RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 PPP4R3CPQ6ZMV5 832 aa18.53■□□□□ 0.56
CACNA1A-259ENST00000638114 HACE1Q8IYU2 909 aa18.53■□□□□ 0.56
CACNA1A-259ENST00000638114 IGSF21Q96ID5 467 aa18.53■□□□□ 0.56
CACNA1A-259ENST00000638114 IFT74Q96LB3 600 aa18.53■□□□□ 0.56
CACNA1A-259ENST00000638114 RNF39Q9H2S5 420 aa18.53■□□□□ 0.56
CACNA1A-259ENST00000638114 NXF3Q9H4D5 531 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-259ENST00000638114 POLD4Q9HCU8 107 aa18.53■□□□□ 0.56
CACNA1A-259ENST00000638114 CLEC1BQ9P126 229 aa18.53■□□□□ 0.56
CACNA1A-259ENST00000638114 VWA3AA6NCI4 1184 aa18.52■□□□□ 0.56
CACNA1A-259ENST00000638114 B4GALT3O60512 393 aa18.52■□□□□ 0.56
CACNA1A-259ENST00000638114 DDHD2O94830 711 aa18.52■□□□□ 0.56
CACNA1A-259ENST00000638114 EYA4O95677 639 aa18.52■□□□□ 0.56
CACNA1A-259ENST00000638114 MLH1P40692 756 aa18.52■□□□□ 0.56
CACNA1A-259ENST00000638114 RBM10P98175 930 aaKnown RBP18.52■□□□□ 0.56
CACNA1A-259ENST00000638114 BMS1Q14692 1282 aaKnown RBP18.52■□□□□ 0.56
CACNA1A-259ENST00000638114 GJD3Q8N144 294 aa18.52■□□□□ 0.56
CACNA1A-259ENST00000638114 VPS52Q8N1B4 723 aa18.52■□□□□ 0.56
CACNA1A-259ENST00000638114 BCL7CQ8WUZ0 217 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-259ENST00000638114 KIFAP3Q92845 792 aa18.52■□□□□ 0.56
CACNA1A-259ENST00000638114 MSLNLQ96KJ4 702 aa18.52■□□□□ 0.56
CACNA1A-259ENST00000638114 PRIMPOLQ96LW4 560 aa18.52■□□□□ 0.56
CACNA1A-259ENST00000638114 GAD1Q99259 594 aa18.52■□□□□ 0.56
CACNA1A-259ENST00000638114 MMTAG2Q9BU76 263 aaKnown RBP18.52■□□□□ 0.56
CACNA1A-259ENST00000638114 CD320Q9NPF0 282 aa18.52■□□□□ 0.56
CACNA1A-259ENST00000638114 A0A1B0GUA9 196 aa18.51■□□□□ 0.55
CACNA1A-259ENST00000638114 VPS37CA5D8V6 355 aaPredicted RBP18.51■□□□□ 0.55
CACNA1A-259ENST00000638114 ARL5CA6NH57 179 aa18.51■□□□□ 0.55
CACNA1A-259ENST00000638114 PRKCBP05771 671 aa18.51■□□□□ 0.55
CACNA1A-259ENST00000638114 SRGAP2BP0DMP2 458 aa18.51■□□□□ 0.55
CACNA1A-259ENST00000638114 SMAD2Q15796 467 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-259ENST00000638114 MAPK6Q16659 721 aa18.51■□□□□ 0.55
CACNA1A-259ENST00000638114 FAM187BQ17R55 369 aa18.51■□□□□ 0.55
CACNA1A-259ENST00000638114 LLGL2Q6P1M3 1020 aa18.51■□□□□ 0.55
CACNA1A-259ENST00000638114 VN1R2Q8NFZ6 395 aa18.51■□□□□ 0.55
CACNA1A-259ENST00000638114 KIFC3Q9BVG8 833 aa18.51■□□□□ 0.55
CACNA1A-259ENST00000638114 FZD8Q9H461 694 aa18.51■□□□□ 0.55
CACNA1A-259ENST00000638114 GIT1Q9Y2X7 761 aa18.51■□□□□ 0.55
CACNA1A-259ENST00000638114 C2orf71A6NGG8 1288 aa18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 CXCL14O95715 111 aa18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 AKAP5P24588 427 aa18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 SCNN1GP51170 649 aa18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 COASYQ13057 564 aa18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 PRPF4BQ13523 1007 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 ARL6IP4Q66PJ3 421 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 KCNK18Q7Z418 384 aa18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 BRAPQ7Z569 592 aa18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 DDX53Q86TM3 631 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 MRPL43Q8N983 215 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 SMRP1Q8NCR6 262 aa18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 ZFP42Q96MM3 310 aa18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 TMEM175Q9BSA9 504 aa18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 CCDC113Q9H0I3 377 aa18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 ZBP1Q9H171 429 aa18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 PRKAG3Q9UGI9 489 aa18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 PARP2Q9UGN5 583 aa18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 FAN1Q9Y2M0 1017 aa18.5■□□□□ 0.55
CACNA1A-259ENST00000638114 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 TTLL13PA6NNM8 815 aa18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 N4BP3O15049 544 aa18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 INPPL1O15357 1258 aa18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 ALDH2P05091 517 aa18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 SSBP05455 408 aaKnown RBP eCLIP18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 PDCP20941 246 aa18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 OR1G1P47890 313 aa18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 ZP2Q05996 745 aa18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 ADHFE1Q8IWW8 467 aa18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 TMEM87AQ8NBN3 555 aa18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 AUTS2Q8WXX7 1259 aa18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 CDK5RAP3Q96JB5 506 aa18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 PLIN2Q99541 437 aa18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 RUSC1Q9BVN2 902 aa18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 PDZD7Q9H5P4 517 aa18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 USP20Q9Y2K6 914 aa18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 PRG3Q9Y2Y8 225 aaPredicted RBP18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 TDRD15B5MCY1 1934 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-259ENST00000638114 ACKR2O00590 384 aa18.48■□□□□ 0.55
CACNA1A-259ENST00000638114 NRP1O14786 923 aa18.48■□□□□ 0.55
CACNA1A-259ENST00000638114 HIP1RO75146 1068 aa18.48■□□□□ 0.55
CACNA1A-259ENST00000638114 CTSAP10619 480 aa18.48■□□□□ 0.55
CACNA1A-259ENST00000638114 EFNA5P52803 228 aa18.48■□□□□ 0.55
CACNA1A-259ENST00000638114 PEX3P56589 373 aa18.48■□□□□ 0.55
CACNA1A-259ENST00000638114 HYIQ5T013 277 aa18.48■□□□□ 0.55
CACNA1A-259ENST00000638114 RINT1Q6NUQ1 792 aa18.48■□□□□ 0.55
CACNA1A-259ENST00000638114 COLGALT2Q8IYK4 626 aa18.48■□□□□ 0.55
CACNA1A-259ENST00000638114 KHSRPQ92945 711 aaKnown RBP eCLIP18.48■□□□□ 0.55
CACNA1A-259ENST00000638114 PNMA5Q96PV4 448 aa18.48■□□□□ 0.55
CACNA1A-259ENST00000638114 RPS6KC1Q96S38 1066 aa18.48■□□□□ 0.55
CACNA1A-259ENST00000638114 ADPGKQ9BRR6 497 aa18.48■□□□□ 0.55
CACNA1A-259ENST00000638114 VN1R3Q9BXE9 311 aa18.48■□□□□ 0.55
CACNA1A-259ENST00000638114 NT5C3AQ9H0P0 336 aa18.48■□□□□ 0.55
CACNA1A-259ENST00000638114 MIOSQ9NXC5 875 aa18.48■□□□□ 0.55
CACNA1A-259ENST00000638114 KLK14Q9P0G3 267 aa18.48■□□□□ 0.55
CACNA1A-259ENST00000638114 USP15Q9Y4E8 981 aaPredicted RBP18.48■□□□□ 0.55
CACNA1A-259ENST00000638114 CCDC169A6NNP5 214 aa18.47■□□□□ 0.55
CACNA1A-259ENST00000638114 CLASP2O75122 1294 aaKnown RBP18.47■□□□□ 0.55
CACNA1A-259ENST00000638114 BMP15O95972 392 aa18.47■□□□□ 0.55
CACNA1A-259ENST00000638114 EDN1P05305 212 aa18.47■□□□□ 0.55
CACNA1A-259ENST00000638114 DMP1Q13316 513 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-259ENST00000638114 KCNC3Q14003 757 aa18.47■□□□□ 0.55
CACNA1A-259ENST00000638114 ANKRD54Q6NXT1 300 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms