCOCO2Q13137 446 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 RIPK1Q13546 671 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 RASA3Q14644 834 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 XXYLT1Q8NBI6 393 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 SERPINB12Q96P63 405 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 TMEM117Q9H0C3 514 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 PTPN22Q9Y2R2 807 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 FSCN2O14926 492 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 ATMINO43313 823 aaPredicted RBP23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 KCNJ1P48048 391 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 DACT2Q5SW24 774 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 RNF207Q6ZRF8 634 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 CPNE8Q86YQ8 564 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 PSPC1Q8WXF1 523 aaKnown RBP23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 KREMEN1Q96MU8 473 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 CDC42EP4Q9H3Q1 356 aaKnown RBP23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 AAASQ9NRG9 546 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 LOXHD1Q8IVV2 1947 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 EZRP15311 586 aaKnown RBP23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 RHBDF2Q6PJF5 856 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 SHC3Q92529 594 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 HSPBP1Q9NZL4 362 aa23.74■■□□□ 1.39
HTATSF1-201ENST00000218364 IPO5O00410 1097 aaKnown RBP23.73■■□□□ 1.39
HTATSF1-201ENST00000218364 ENTPD3O75355 529 aa23.73■■□□□ 1.39
HTATSF1-201ENST00000218364 ALDH1B1P30837 517 aa23.73■■□□□ 1.39
HTATSF1-201ENST00000218364 IFNAR2P48551 515 aa23.73■■□□□ 1.39
HTATSF1-201ENST00000218364 MXI1P50539 228 aa23.73■■□□□ 1.39
HTATSF1-201ENST00000218364 SNRPFP62306 86 aaKnown RBP23.73■■□□□ 1.39
HTATSF1-201ENST00000218364 RANBP17Q9H2T7 1088 aaKnown RBP23.73■■□□□ 1.39
HTATSF1-201ENST00000218364 NOD2Q9HC29 1040 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms