RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 BHMT2Q9H2M3 363 aa27.9■■■□□ 2.06
VEGFA-232ENST00000640653 EPHX3Q9H6B9 360 aa27.9■■■□□ 2.06
VEGFA-232ENST00000640653 DDX19AQ9NUU7 478 aaKnown RBP27.9■■■□□ 2.06
VEGFA-232ENST00000640653 B4GALT5O43286 388 aa27.89■■■□□ 2.06
VEGFA-232ENST00000640653 DDHD2O94830 711 aa27.89■■■□□ 2.06
VEGFA-232ENST00000640653 ALDH2P05091 517 aa27.89■■■□□ 2.06
VEGFA-232ENST00000640653 PPP2R5AQ15172 486 aa27.89■■■□□ 2.06
VEGFA-232ENST00000640653 FAM187BQ17R55 369 aa27.89■■■□□ 2.06
VEGFA-232ENST00000640653 ZBP1Q9H171 429 aa27.89■■■□□ 2.06
VEGFA-232ENST00000640653 GIT1Q9Y2X7 761 aa27.89■■■□□ 2.06
VEGFA-232ENST00000640653 NCOR1O75376 2440 aa27.89■■■□□ 2.05
VEGFA-232ENST00000640653 A0A1B0GUA9 196 aa27.88■■■□□ 2.05
VEGFA-232ENST00000640653 C2orf71A6NGG8 1288 aa27.88■■■□□ 2.05
VEGFA-232ENST00000640653 C19orf67A6NJJ6 358 aa27.88■■■□□ 2.05
VEGFA-232ENST00000640653 INPPL1O15357 1258 aa27.88■■■□□ 2.05
VEGFA-232ENST00000640653 CXCL14O95715 111 aa27.88■■■□□ 2.05
VEGFA-232ENST00000640653 NAMPTP43490 491 aa27.88■■■□□ 2.05
VEGFA-232ENST00000640653 AFF1P51825 1210 aaKnown RBP27.88■■■□□ 2.05
VEGFA-232ENST00000640653 RBM10P98175 930 aaKnown RBP27.88■■■□□ 2.05
VEGFA-232ENST00000640653 KCNC3Q14003 757 aa27.88■■■□□ 2.05
VEGFA-232ENST00000640653 GIT2Q14161 759 aa27.88■■■□□ 2.05
VEGFA-232ENST00000640653 TMEM87AQ8NBN3 555 aa27.88■■■□□ 2.05
VEGFA-232ENST00000640653 DEPTORQ8TB45 409 aa27.88■■■□□ 2.05
VEGFA-232ENST00000640653 KHSRPQ92945 711 aaKnown RBP eCLIP27.88■■■□□ 2.051e-9■■■□□ 15.1
VEGFA-232ENST00000640653 IFT74Q96LB3 600 aa27.88■■■□□ 2.05
VEGFA-232ENST00000640653 APOL6Q9BWW8 343 aa27.88■■■□□ 2.05
VEGFA-232ENST00000640653 RNF39Q9H2S5 420 aa27.88■■■□□ 2.05
VEGFA-232ENST00000640653 FZD8Q9H461 694 aa27.88■■■□□ 2.05
VEGFA-232ENST00000640653 DNM3Q9UQ16 869 aa27.88■■■□□ 2.05
VEGFA-232ENST00000640653 FAN1Q9Y2M0 1017 aa27.88■■■□□ 2.05
VEGFA-232ENST00000640653 HES2Q9Y543 173 aa27.88■■■□□ 2.05
VEGFA-232ENST00000640653 ARL5CA6NH57 179 aa27.87■■■□□ 2.05
VEGFA-232ENST00000640653 PI4K2BG5E9Z4 385 aa27.87■■■□□ 2.05
VEGFA-232ENST00000640653 B4GALT3O60512 393 aa27.87■■■□□ 2.05
VEGFA-232ENST00000640653 NPTXRO95502 500 aa27.87■■■□□ 2.05
VEGFA-232ENST00000640653 MLH1P40692 756 aa27.87■■■□□ 2.05
VEGFA-232ENST00000640653 ATP2C1P98194 919 aaPredicted RBP27.87■■■□□ 2.05
VEGFA-232ENST00000640653 MAPK6Q16659 721 aa27.87■■■□□ 2.05
VEGFA-232ENST00000640653 LLGL2Q6P1M3 1020 aa27.87■■■□□ 2.05
VEGFA-232ENST00000640653 BCL7CQ8WUZ0 217 aaPredicted RBP27.87■■■□□ 2.05
VEGFA-232ENST00000640653 BSNDQ8WZ55 320 aa27.87■■■□□ 2.05
VEGFA-232ENST00000640653 KIFAP3Q92845 792 aa27.87■■■□□ 2.05
VEGFA-232ENST00000640653 GAD1Q99259 594 aa27.87■■■□□ 2.05
VEGFA-232ENST00000640653 NXF3Q9H4D5 531 aaKnown RBP27.87■■■□□ 2.05
VEGFA-232ENST00000640653 USP15Q9Y4E8 981 aaPredicted RBP27.87■■■□□ 2.05
VEGFA-232ENST00000640653 BDP1A6H8Y1 2624 aa27.86■■■□□ 2.05
VEGFA-232ENST00000640653 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.86■■■□□ 2.05
VEGFA-232ENST00000640653 CTSAP10619 480 aa27.86■■■□□ 2.05
VEGFA-232ENST00000640653 IL17AQ16552 155 aa27.86■■■□□ 2.05
VEGFA-232ENST00000640653 TMEM132AQ24JP5 1023 aa27.86■■■□□ 2.05
VEGFA-232ENST00000640653 LARP1BQ659C4 914 aaKnown RBP27.86■■■□□ 2.05
VEGFA-232ENST00000640653 ANKRD54Q6NXT1 300 aa27.86■■■□□ 2.05
VEGFA-232ENST00000640653 CDR2LQ86X02 465 aaPredicted RBP27.86■■■□□ 2.05
VEGFA-232ENST00000640653 CASP10Q92851 521 aa27.86■■■□□ 2.05
VEGFA-232ENST00000640653 PP2D1A8MPX8 630 aa27.85■■■□□ 2.05
VEGFA-232ENST00000640653 NRP1O14786 923 aa27.85■■■□□ 2.05
VEGFA-232ENST00000640653 N4BP3O15049 544 aa27.85■■■□□ 2.05
VEGFA-232ENST00000640653 IRAK3Q9Y616 596 aa27.85■■■□□ 2.05
VEGFA-232ENST00000640653 ZMYM2Q9UBW7 1377 aa27.85■■■□□ 2.05
VEGFA-232ENST00000640653 CLASP2O75122 1294 aaKnown RBP27.84■■■□□ 2.05
VEGFA-232ENST00000640653 PRKCBP05771 671 aa27.84■■■□□ 2.05
VEGFA-232ENST00000640653 ALADP13716 330 aa27.84■■■□□ 2.05
VEGFA-232ENST00000640653 HOXB8P17481 243 aaPredicted RBP27.84■■■□□ 2.05
VEGFA-232ENST00000640653 SCNN1GP51170 649 aa27.84■■■□□ 2.05
VEGFA-232ENST00000640653 PRPF4BQ13523 1007 aaKnown RBP27.84■■■□□ 2.05
VEGFA-232ENST00000640653 ZFP42Q96MM3 310 aa27.84■■■□□ 2.05
VEGFA-232ENST00000640653 HCFC2Q9Y5Z7 792 aa27.84■■■□□ 2.05
VEGFA-232ENST00000640653 E9PMD0 336 aa27.83■■■□□ 2.05
VEGFA-232ENST00000640653 NR1I2O75469 434 aa27.83■■■□□ 2.05
VEGFA-232ENST00000640653 AKAP5P24588 427 aa27.83■■■□□ 2.05
VEGFA-232ENST00000640653 CDC25AP30304 524 aa27.83■■■□□ 2.05
VEGFA-232ENST00000640653 OR1G1P47890 313 aa27.83■■■□□ 2.05
VEGFA-232ENST00000640653 EFNA5P52803 228 aa27.83■■■□□ 2.05
VEGFA-232ENST00000640653 COLGALT2Q8IYK4 626 aa27.83■■■□□ 2.05
VEGFA-232ENST00000640653 AUTS2Q8WXX7 1259 aa27.83■■■□□ 2.05
VEGFA-232ENST00000640653 ADPGKQ9BRR6 497 aa27.83■■■□□ 2.05
VEGFA-232ENST00000640653 CCDC113Q9H0I3 377 aa27.83■■■□□ 2.05
VEGFA-232ENST00000640653 DAXXQ9UER7 740 aaPredicted RBP27.83■■■□□ 2.05
VEGFA-232ENST00000640653 PARP2Q9UGN5 583 aa27.83■■■□□ 2.05
VEGFA-232ENST00000640653 ACKR2O00590 384 aa27.82■■■□□ 2.04
VEGFA-232ENST00000640653 LIG1P18858 919 aa27.82■■■□□ 2.04
VEGFA-232ENST00000640653 DSC1Q08554 894 aa27.82■■■□□ 2.04
VEGFA-232ENST00000640653 TPRNQ4KMQ1 711 aa27.82■■■□□ 2.04
VEGFA-232ENST00000640653 TMEM31Q5JXX7 168 aa27.82■■■□□ 2.04
VEGFA-232ENST00000640653 ARL6IP4Q66PJ3 421 aaKnown RBP27.82■■■□□ 2.04
VEGFA-232ENST00000640653 SUSD6Q92537 303 aa27.82■■■□□ 2.04
VEGFA-232ENST00000640653 RPS6KC1Q96S38 1066 aa27.82■■■□□ 2.04
VEGFA-232ENST00000640653 MMTAG2Q9BU76 263 aaKnown RBP27.82■■■□□ 2.04
VEGFA-232ENST00000640653 VN1R3Q9BXE9 311 aa27.82■■■□□ 2.04
VEGFA-232ENST00000640653 PDZD7Q9H5P4 517 aa27.82■■■□□ 2.04
VEGFA-232ENST00000640653 MIOSQ9NXC5 875 aa27.82■■■□□ 2.04
VEGFA-232ENST00000640653 PRG3Q9Y2Y8 225 aaPredicted RBP27.82■■■□□ 2.04
VEGFA-232ENST00000640653 DCXO43602 365 aa27.81■■■□□ 2.04
VEGFA-232ENST00000640653 SYCE2Q6PIF2 218 aa27.81■■■□□ 2.04
VEGFA-232ENST00000640653 KCTD17Q8N5Z5 321 aa27.81■■■□□ 2.04
VEGFA-232ENST00000640653 PHF7Q9BWX1 381 aaPredicted RBP27.81■■■□□ 2.04
VEGFA-232ENST00000640653 S1PR5Q9H228 398 aa27.81■■■□□ 2.04
VEGFA-232ENST00000640653 POLD4Q9HCU8 107 aa27.81■■■□□ 2.04
VEGFA-232ENST00000640653 VWA3AA6NCI4 1184 aa27.8■■■□□ 2.04
VEGFA-232ENST00000640653 GPR37L1O60883 481 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms