RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 ZNF165P49910 485 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 RAB27AP51159 221 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 CYP2J2P51589 502 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 YARSP54577 528 aaKnown RBP14.16□□□□□ -0.14
PHGDH-220ENST00000641570 STX17P56962 302 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 CCDC40Q4G0X9 1142 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 SLC27A1Q6PCB7 646 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 MPZL3Q6UWV2 235 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 EPM2AIP1Q7L775 607 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-220ENST00000641570 ZBTB33Q86T24 672 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 FAM228AQ86W67 206 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 CSGALNACT2Q8N6G5 542 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 SCLYQ96I15 445 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 CPB2Q96IY4 423 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 CCDC94Q9BW85 323 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-220ENST00000641570 TARS2Q9BW92 718 aaKnown RBP14.16□□□□□ -0.14
PHGDH-220ENST00000641570 CCDC113Q9H0I3 377 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 MTIF3Q9H2K0 278 aaKnown RBP14.16□□□□□ -0.14
PHGDH-220ENST00000641570 FZD8Q9H461 694 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 AGPAT5Q9NUQ2 364 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 PADI3Q9ULW8 664 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 EFCAB14O75071 495 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 CLSTN1O94985 981 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 NR3C1P04150 777 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 KRT13P13646 458 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 CDK11BP21127 795 aaKnown RBP14.15□□□□□ -0.14
PHGDH-220ENST00000641570 GARTP22102 1010 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 NR2F2P24468 414 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 ZNF445P59923 1031 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 FKBP3Q00688 224 aaKnown RBP14.15□□□□□ -0.14
PHGDH-220ENST00000641570 MYL5Q02045 173 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 FPGSQ05932 587 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 LPIN1Q14693 890 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 CEP135Q66GS9 1140 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 MFSD5Q6N075 450 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 UBE2Q1Q7Z7E8 422 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 PGBD4Q96DM1 585 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 CTAGE1Q96RT6 745 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 FIZ1Q96SL8 496 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 ACO2Q99798 780 aaKnown RBP14.15□□□□□ -0.14
PHGDH-220ENST00000641570 FGFBP2Q9BYJ0 223 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 CDHR5Q9HBB8 845 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 KIAA1586Q9HCI6 787 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 AGPAT3Q9NRZ7 376 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 AGO2Q9UKV8 859 aaKnown RBP14.15□□□□□ -0.14
PHGDH-220ENST00000641570 LRFN2Q9ULH4 789 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 TNFSF13BQ9Y275 285 aa14.15□□□□□ -0.14
PHGDH-220ENST00000641570 R3HCC1Q9Y3T6 440 aaKnown RBP14.15□□□□□ -0.14
PHGDH-220ENST00000641570 CLIC2O15247 247 aa14.14□□□□□ -0.15
PHGDH-220ENST00000641570 PPP1R37O75864 691 aa14.14□□□□□ -0.15
PHGDH-220ENST00000641570 NPTXRO95502 500 aa14.14□□□□□ -0.15
PHGDH-220ENST00000641570 GNA14O95837 355 aa14.14□□□□□ -0.15
PHGDH-220ENST00000641570 MCF2P10911 925 aa14.14□□□□□ -0.15
PHGDH-220ENST00000641570 ARF4P18085 180 aaPredicted RBP14.14□□□□□ -0.15
PHGDH-220ENST00000641570 KCNJ6P48051 423 aa14.14□□□□□ -0.15
PHGDH-220ENST00000641570 ADAM9Q13443 819 aa14.14□□□□□ -0.15
PHGDH-220ENST00000641570 IKBKEQ14164 716 aa14.14□□□□□ -0.15
PHGDH-220ENST00000641570 EDRF1Q3B7T1 1238 aa14.14□□□□□ -0.15
PHGDH-220ENST00000641570 AOPEPQ8N6M6 819 aa14.14□□□□□ -0.15
PHGDH-220ENST00000641570 XXYLT1Q8NBI6 393 aa14.14□□□□□ -0.15
PHGDH-220ENST00000641570 RNF169Q8NCN4 708 aa14.14□□□□□ -0.15
PHGDH-220ENST00000641570 GLIS3Q8NEA6 775 aa14.14□□□□□ -0.15
PHGDH-220ENST00000641570 FAM200AQ8TCP9 573 aa14.14□□□□□ -0.15
PHGDH-220ENST00000641570 MINDY3Q9H8M7 445 aa14.14□□□□□ -0.15
PHGDH-220ENST00000641570 TOPORSQ9NS56 1045 aaPredicted RBP14.14□□□□□ -0.15
PHGDH-220ENST00000641570 C1orf112Q9NSG2 853 aa14.14□□□□□ -0.15
PHGDH-220ENST00000641570 WDR81Q562E7 1941 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 KIAA0100Q14667 2235 aaKnown RBP14.13□□□□□ -0.15
PHGDH-220ENST00000641570 ZBBXA8MT70 800 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 PPP1R3GB7ZBB8 358 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 PES1O00541 588 aaKnown RBP14.13□□□□□ -0.15
PHGDH-220ENST00000641570 B4GALT5O43286 388 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 PIGRP01833 764 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 CNKSR3Q6P9H4 555 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 PSRC1Q6PGN9 363 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-220ENST00000641570 ABI1Q8IZP0 508 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 GPD1LQ8N335 351 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 TMEM40Q8WWA1 233 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 KCNN1Q92952 543 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 FNBP1Q96RU3 617 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 RPS6KC1Q96S38 1066 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 BPIFA3Q9BQP9 254 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 APOL6Q9BWW8 343 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 PCIF1Q9H4Z3 704 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 PDZD7Q9H5P4 517 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 ERVK-5Q9HDB9 667 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 HSPBP1Q9NZL4 362 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 ZMYND8Q9ULU4 1186 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-220ENST00000641570 TRAF3IP3Q9Y228 551 aa14.13□□□□□ -0.15
PHGDH-220ENST00000641570 TRIM43BA6NCK2 446 aa14.12□□□□□ -0.15
PHGDH-220ENST00000641570 OGTO15294 1046 aa14.12□□□□□ -0.15
PHGDH-220ENST00000641570 SLC16A3O15427 465 aaKnown RBP14.12□□□□□ -0.15
PHGDH-220ENST00000641570 CAPN15O75808 1086 aa14.12□□□□□ -0.15
PHGDH-220ENST00000641570 STAG3L1P0CL83 205 aa14.12□□□□□ -0.15
PHGDH-220ENST00000641570 SYN1P17600 705 aa14.12□□□□□ -0.15
PHGDH-220ENST00000641570 PSMC2P35998 433 aaKnown RBP14.12□□□□□ -0.15
PHGDH-220ENST00000641570 SPAG1Q07617 926 aa14.12□□□□□ -0.15
PHGDH-220ENST00000641570 KCNA1Q09470 495 aa14.12□□□□□ -0.15
PHGDH-220ENST00000641570 MYBPC2Q14324 1141 aa14.12□□□□□ -0.15
PHGDH-220ENST00000641570 SPATA1Q5VX52 437 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms