RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 ZDHHC18Q9NUE0 388 aa13.02□□□□□ -0.33
GFAP-228ENST00000638488 PLSCR1O15162 318 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 ATP9AO75110 1047 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 POU5F1Q01860 360 aaKnown RBP13.01□□□□□ -0.33
GFAP-228ENST00000638488 C10orf76Q5T2E6 689 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 GALNT17Q6IS24 598 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 APOBEC3HQ6NTF7 200 aaKnown RBP13.01□□□□□ -0.33
GFAP-228ENST00000638488 DAGLBQ8NCG7 672 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 SMC1BQ8NDV3 1235 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 RMI1Q9H9A7 625 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 KBTBD4Q9NVX7 518 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 WDR37Q9Y2I8 494 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 TLDC2A0PJX2 215 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 TTLL1O95922 423 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 RASSF2P50749 326 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 TMED1Q13445 227 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 RASA3Q14644 834 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 SPDYAQ5MJ70 313 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 INTS8Q75QN2 995 aaKnown RBP13.01□□□□□ -0.33
GFAP-228ENST00000638488 KRT25Q7Z3Z0 450 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 REXO1Q8N1G1 1221 aaKnown RBP13.01□□□□□ -0.33
GFAP-228ENST00000638488 ANKLE1Q8NAG6 615 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 CKAP2Q8WWK9 683 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 RNF25Q96BH1 459 aaPredicted RBP13.01□□□□□ -0.33
GFAP-228ENST00000638488 CCDC97Q96F63 343 aaPredicted RBP13.01□□□□□ -0.33
GFAP-228ENST00000638488 BZW2Q9Y6E2 419 aaKnown RBP13.01□□□□□ -0.33
GFAP-228ENST00000638488 LRRC37AA6NMS7 1700 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 LTBP1Q14766 1721 aa13.01□□□□□ -0.33
GFAP-228ENST00000638488 H0YIN7 160 aa13□□□□□ -0.33
GFAP-228ENST00000638488 TRAFD1O14545 582 aaPredicted RBP13□□□□□ -0.33
GFAP-228ENST00000638488 SHMT1P34896 483 aa13□□□□□ -0.33
GFAP-228ENST00000638488 NAALADL2Q58DX5 795 aa13□□□□□ -0.33
GFAP-228ENST00000638488 RASIP1Q5U651 963 aa13□□□□□ -0.33
GFAP-228ENST00000638488 SFMBT2Q5VUG0 894 aa13□□□□□ -0.33
GFAP-228ENST00000638488 CEP128Q6ZU80 1094 aa13□□□□□ -0.33
GFAP-228ENST00000638488 NEK8Q86SG6 692 aa13□□□□□ -0.33
GFAP-228ENST00000638488 SUPT20HQ8NEM7 779 aa13□□□□□ -0.33
GFAP-228ENST00000638488 UIMC1Q96RL1 719 aa13□□□□□ -0.33
GFAP-228ENST00000638488 PPP1R12CQ9BZL4 782 aa13□□□□□ -0.33
GFAP-228ENST00000638488 IL1RAPL1Q9NZN1 696 aa13□□□□□ -0.33
GFAP-228ENST00000638488 CEP72Q9P209 647 aa13□□□□□ -0.33
GFAP-228ENST00000638488 ATP8B3O60423 1300 aa13□□□□□ -0.33
GFAP-228ENST00000638488 TMEM221A6NGB7 291 aa13□□□□□ -0.33
GFAP-228ENST00000638488 FGFR1OPO95684 399 aaKnown RBP13□□□□□ -0.33
GFAP-228ENST00000638488 OR52Z1P0C646 297 aa13□□□□□ -0.33
GFAP-228ENST00000638488 TXKP42681 527 aa13□□□□□ -0.33
GFAP-228ENST00000638488 DRG2P55039 364 aaKnown RBP13□□□□□ -0.33
GFAP-228ENST00000638488 UBE2SQ16763 222 aa13□□□□□ -0.33
GFAP-228ENST00000638488 AOC3Q16853 763 aa13□□□□□ -0.33
GFAP-228ENST00000638488 LRRC57Q8N9N7 239 aa13□□□□□ -0.33
GFAP-228ENST00000638488 CENPKQ9BS16 269 aa13□□□□□ -0.33
GFAP-228ENST00000638488 CUEDC2Q9H467 287 aa13□□□□□ -0.33
GFAP-228ENST00000638488 NLRC4Q9NPP4 1024 aa13□□□□□ -0.33
GFAP-228ENST00000638488 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13□□□□□ -0.33
GFAP-228ENST00000638488 TTC7AQ9ULT0 858 aaPredicted RBP13□□□□□ -0.33
GFAP-228ENST00000638488 SUGT1Q9Y2Z0 365 aa13□□□□□ -0.33
GFAP-228ENST00000638488 FAM187AA6NFU0 413 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 PFDN1O60925 122 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 KLRC3Q07444 240 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 MGAT5Q09328 741 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 DUPD1Q68J44 220 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 CABP7Q86V35 215 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 ECHDC2Q86YB7 292 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 CCNJLQ8IV13 435 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 METTL13Q8N6R0 699 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 OLFM3Q96PB7 478 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 ROPN1BQ9BZX4 212 aaPredicted RBP12.99□□□□□ -0.33
GFAP-228ENST00000638488 PHACTR1Q9C0D0 580 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 TLE6Q9H808 572 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 ROPN1Q9HAT0 212 aaPredicted RBP12.99□□□□□ -0.33
GFAP-228ENST00000638488 COL11A2P13942 1736 aaPredicted RBP12.99□□□□□ -0.33
GFAP-228ENST00000638488 RBM47A0AV96 593 aaKnown RBP12.99□□□□□ -0.33
GFAP-228ENST00000638488 PLCG1P19174 1290 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 TNNI2P48788 182 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 BPIFB4P59827 614 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 USP46P62068 366 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 AUHQ13825 339 aaKnown RBP12.99□□□□□ -0.33
GFAP-228ENST00000638488 MTFR1Q15390 333 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 ADGRF4Q8IZF3 695 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 LRRC15Q8TF66 581 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 EEF2KMTQ96G04 330 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 HIC2Q96JB3 615 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 YIPF2Q9BWQ6 316 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 RIOX1Q9H6W3 641 aa12.99□□□□□ -0.33
GFAP-228ENST00000638488 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
GFAP-228ENST00000638488 POTEIP0CG38 1075 aa12.98□□□□□ -0.33
GFAP-228ENST00000638488 POTEJP0CG39 1038 aa12.98□□□□□ -0.33
GFAP-228ENST00000638488 ADCY7P51828 1080 aa12.98□□□□□ -0.33
GFAP-228ENST00000638488 YARSP54577 528 aaKnown RBP12.98□□□□□ -0.33
GFAP-228ENST00000638488 SULT2A1Q06520 285 aa12.98□□□□□ -0.33
GFAP-228ENST00000638488 MPP3Q13368 585 aa12.98□□□□□ -0.33
GFAP-228ENST00000638488 CCDC6Q16204 474 aa12.98□□□□□ -0.33
GFAP-228ENST00000638488 ASPRV1Q53RT3 343 aa12.98□□□□□ -0.33
GFAP-228ENST00000638488 SNX30Q5VWJ9 437 aa12.98□□□□□ -0.33
GFAP-228ENST00000638488 POTEEQ6S8J3 1075 aa12.98□□□□□ -0.33
GFAP-228ENST00000638488 PODNQ7Z5L7 613 aa12.98□□□□□ -0.33
GFAP-228ENST00000638488 ZC3H18Q86VM9 953 aaKnown RBP12.98□□□□□ -0.33
GFAP-228ENST00000638488 VSIG1Q86XK7 387 aa12.98□□□□□ -0.33
GFAP-228ENST00000638488 FLAD1Q8NFF5 587 aa12.98□□□□□ -0.33
GFAP-228ENST00000638488 TBC1D10AQ9BXI6 508 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms