RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 BASP1P80723 227 aaKnown RBP9.18□□□□□ -0.94
HNRNPU-219ENST00000639628 KRT17Q04695 432 aa9.18□□□□□ -0.94
HNRNPU-219ENST00000639628 PTGISQ16647 500 aa9.18□□□□□ -0.94
HNRNPU-219ENST00000639628 GJB7Q6PEY0 223 aa9.18□□□□□ -0.94
HNRNPU-219ENST00000639628 ZNF571Q7Z3V5 609 aaPredicted RBP9.18□□□□□ -0.94
HNRNPU-219ENST00000639628 TBC1D1Q86TI0 1168 aaPredicted RBP9.18□□□□□ -0.94
HNRNPU-219ENST00000639628 C4orf32Q8N8J7 132 aa9.18□□□□□ -0.94
HNRNPU-219ENST00000639628 OR2W6PQ8NHA6 318 aa9.18□□□□□ -0.94
HNRNPU-219ENST00000639628 OLFML3Q9NRN5 406 aa9.18□□□□□ -0.94
HNRNPU-219ENST00000639628 BCS1LQ9Y276 419 aa9.18□□□□□ -0.94
HNRNPU-219ENST00000639628 PARP4Q9UKK3 1724 aaKnown RBP9.18□□□□□ -0.94
HNRNPU-219ENST00000639628 SPATA31A6Q5VVP1 1343 aa9.18□□□□□ -0.94
HNRNPU-219ENST00000639628 CES2O00748 559 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 AKAP3O75969 853 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 MT-ND3P03897 115 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 GNA15P30679 374 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 SNRNP35Q16560 246 aaKnown RBP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 MIIPQ5JXC2 388 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 SWSAP1Q6NVH7 229 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 PAXIP1Q6ZW49 1069 aaPredicted RBP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 ZBTB33Q86T24 672 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 SRRM1Q8IYB3 904 aaKnown RBP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 KCTD6Q8NC69 237 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 ATL2Q8NHH9 583 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 AENQ8WTP8 325 aaKnown RBP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 FAM151AQ8WW52 585 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 LPAR1Q92633 364 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 CALN1Q9BXU9 219 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 IP6K2Q9UHH9 426 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 WDR46O15213 610 aaKnown RBP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 MAPK13O15264 365 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 TLR3O15455 904 aaKnown RBP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 SHMT1P34896 483 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 CASP4P49662 377 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 KCTD2Q14681 263 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 STXBP2Q15833 593 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 MUM1Q2TAK8 710 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 SUPT20HL1Q3ZLR7 823 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 SNRNP48Q6IEG0 339 aaKnown RBP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 PHLDB3Q6NSJ2 640 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 GADL1Q6ZQY3 521 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 PCGF5Q86SE9 256 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 MICAL1Q8TDZ2 1067 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 PPP4R1Q8TF05 950 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 C1orf54Q8WWF1 131 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 ARL8AQ96BM9 186 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 MTRQ99707 1265 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 NUDT12Q9BQG2 462 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 TUBB6Q9BUF5 446 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 CELF4Q9BZC1 486 aaKnown RBP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 STRIP2Q9ULQ0 834 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 CHD2O14647 1828 aaKnown RBP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 DGAT1O75907 488 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 ITIH2P19823 946 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 COMTP21964 271 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 FGFR4P22455 802 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 HNRNPH3P31942 346 aaKnown RBP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 AMPD2Q01433 879 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 MKRN3Q13064 507 aaKnown RBP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 ZNF772Q68DY9 489 aaPredicted RBP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 EPM2AIP1Q7L775 607 aaPredicted RBP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 TRIM50Q86XT4 487 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 ZNF354CQ86Y25 554 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 PASD1Q8IV76 773 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 GMCL1P1Q8NEA9 526 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 GABPB2Q8TAK5 448 aaPredicted RBP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 FAM167AQ96KS9 214 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 FAM129AQ9BZQ8 928 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 MAD1L1Q9Y6D9 718 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 A6NJR5 290 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 DCTN3O75935 186 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 MYCNP04198 464 aaPredicted RBP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 GLI1P08151 1106 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 PSMA2P25787 234 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 ARL4CP56559 192 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 BBS9Q3SYG4 887 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 FOXR2Q6PJQ5 311 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 CDKL2Q92772 493 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 RNF25Q96BH1 459 aaPredicted RBP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 XPO6Q96QU8 1125 aaKnown RBP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 TRAIPQ9BWF2 469 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 PPP1R12CQ9BZL4 782 aa9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 POLR3FQ9H1D9 316 aaPredicted RBP9.17□□□□□ -0.94
HNRNPU-219ENST00000639628 HSPA9P38646 679 aaKnown RBP9.16□□□□□ -0.94
HNRNPU-219ENST00000639628 BSPRYQ5W0U4 402 aa9.16□□□□□ -0.94
HNRNPU-219ENST00000639628 DARS2Q6PI48 645 aaKnown RBP9.16□□□□□ -0.94
HNRNPU-219ENST00000639628 LRRC55Q6ZSA7 311 aa9.16□□□□□ -0.94
HNRNPU-219ENST00000639628 C3orf20Q8ND61 904 aa9.16□□□□□ -0.94
HNRNPU-219ENST00000639628 RNF34Q969K3 372 aa9.16□□□□□ -0.94
HNRNPU-219ENST00000639628 AGO2Q9UKV8 859 aaKnown RBP9.16□□□□□ -0.94
HNRNPU-219ENST00000639628 COMMD10Q9Y6G5 202 aa9.16□□□□□ -0.94
HNRNPU-219ENST00000639628 GAKO14976 1311 aa9.16□□□□□ -0.94
HNRNPU-219ENST00000639628 CFAP73A6NFT4 308 aa9.16□□□□□ -0.94
HNRNPU-219ENST00000639628 ATP5HO75947 161 aa9.16□□□□□ -0.94
HNRNPU-219ENST00000639628 MAP7D1Q3KQU3 841 aa9.16□□□□□ -0.94
HNRNPU-219ENST00000639628 KCNK18Q7Z418 384 aa9.16□□□□□ -0.94
HNRNPU-219ENST00000639628 SDCCAG8Q86SQ7 713 aaPredicted RBP9.16□□□□□ -0.94
HNRNPU-219ENST00000639628 IRF2BP1Q8IU81 584 aa9.16□□□□□ -0.94
HNRNPU-219ENST00000639628 KSR1Q8IVT5 923 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms