RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 DNM1LO00429 736 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 RARRES1P49788 294 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 MFAP3P55082 362 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 PPARDQ03181 441 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 TNFAIP8L3Q5GJ75 292 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 STYK1Q6J9G0 422 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 ZNF746Q6NUN9 644 aaPredicted RBP14.3□□□□□ -0.12
SRP54-201ENST00000216774 HAUS6Q7Z4H7 955 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 ANKS4BQ8N8V4 417 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 ZNF564Q8TBZ8 553 aaPredicted RBP14.3□□□□□ -0.12
SRP54-201ENST00000216774 SLCO2A1Q92959 643 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 AZI2Q9H6S1 392 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 ZNF536O15090 1300 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 EP400Q96L91 3159 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 BACH1O14867 736 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 DHX15O43143 795 aaKnown RBP14.29□□□□□ -0.12
SRP54-201ENST00000216774 RIPK2O43353 540 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 SPOPO43791 374 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 MFSD5Q6N075 450 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 CCDC91Q7Z6B0 441 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 CCDC105Q8IYK2 499 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 CCDC197Q8NCU1 140 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 PLEKHO2Q8TD55 490 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 SELENOSQ9BQE4 189 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 NUP85Q9BW27 656 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 TLDC2A0PJX2 215 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 DDX39AO00148 427 aaKnown RBP14.29□□□□□ -0.12
SRP54-201ENST00000216774 CHUKO15111 745 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 SCTRP47872 440 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 QARSP47897 775 aaKnown RBP14.29□□□□□ -0.12
SRP54-201ENST00000216774 RWDD2BP57060 319 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 FMO1Q01740 532 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 ITIH4Q14624 930 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 SIX1Q15475 284 aaPredicted RBP14.29□□□□□ -0.12
SRP54-201ENST00000216774 TRMT10CQ7L0Y3 403 aaKnown RBP14.29□□□□□ -0.12
SRP54-201ENST00000216774 MAEAQ7L5Y9 396 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 CCDC50Q8IVM0 306 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 KAT5Q92993 513 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 KREMEN1Q96MU8 473 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 PLVAPQ9BX97 442 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 ROPN1BQ9BZX4 212 aaPredicted RBP14.29□□□□□ -0.12
SRP54-201ENST00000216774 LRRC19Q9H756 370 aa14.29□□□□□ -0.12
SRP54-201ENST00000216774 ROPN1Q9HAT0 212 aaPredicted RBP14.29□□□□□ -0.12
SRP54-201ENST00000216774 FAM170AA1A519 330 aa14.28□□□□□ -0.12
SRP54-201ENST00000216774 CYP26A1O43174 497 aa14.28□□□□□ -0.12
SRP54-201ENST00000216774 ECEL1O95672 775 aa14.28□□□□□ -0.12
SRP54-201ENST00000216774 RARAP10276 462 aa14.28□□□□□ -0.12
SRP54-201ENST00000216774 NCKAP1LP55160 1127 aa14.28□□□□□ -0.12
SRP54-201ENST00000216774 IFI35P80217 286 aaPredicted RBP14.28□□□□□ -0.12
SRP54-201ENST00000216774 CDR2Q01850 454 aa14.28□□□□□ -0.12
SRP54-201ENST00000216774 TAOK1Q7L7X3 1001 aa14.28□□□□□ -0.12
SRP54-201ENST00000216774 SLC47A2Q86VL8 602 aa14.28□□□□□ -0.12
SRP54-201ENST00000216774 PPM1KQ8N3J5 372 aa14.28□□□□□ -0.12
SRP54-201ENST00000216774 INTS9Q9NV88 658 aaKnown RBP14.28□□□□□ -0.12
SRP54-201ENST00000216774 BCS1LQ9Y276 419 aa14.28□□□□□ -0.12
SRP54-201ENST00000216774 COQ4Q9Y3A0 265 aa14.28□□□□□ -0.12
SRP54-201ENST00000216774 RASGRF2O14827 1237 aa14.27□□□□□ -0.12
SRP54-201ENST00000216774 DNAJC8O75937 253 aaPredicted RBP14.27□□□□□ -0.12
SRP54-201ENST00000216774 ICAM1P05362 532 aa14.27□□□□□ -0.12
SRP54-201ENST00000216774 CYP11B1P15538 503 aa14.27□□□□□ -0.12
SRP54-201ENST00000216774 CALCOCO2Q13137 446 aa14.27□□□□□ -0.12
SRP54-201ENST00000216774 XRCC4Q13426 336 aa14.27□□□□□ -0.12
SRP54-201ENST00000216774 AOC3Q16853 763 aa14.27□□□□□ -0.12
SRP54-201ENST00000216774 SPRED3Q2MJR0 410 aa14.27□□□□□ -0.12
SRP54-201ENST00000216774 GRIPAP1Q4V328 841 aa14.27□□□□□ -0.12
SRP54-201ENST00000216774 KRT39Q6A163 491 aa14.27□□□□□ -0.12
SRP54-201ENST00000216774 PIGWQ7Z7B1 504 aa14.27□□□□□ -0.12
SRP54-201ENST00000216774 FAM151AQ8WW52 585 aa14.27□□□□□ -0.12
SRP54-201ENST00000216774 ZNF653Q96CK0 615 aa14.27□□□□□ -0.12
SRP54-201ENST00000216774 HVCN1Q96D96 273 aa14.27□□□□□ -0.12
SRP54-201ENST00000216774 SGSM3Q96HU1 749 aa14.27□□□□□ -0.12
SRP54-201ENST00000216774 AGO4Q9HCK5 861 aaKnown RBP14.27□□□□□ -0.12
SRP54-201ENST00000216774 WHRNQ9P202 907 aa14.27□□□□□ -0.12
SRP54-201ENST00000216774 EXOC7Q9UPT5 735 aa14.27□□□□□ -0.12
SRP54-201ENST00000216774 TCRBV7S2A1N4TA0A589 114 aa14.27□□□□□ -0.13
SRP54-201ENST00000216774 SPDYE2BA6NHP3 402 aa14.27□□□□□ -0.13
SRP54-201ENST00000216774 CCT8L1PA6NM43 557 aa14.27□□□□□ -0.13
SRP54-201ENST00000216774 TCP10L2B9ZVM9 353 aa14.27□□□□□ -0.13
SRP54-201ENST00000216774 H0YIN7 160 aa14.27□□□□□ -0.13
SRP54-201ENST00000216774 ATMINO43313 823 aaPredicted RBP14.27□□□□□ -0.13
SRP54-201ENST00000216774 SPDYE6P0CI01 402 aa14.27□□□□□ -0.13
SRP54-201ENST00000216774 FGFR4P22455 802 aa14.27□□□□□ -0.13
SRP54-201ENST00000216774 YWHABP31946 246 aaKnown RBP14.27□□□□□ -0.13
SRP54-201ENST00000216774 PDE6CP51160 858 aa14.27□□□□□ -0.13
SRP54-201ENST00000216774 GPC3P51654 580 aa14.27□□□□□ -0.13
SRP54-201ENST00000216774 SNRNP35Q16560 246 aaKnown RBP14.27□□□□□ -0.13
SRP54-201ENST00000216774 TKFCQ3LXA3 575 aa14.27□□□□□ -0.13
SRP54-201ENST00000216774 ZNF568Q3ZCX4 644 aa14.27□□□□□ -0.13
SRP54-201ENST00000216774 CYB5D1Q6P9G0 228 aa14.27□□□□□ -0.13
SRP54-201ENST00000216774 FUKQ8N0W3 1084 aa14.27□□□□□ -0.13
SRP54-201ENST00000216774 FLAD1Q8NFF5 587 aa14.27□□□□□ -0.13
SRP54-201ENST00000216774 KIFAP3Q92845 792 aa14.27□□□□□ -0.13
SRP54-201ENST00000216774 AKT1S1Q96B36 256 aa14.27□□□□□ -0.13
SRP54-201ENST00000216774 FSCN2O14926 492 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 ADRB2P07550 413 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 PTGER2P43116 358 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 GHRHRQ02643 423 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 MAP2K1Q02750 393 aaPredicted RBP14.26□□□□□ -0.13
SRP54-201ENST00000216774 AUHQ13825 339 aaKnown RBP14.26□□□□□ -0.13
SRP54-201ENST00000216774 PCNX4Q63HM2 1172 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms