RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 BICD1Q96G01 975 aa28.14■■■□□ 2.1
RTN4R-201ENST00000043402 SPATC1LQ9H0A9 340 aa28.14■■■□□ 2.1
RTN4R-201ENST00000043402 EPB41L5Q9HCM4 733 aa28.14■■■□□ 2.1
RTN4R-201ENST00000043402 AMFRQ9UKV5 643 aa28.14■■■□□ 2.1
RTN4R-201ENST00000043402 AGPSO00116 658 aa28.14■■■□□ 2.09
RTN4R-201ENST00000043402 RAD51CO43502 376 aa28.14■■■□□ 2.09
RTN4R-201ENST00000043402 CARSP49589 748 aaKnown RBP28.14■■■□□ 2.09
RTN4R-201ENST00000043402 EPHB4P54760 987 aa28.14■■■□□ 2.09
RTN4R-201ENST00000043402 GUCY2DQ02846 1103 aa28.14■■■□□ 2.09
RTN4R-201ENST00000043402 HSP90B2PQ58FF3 399 aa28.14■■■□□ 2.09
RTN4R-201ENST00000043402 GADL1Q6ZQY3 521 aa28.14■■■□□ 2.09
RTN4R-201ENST00000043402 SLC47A2Q86VL8 602 aa28.14■■■□□ 2.09
RTN4R-201ENST00000043402 RASGEF1CQ8N431 466 aa28.14■■■□□ 2.09
RTN4R-201ENST00000043402 CEP89Q96ST8 783 aa28.14■■■□□ 2.09
RTN4R-201ENST00000043402 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.14■■■□□ 2.09
RTN4R-201ENST00000043402 DHX33Q9H6R0 707 aaKnown RBP28.14■■■□□ 2.09
RTN4R-201ENST00000043402 RAB20Q9NX57 234 aa28.14■■■□□ 2.09
RTN4R-201ENST00000043402 NOC2LQ9Y3T9 749 aaKnown RBP28.14■■■□□ 2.09
RTN4R-201ENST00000043402 IGKV6D-21A0A0A0MT36 114 aa28.13■■■□□ 2.09
RTN4R-201ENST00000043402 EDNRBP24530 442 aa28.13■■■□□ 2.09
RTN4R-201ENST00000043402 MFAP3P55082 362 aa28.13■■■□□ 2.09
RTN4R-201ENST00000043402 TAF3Q5VWG9 929 aa28.13■■■□□ 2.09
RTN4R-201ENST00000043402 ASAP3Q8TDY4 903 aa28.13■■■□□ 2.09
RTN4R-201ENST00000043402 RIN2Q8WYP3 895 aaPredicted RBP28.13■■■□□ 2.09
RTN4R-201ENST00000043402 DCPSQ96C86 337 aaKnown RBP28.13■■■□□ 2.09
RTN4R-201ENST00000043402 PCYT2Q99447 389 aa28.13■■■□□ 2.09
RTN4R-201ENST00000043402 FBXO40Q9UH90 709 aa28.13■■■□□ 2.09
RTN4R-201ENST00000043402 PGRMC1O00264 195 aaKnown RBP28.13■■■□□ 2.09
RTN4R-201ENST00000043402 NCAPG2Q86XI2 1143 aa28.13■■■□□ 2.09
RTN4R-201ENST00000043402 SULF1Q8IWU6 871 aa28.13■■■□□ 2.09
RTN4R-201ENST00000043402 IFT20Q8IY31 132 aa28.13■■■□□ 2.09
RTN4R-201ENST00000043402 AP1M1Q9BXS5 423 aa28.13■■■□□ 2.09
RTN4R-201ENST00000043402 ELP3Q9H9T3 547 aa28.13■■■□□ 2.09
RTN4R-201ENST00000043402 GSTTP1A0A1W2PQM5 241 aa28.12■■■□□ 2.09
RTN4R-201ENST00000043402 DDX3YO15523 660 aaKnown RBP28.12■■■□□ 2.09
RTN4R-201ENST00000043402 FARP2O94887 1054 aaPredicted RBP28.12■■■□□ 2.09
RTN4R-201ENST00000043402 GLRA2P23416 452 aa28.12■■■□□ 2.09
RTN4R-201ENST00000043402 GTF2H1P32780 548 aa28.12■■■□□ 2.09
RTN4R-201ENST00000043402 GGCXP38435 758 aa28.12■■■□□ 2.09
RTN4R-201ENST00000043402 TNNC1P63316 161 aa28.12■■■□□ 2.09
RTN4R-201ENST00000043402 TRADDQ15628 312 aa28.12■■■□□ 2.09
RTN4R-201ENST00000043402 TATDN2Q93075 761 aa28.12■■■□□ 2.09
RTN4R-201ENST00000043402 PORCNQ9H237 461 aa28.12■■■□□ 2.09
RTN4R-201ENST00000043402 EMBQ6PCB8 327 aa28.11■■■□□ 2.09
RTN4R-201ENST00000043402 ZNF516Q92618 1163 aa28.11■■■□□ 2.09
RTN4R-201ENST00000043402 OTUD5Q96G74 571 aa28.11■■■□□ 2.09
RTN4R-201ENST00000043402 CLMNQ96JQ2 1002 aa28.11■■■□□ 2.09
RTN4R-201ENST00000043402 A0A0G2JLL6 359 aaPredicted RBP28.11■■■□□ 2.09
RTN4R-201ENST00000043402 DCAF12L1Q5VU92 463 aa28.11■■■□□ 2.09
RTN4R-201ENST00000043402 PRRT2Q7Z6L0 340 aaPredicted RBP28.11■■■□□ 2.09
RTN4R-201ENST00000043402 NT5C1BQ96P26 610 aa28.11■■■□□ 2.09
RTN4R-201ENST00000043402 HAPLN2Q9GZV7 340 aa28.11■■■□□ 2.09
RTN4R-201ENST00000043402 NFU1Q9UMS0 254 aa28.11■■■□□ 2.09
RTN4R-201ENST00000043402 H0YCG3 227 aa28.1■■■□□ 2.09
RTN4R-201ENST00000043402 MMEP08473 750 aa28.1■■■□□ 2.09
RTN4R-201ENST00000043402 LIG4P49917 911 aa28.1■■■□□ 2.09
RTN4R-201ENST00000043402 WNT7BP56706 349 aa28.1■■■□□ 2.09
RTN4R-201ENST00000043402 CASKIN2Q8WXE0 1202 aa28.1■■■□□ 2.09
RTN4R-201ENST00000043402 CAVIN3Q969G5 261 aa28.1■■■□□ 2.09
RTN4R-201ENST00000043402 CALR3Q96L12 384 aaKnown RBP28.1■■■□□ 2.09
RTN4R-201ENST00000043402 PAGR1Q9BTK6 254 aa28.1■■■□□ 2.09
RTN4R-201ENST00000043402 NIFKQ9BYG3 293 aaKnown RBP28.1■■■□□ 2.09
RTN4R-201ENST00000043402 ZNF233A6NK53 670 aa28.1■■■□□ 2.09
RTN4R-201ENST00000043402 RTN2O75298 545 aa28.1■■■□□ 2.09
RTN4R-201ENST00000043402 ARL2P36404 184 aa28.1■■■□□ 2.09
RTN4R-201ENST00000043402 HADHBP55084 474 aaKnown RBP28.1■■■□□ 2.09
RTN4R-201ENST00000043402 FMO1Q01740 532 aa28.1■■■□□ 2.09
RTN4R-201ENST00000043402 MOB2Q70IA6 237 aa28.1■■■□□ 2.09
RTN4R-201ENST00000043402 USP37Q86T82 979 aa28.1■■■□□ 2.09
RTN4R-201ENST00000043402 RHOT2Q8IXI1 618 aa28.1■■■□□ 2.09
RTN4R-201ENST00000043402 TSEN2Q8NCE0 465 aaKnown RBP28.1■■■□□ 2.09
RTN4R-201ENST00000043402 DHX38Q92620 1227 aaKnown RBP28.1■■■□□ 2.09
RTN4R-201ENST00000043402 PI4K2AQ9BTU6 479 aa28.1■■■□□ 2.09
RTN4R-201ENST00000043402 CHORDC1Q9UHD1 332 aaPredicted RBP28.1■■■□□ 2.09
RTN4R-201ENST00000043402 ZNFX1Q9P2E3 1918 aaKnown RBP28.09■■■□□ 2.09
RTN4R-201ENST00000043402 CNMDO75829 334 aa28.09■■■□□ 2.09
RTN4R-201ENST00000043402 ITGA4P13612 1032 aa28.09■■■□□ 2.09
RTN4R-201ENST00000043402 CYP11B1P15538 503 aa28.09■■■□□ 2.09
RTN4R-201ENST00000043402 C15orf39Q6ZRI6 1047 aa28.09■■■□□ 2.09
RTN4R-201ENST00000043402 IFT81Q8WYA0 676 aa28.09■■■□□ 2.09
RTN4R-201ENST00000043402 EXOC4Q96A65 974 aa28.09■■■□□ 2.09
RTN4R-201ENST00000043402 STYXL1Q9Y6J8 313 aa28.09■■■□□ 2.09
RTN4R-201ENST00000043402 EXTL3O43909 919 aa28.09■■■□□ 2.09
RTN4R-201ENST00000043402 RNF40O75150 1001 aa28.09■■■□□ 2.09
RTN4R-201ENST00000043402 FAM153BP0C7A2 387 aa28.09■■■□□ 2.09
RTN4R-201ENST00000043402 FAM153CQ494X1 144 aa28.09■■■□□ 2.09
RTN4R-201ENST00000043402 EEPD1Q7L9B9 569 aa28.09■■■□□ 2.09
RTN4R-201ENST00000043402 PROCA1Q8NCQ7 364 aaPredicted RBP28.09■■■□□ 2.09
RTN4R-201ENST00000043402 ASCC2Q9H1I8 757 aaPredicted RBP28.09■■■□□ 2.09
RTN4R-201ENST00000043402 FAM153AQ9UHL3 310 aa28.09■■■□□ 2.09
RTN4R-201ENST00000043402 GZMAP12544 262 aa28.08■■■□□ 2.09
RTN4R-201ENST00000043402 NAMPTP43490 491 aa28.08■■■□□ 2.09
RTN4R-201ENST00000043402 NLRP11P59045 1033 aaKnown RBP28.08■■■□□ 2.09
RTN4R-201ENST00000043402 GPC5P78333 572 aa28.08■■■□□ 2.09
RTN4R-201ENST00000043402 IRX3P78415 501 aaPredicted RBP28.08■■■□□ 2.09
RTN4R-201ENST00000043402 ENPEPQ07075 957 aa28.08■■■□□ 2.09
RTN4R-201ENST00000043402 TCEAL1Q15170 157 aa28.08■■■□□ 2.09
RTN4R-201ENST00000043402 LMBRD2Q68DH5 695 aaPredicted RBP28.08■■■□□ 2.09
RTN4R-201ENST00000043402 PSPC1Q8WXF1 523 aaKnown RBP28.08■■■□□ 2.09
RTN4R-201ENST00000043402 KCNN1Q92952 543 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms