RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 GALTP07902 379 aa15.25■□□□□ 0.03
PNKP-228ENST00000637325 DLX2Q07687 328 aaPredicted RBP15.25■□□□□ 0.03
PNKP-228ENST00000637325 PRPF4BQ13523 1007 aaKnown RBP15.25■□□□□ 0.03
PNKP-228ENST00000637325 SMC1AQ14683 1233 aaKnown RBP15.25■□□□□ 0.03
PNKP-228ENST00000637325 CDCA2Q69YH5 1023 aaPredicted RBP15.25■□□□□ 0.03
PNKP-228ENST00000637325 PPP4R3CPQ6ZMV5 832 aa15.25■□□□□ 0.03
PNKP-228ENST00000637325 CDR2LQ86X02 465 aaPredicted RBP15.25■□□□□ 0.03
PNKP-228ENST00000637325 GAD1Q99259 594 aa15.25■□□□□ 0.03
PNKP-228ENST00000637325 MMTAG2Q9BU76 263 aaKnown RBP15.25■□□□□ 0.03
PNKP-228ENST00000637325 NT5C3AQ9H0P0 336 aa15.25■□□□□ 0.03
PNKP-228ENST00000637325 FZD8Q9H461 694 aa15.25■□□□□ 0.03
PNKP-228ENST00000637325 CD207Q9UJ71 328 aa15.25■□□□□ 0.03
PNKP-228ENST00000637325 HES2Q9Y543 173 aa15.25■□□□□ 0.03
PNKP-228ENST00000637325 CITO14578 2027 aa15.25■□□□□ 0.03
PNKP-228ENST00000637325 A0A1B0GUA9 196 aa15.24■□□□□ 0.03
PNKP-228ENST00000637325 CCDC169A6NNP5 214 aa15.24■□□□□ 0.03
PNKP-228ENST00000637325 N4BP3O15049 544 aa15.24■□□□□ 0.03
PNKP-228ENST00000637325 TBX10O75333 385 aa15.24■□□□□ 0.03
PNKP-228ENST00000637325 SSBP05455 408 aaKnown RBP eCLIP15.24■□□□□ 0.03
PNKP-228ENST00000637325 SRGAP2BP0DMP2 458 aa15.24■□□□□ 0.03
PNKP-228ENST00000637325 SLC11A1P49279 550 aa15.24■□□□□ 0.03
PNKP-228ENST00000637325 DUSP6Q16828 381 aa15.24■□□□□ 0.03
PNKP-228ENST00000637325 FAM187BQ17R55 369 aa15.24■□□□□ 0.03
PNKP-228ENST00000637325 ZNF280BQ86YH2 543 aa15.24■□□□□ 0.03
PNKP-228ENST00000637325 IGSF21Q96ID5 467 aa15.24■□□□□ 0.03
PNKP-228ENST00000637325 PLIN2Q99541 437 aa15.24■□□□□ 0.03
PNKP-228ENST00000637325 TMEM175Q9BSA9 504 aa15.24■□□□□ 0.03
PNKP-228ENST00000637325 RNF39Q9H2S5 420 aa15.24■□□□□ 0.03
PNKP-228ENST00000637325 NXF3Q9H4D5 531 aaKnown RBP15.24■□□□□ 0.03
PNKP-228ENST00000637325 FOXD4L1Q9NU39 408 aa15.24■□□□□ 0.03
PNKP-228ENST00000637325 DNAJB4Q9UDY4 337 aa15.24■□□□□ 0.03
PNKP-228ENST00000637325 PARP2Q9UGN5 583 aa15.24■□□□□ 0.03
PNKP-228ENST00000637325 FAN1Q9Y2M0 1017 aa15.24■□□□□ 0.03
PNKP-228ENST00000637325 GIT1Q9Y2X7 761 aa15.24■□□□□ 0.03
PNKP-228ENST00000637325 ARL5CA6NH57 179 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 K7ELQ4 463 aaPredicted RBP15.23■□□□□ 0.03
PNKP-228ENST00000637325 ACKR2O00590 384 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 DDHD2O94830 711 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 CXCL14O95715 111 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 AKAP5P24588 427 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 SSTR3P32745 418 aaPredicted RBP15.23■□□□□ 0.03
PNKP-228ENST00000637325 MLH1P40692 756 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 UBA7P41226 1012 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 AFF1P51825 1210 aaKnown RBP15.23■□□□□ 0.03
PNKP-228ENST00000637325 EFNA5P52803 228 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 SMAD4Q13485 552 aaKnown RBP15.23■□□□□ 0.03
PNKP-228ENST00000637325 RINT1Q6NUQ1 792 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 DDX53Q86TM3 631 aaKnown RBP15.23■□□□□ 0.03
PNKP-228ENST00000637325 CABP7Q86V35 215 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 FAM178BQ8IXR5 827 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 VPS52Q8N1B4 723 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 KCTD17Q8N5Z5 321 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 RASSF8Q8NHQ8 419 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 CALML4Q96GE6 196 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 INTS4Q96HW7 963 aaKnown RBP15.23■□□□□ 0.03
PNKP-228ENST00000637325 AK8Q96MA6 479 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 DRC1Q96MC2 740 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 ADPGKQ9BRR6 497 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 KIFC3Q9BVG8 833 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 MYH15Q9Y2K3 1946 aa15.23■□□□□ 0.03
PNKP-228ENST00000637325 HIDE1A8MVS5 230 aa15.22■□□□□ 0.03
PNKP-228ENST00000637325 K7ERI5 159 aa15.22■□□□□ 0.03
PNKP-228ENST00000637325 MBTPS2O43462 519 aa15.22■□□□□ 0.03
PNKP-228ENST00000637325 HIP1RO75146 1068 aa15.22■□□□□ 0.03
PNKP-228ENST00000637325 NR1I2O75469 434 aa15.22■□□□□ 0.03
PNKP-228ENST00000637325 SYT1P21579 422 aa15.22■□□□□ 0.03
PNKP-228ENST00000637325 OR1G1P47890 313 aa15.22■□□□□ 0.03
PNKP-228ENST00000637325 PEX3P56589 373 aa15.22■□□□□ 0.03
PNKP-228ENST00000637325 DMP1Q13316 513 aaPredicted RBP15.22■□□□□ 0.03
PNKP-228ENST00000637325 SF3A1Q15459 793 aaKnown RBP15.22■□□□□ 0.03
PNKP-228ENST00000637325 HYIQ5T013 277 aa15.22■□□□□ 0.03
PNKP-228ENST00000637325 LLGL2Q6P1M3 1020 aa15.22■□□□□ 0.03
PNKP-228ENST00000637325 KCNK18Q7Z418 384 aa15.22■□□□□ 0.03
PNKP-228ENST00000637325 APBB1IPQ7Z5R6 666 aaPredicted RBP15.22■□□□□ 0.03
PNKP-228ENST00000637325 TMEM173Q86WV6 379 aaPredicted RBP15.22■□□□□ 0.03
PNKP-228ENST00000637325 MRPL43Q8N983 215 aaKnown RBP15.22■□□□□ 0.03
PNKP-228ENST00000637325 PNMA5Q96PV4 448 aa15.22■□□□□ 0.03
PNKP-228ENST00000637325 RPS6KC1Q96S38 1066 aa15.22■□□□□ 0.03
PNKP-228ENST00000637325 RUSC1Q9BVN2 902 aa15.22■□□□□ 0.03
PNKP-228ENST00000637325 TIPINQ9BVW5 301 aa15.22■□□□□ 0.03
PNKP-228ENST00000637325 KLK14Q9P0G3 267 aa15.22■□□□□ 0.03
PNKP-228ENST00000637325 STK39Q9UEW8 545 aa15.22■□□□□ 0.03
PNKP-228ENST00000637325 BARX2Q9UMQ3 279 aaPredicted RBP15.22■□□□□ 0.03
PNKP-228ENST00000637325 C2orf71A6NGG8 1288 aa15.21■□□□□ 0.03
PNKP-228ENST00000637325 NRP1O14786 923 aa15.21■□□□□ 0.03
PNKP-228ENST00000637325 SLC26A4O43511 780 aa15.21■□□□□ 0.03
PNKP-228ENST00000637325 PLA2G4BP0C869 781 aa15.21■□□□□ 0.03
PNKP-228ENST00000637325 SCNN1GP51170 649 aa15.21■□□□□ 0.03
PNKP-228ENST00000637325 GIT2Q14161 759 aa15.21■□□□□ 0.03
PNKP-228ENST00000637325 C1orf186Q6ZWK4 172 aa15.21■□□□□ 0.03
PNKP-228ENST00000637325 GJD3Q8N144 294 aa15.21■□□□□ 0.03
PNKP-228ENST00000637325 MSLNLQ96KJ4 702 aa15.21■□□□□ 0.03
PNKP-228ENST00000637325 ZFP42Q96MM3 310 aa15.21■□□□□ 0.03
PNKP-228ENST00000637325 CCDC113Q9H0I3 377 aa15.21■□□□□ 0.03
PNKP-228ENST00000637325 PDZD7Q9H5P4 517 aa15.21■□□□□ 0.03
PNKP-228ENST00000637325 KMT5AQ9NQR1 393 aa15.21■□□□□ 0.03
PNKP-228ENST00000637325 MIOSQ9NXC5 875 aa15.21■□□□□ 0.03
PNKP-228ENST00000637325 CLEC1BQ9P126 229 aa15.21■□□□□ 0.03
PNKP-228ENST00000637325 USP20Q9Y2K6 914 aa15.21■□□□□ 0.03
PNKP-228ENST00000637325 PRG3Q9Y2Y8 225 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms