RNA–Protein interactions for RNA: ENST00000640313.1

VPS35-212, Transcript of VPS35, retromer complex component, humanhuman

TSL 5 BASIC

Gene VPS35, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-212ENST00000640313 MAN2A1Q16706 1144 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 TM4SF20Q53R12 229 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 CATSPEREQ5SY80 951 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 FAM102AQ5T9C2 384 aaPredicted RBP1.05□□□□□ -2.24
VPS35-212ENST00000640313 MORN5Q5VZ52 161 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 ZNF626Q68DY1 528 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 SLC9A4Q6AI14 798 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 KIAA1161Q6NSJ0 714 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 NSMFQ6X4W1 530 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 Q6ZTC4 211 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 MEPCEQ7L2J0 689 aaKnown RBP1.05□□□□□ -2.24
VPS35-212ENST00000640313 VGLL2Q8N8G2 317 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 ACTRT2Q8TDY3 377 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 E2F7Q96AV8 911 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 ARMC5Q96C12 935 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 IL17RAQ96F46 866 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 WBP1Q96G27 269 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 HEPHQ9BQS7 1158 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 AARSD1Q9BTE6 412 aaKnown RBP1.05□□□□□ -2.24
VPS35-212ENST00000640313 HIRIP3Q9BW71 556 aaPredicted RBP1.05□□□□□ -2.24
VPS35-212ENST00000640313 SEMA4CQ9C0C4 833 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 UNKLQ9H9P5 680 aaKnown RBP1.05□□□□□ -2.24
VPS35-212ENST00000640313 TMEM74BQ9NUR3 256 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 ASB6Q9NWX5 421 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 ACTR10Q9NZ32 417 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 USP36Q9P275 1121 aaKnown RBP1.05□□□□□ -2.24
VPS35-212ENST00000640313 HDAC5Q9UQL6 1122 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 TBC1D30Q9Y2I9 924 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 MAP3K2Q9Y2U5 619 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 ENTPD2Q9Y5L3 495 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 KAT6AQ92794 2004 aa1.05□□□□□ -2.24
VPS35-212ENST00000640313 OBSCNQ5VST9 7968 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 NOTCH3Q9UM47 2321 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 CCDC66A2RUB6 948 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 BLACEA4D250 179 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 FAM221BA6H8Z2 402 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 IQCA1LA6NCM1 817 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 PRR5-ARHGAP8B1AHC4 643 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 KCNK3O14649 394 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 PPEF2O14830 753 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 SMAD7O15105 426 aaKnown RBP1.04□□□□□ -2.24
VPS35-212ENST00000640313 FSBPO95073 299 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 PRLP01236 227 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 CKBP12277 381 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 HSP90B1P14625 803 aaKnown RBP1.04□□□□□ -2.24
VPS35-212ENST00000640313 GPD1P21695 349 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 NR4A2P43354 598 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 RGS3P49796 1198 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 GZMKP49863 264 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 ZNF134P52741 427 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 BCAR1P56945 870 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 SLC6A3Q01959 620 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 SLC10A2Q12908 348 aaPredicted RBP1.04□□□□□ -2.24
VPS35-212ENST00000640313 FHL3Q13643 280 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 SPDYE7PQ495Y7 208 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 TNNI3KQ59H18 835 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 FAM47CQ5HY64 1035 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 AKNAD1Q5T1N1 836 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 LARP1BQ659C4 914 aaKnown RBP1.04□□□□□ -2.24
VPS35-212ENST00000640313 FCRLBQ6BAA4 426 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 CC2D1AQ6P1N0 951 aaPredicted RBP1.04□□□□□ -2.24
VPS35-212ENST00000640313 KRT73Q86Y46 540 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 TMEM132CQ8N3T6 1108 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 OR10H5Q8NGA6 315 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 OR5M3Q8NGP4 307 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 PPP1R14CQ8TAE6 165 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 DENND1AQ8TEH3 1009 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 PTPRN2Q92932 1015 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 ANAPC16Q96DE5 110 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 HMCESQ96FZ2 354 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 BOD1Q96IK1 185 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 MAML3Q96JK9 1138 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 MARK4Q96L34 752 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 UIMC1Q96RL1 719 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 ARID3AQ99856 593 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 TMEM79Q9BSE2 394 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 TRAIPQ9BWF2 469 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 BACH2Q9BYV9 841 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 EPC1Q9H2F5 836 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 EBF3Q9H4W6 596 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 ANLNQ9NQW6 1124 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 ARHGEF4Q9NR80 690 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 IL17RBQ9NRM6 502 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 TBCCD1Q9NVR7 557 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 ING3Q9NXR8 418 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 DNAI1Q9UI46 699 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 SYNPO2Q9UMS6 1093 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 ZKSCAN5Q9Y2L8 839 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 TRAF6Q9Y4K3 522 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 PCDHA8Q9Y5H6 950 aa1.04□□□□□ -2.24
VPS35-212ENST00000640313 A0A0A6YYJ9 748 aa1.03□□□□□ -2.24
VPS35-212ENST00000640313 TRAV20A0A0B4J274 112 aa1.03□□□□□ -2.24
VPS35-212ENST00000640313 TBKBP1A7MCY6 615 aa1.03□□□□□ -2.24
VPS35-212ENST00000640313 MAFGO15525 162 aa1.03□□□□□ -2.24
VPS35-212ENST00000640313 ALDH1A2O94788 518 aa1.03□□□□□ -2.24
VPS35-212ENST00000640313 GJB6O95452 261 aa1.03□□□□□ -2.24
VPS35-212ENST00000640313 LATS1O95835 1130 aa1.03□□□□□ -2.24
VPS35-212ENST00000640313 ELANEP08246 267 aa1.03□□□□□ -2.24
VPS35-212ENST00000640313 SRGAP2CP0DJJ0 459 aa1.03□□□□□ -2.24
VPS35-212ENST00000640313 GAAP10253 952 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms