RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Creb1Q01147 341 aaKnown RBP12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 CpQ61147 1061 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Adgrg6Q6F3F9 1165 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Klhdc10Q6PAR0 439 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 PhkbQ7TSH2 1085 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Rapgef5Q8C0Q9 814 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Dtnbp1Q91WZ8 352 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Snx10Q9CWT3 201 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Tlr5Q9JLF7 859 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Adcy7P51829 1099 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Rhox12Q4TU81 186 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Ctc1Q5SUQ9 1212 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Thoc1Q8R3N6 657 aaKnown RBP12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Rpa1Q8VEE4 623 aaKnown RBP12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Q9CYI0 393 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Snf8Q9CZ28 258 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Fam187aQ9D3R5 417 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Tmed2Q9R0Q3 201 aa12.86□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Gm6583E9Q8Z1 469 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Gm3182K7N6T8 263 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Usp35M0QWN7 1009 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Slc27a3O88561 667 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Ect2Q07139 913 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Klrb1Q0ZUP1 214 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Palb2Q3U0P1 1104 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Vwa3aQ3UVV9 1148 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Ntrk3Q6VNS1 825 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 PaoxQ8C0L6 504 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Myef2Q8C854 591 aaKnown RBP12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Kcnv2Q8CFS6 562 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Gpsm2Q8VDU0 679 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Hdac9Q99N13 588 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Mphosph6Q9D1Q1 161 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Lonrf2B2RT44 518 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Olfr552E9Q545 317 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Gm21962L7N280 338 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Gm7995L7N2E4 160 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Yipf3Q3UDR8 347 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 OgdhQ60597 1023 aaKnown RBP12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Birc2Q62210 612 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Peg10Q7TN75 958 aaKnown RBP12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Proser2Q8C5R2 471 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Mboat7Q8CHK3 473 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Rsrc1Q9DBU6 334 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Extl2Q9ES89 330 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Znf354bQ9QXT9 601 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Trim43bP86448 445 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Spata18Q0P557 537 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Afg3l2Q8JZQ2 802 aaKnown RBP12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Kiaa0391Q8JZY4 584 aaKnown RBP12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 D630039A03RikQ8K0M7 236 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Hspbp1Q99P31 357 aaKnown RBP12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Cmtm5Q9D6G9 156 aa12.85□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Oip5A2AQ14 241 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Usp17lbE9Q9U0 468 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Ifnb1P01575 182 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Tp53P02340 387 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 E2f7Q6S7F2 904 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 WdpcpQ8C456 722 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Cabs1Q8C633 391 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 ClasrpQ8CFC7 668 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 MyripQ8K3I4 856 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Foxp3Q99JB6 429 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Q99KU6 348 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Nsmce1Q9D720 266 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Olr1Q9EQ09 363 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Cyth1Q9QX11 398 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Fer1l6E0CZ42 1862 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Fam205aA2APU8 1308 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Ebf2O08792 575 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Pabpn1lQ5XFR0 273 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Zbtb17Q60821 794 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Ppp2r5cQ60996 524 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Uts2bQ765I1 113 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Trpa1Q8BLA8 1125 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Slc14a1Q8VHL0 384 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Sec14l2Q99J08 403 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Mrpl11Q9CQF0 192 aaKnown RBP12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Rbm31yQ9D3U4 565 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Cyp2ab1S4R196 498 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 March10E9PX79 788 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Sar1aP36536 198 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 PorP37040 678 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Q3UTZ3 580 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Odr4Q4PJX1 447 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Large2Q5XPT3 690 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Zcchc2Q69ZB8 1166 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Ubap1Q8BH48 502 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 4930519G04RikQ9CPT7 205 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Akt1s1Q9D1F4 257 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Rnf6Q9DBU5 667 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Lypla2Q9WTL7 231 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Cib2Q9Z309 187 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 SynrgQ5SV85 1306 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Ifi207E9Q3L4 978 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Syt2P46097 422 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Aars2Q14CH7 980 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Nt5c2Q3V1L4 560 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 Brip1Q5SXJ3 1174 aa12.84□□□□□ -0.35
Rfx1-201ENSMUST00000005600 FancbQ5XJY6 703 aa12.84□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms