RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 NOMO2Q5JPE7 1267 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 Q7L0L9 218 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 ZNF598Q86UK7 904 aaKnown RBP9.03□□□□□ -0.96
PNKP-226ENST00000636840 CRIPAKQ8N1N5 446 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 TMEM161BQ8NDZ6 487 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 HELQQ8TDG4 1101 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 MRPS27Q92552 414 aaKnown RBP9.03□□□□□ -0.96
PNKP-226ENST00000636840 CDX2Q99626 313 aaPredicted RBP9.03□□□□□ -0.96
PNKP-226ENST00000636840 C11orf84Q9BUA3 381 aaPredicted RBP9.03□□□□□ -0.96
PNKP-226ENST00000636840 TTYH1Q9H313 450 aaPredicted RBP9.03□□□□□ -0.96
PNKP-226ENST00000636840 PRDM12Q9H4Q4 367 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 MRPL44Q9H9J2 332 aaKnown RBP9.03□□□□□ -0.96
PNKP-226ENST00000636840 CERS4Q9HA82 394 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 RSAD1Q9HA92 442 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 PANK4Q9NVE7 773 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 KBTBD4Q9NVX7 518 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 LMCD1Q9NZU5 365 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 ARHGAP28Q9P2N2 729 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 PUF60Q9UHX1 559 aaKnown RBP9.03□□□□□ -0.96
PNKP-226ENST00000636840 EXOC7Q9UPT5 735 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 TNFSF13BQ9Y275 285 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 GIT1Q9Y2X7 761 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 LCHNA4D1U4 455 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 K7ENM7 598 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 CLDN3O15551 220 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 B4GALT5O43286 388 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 ALDH2P05091 517 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 MYL1P05976 194 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 FGFR1P11362 822 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 FOSL2P15408 326 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 LAG3P18627 525 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 PPM1AP35813 382 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 LIG4P49917 911 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 YARSP54577 528 aaKnown RBP9.02□□□□□ -0.97
PNKP-226ENST00000636840 ASIC1P78348 528 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 KRT17Q04695 432 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 GPM6BQ13491 265 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 ALCAMQ13740 583 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 GRIN2CQ14957 1233 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 POSTNQ15063 836 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 LONRF3Q496Y0 759 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 EPC2Q52LR7 807 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 UBXN11Q5T124 520 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 SLFN12LQ6IEE8 588 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 ZPBP2Q6X784 338 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 LRRC43Q8N309 656 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 FSIP1Q8NA03 581 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 CLP1Q92989 425 aaKnown RBP9.02□□□□□ -0.97
PNKP-226ENST00000636840 P2RX5Q93086 422 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 HVCN1Q96D96 273 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 IPO9Q96P70 1041 aaKnown RBP9.02□□□□□ -0.97
PNKP-226ENST00000636840 CASD1Q96PB1 797 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 RPS6KC1Q96S38 1066 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 ACO2Q99798 780 aaKnown RBP9.02□□□□□ -0.97
PNKP-226ENST00000636840 C7orf25Q9BPX7 421 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 KIFC3Q9BVG8 833 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 CCDC94Q9BW85 323 aaPredicted RBP9.02□□□□□ -0.97
PNKP-226ENST00000636840 APOL6Q9BWW8 343 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 CCDC113Q9H0I3 377 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 ST6GALNAC4Q9H4F1 302 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 TOPORSQ9NS56 1045 aaPredicted RBP9.02□□□□□ -0.97
PNKP-226ENST00000636840 TYW1Q9NV66 732 aaKnown RBP9.02□□□□□ -0.97
PNKP-226ENST00000636840 SERTAD1Q9UHV2 236 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 HOOK1Q9UJC3 728 aaKnown RBP9.02□□□□□ -0.97
PNKP-226ENST00000636840 MTUS1Q9ULD2 1270 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 INPP5FQ9Y2H2 1132 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 IPPQ9Y573 584 aa9.02□□□□□ -0.97
PNKP-226ENST00000636840 ARID2Q68CP9 1835 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 A0A087X0B3 334 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 PVALEFA0A1B0GWK0 134 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 H3BNC9 293 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 LPXNO60711 386 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 OFD1O75665 1012 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 TOM1L1O75674 476 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 MCF2P10911 925 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 PFKFB1P16118 471 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 AFMP43652 599 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 GTF2BQ00403 316 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 E2F4Q16254 413 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 ZNF568Q3ZCX4 644 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 NT5DC1Q5TFE4 455 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 MPZL3Q6UWV2 235 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 ZNF720Q7Z2F6 126 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 CDR2LQ86X02 465 aaPredicted RBP9.01□□□□□ -0.97
PNKP-226ENST00000636840 THNSL1Q8IYQ7 743 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 SYCP3Q8IZU3 236 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 MYLIPQ8WY64 445 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 STAMQ92783 540 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 KCNN1Q92952 543 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 LPPQ93052 612 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 PPP2R3CQ969Q6 453 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 DNAJC19Q96DA6 116 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 ZNF558Q96NG5 402 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 ACAP3Q96P50 834 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 ACCSQ96QU6 501 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 C17orf80Q9BSJ5 609 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 TARS2Q9BW92 718 aaKnown RBP9.01□□□□□ -0.97
PNKP-226ENST00000636840 EIF2AQ9BY44 585 aaKnown RBP9.01□□□□□ -0.97
PNKP-226ENST00000636840 TRIM9Q9C026 710 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 LMAN2LQ9H0V9 348 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms