RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 NDUFS3O75489 264 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 EPB42P16452 691 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 C4BPBP20851 252 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 RGS4P49798 205 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 SNAP25P60880 206 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 ROR1Q01973 937 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 ZNF544Q6NX49 715 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 SAYSD1Q9NPB0 183 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 TBC1D22BQ9NU19 505 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 ZBTB40Q9NUA8 1239 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 RNF181Q9P0P0 153 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 MOCS2O96007 188 aaPredicted RBP5.87□□□□□ -1.47
SCN1A-209ENST00000635750 JAK1P23458 1154 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 LRRC63Q05C16 580 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 USP39Q53GS9 565 aaKnown RBP5.87□□□□□ -1.47
SCN1A-209ENST00000635750 IER5Q5VY09 327 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 CEP70Q8NHQ1 597 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 FAM161BQ96MY7 647 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 RPAP3Q9H6T3 665 aaPredicted RBP5.87□□□□□ -1.47
SCN1A-209ENST00000635750 GALNT8Q9NY28 637 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 ZC3H7BQ9UGR2 993 aaKnown RBP5.87□□□□□ -1.47
SCN1A-209ENST00000635750 IP6K2Q9UHH9 426 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 TBX22Q9Y458 520 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 MEFVO15553 781 aaPredicted RBP5.87□□□□□ -1.47
SCN1A-209ENST00000635750 SFNP31947 248 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 DHX9Q08211 1270 aaKnown RBP5.87□□□□□ -1.47
SCN1A-209ENST00000635750 CATSPER1Q8NEC5 780 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 NEK9Q8TD19 979 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 KIF12Q96FN5 646 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 OSBPL6Q9BZF3 934 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.87□□□□□ -1.47
SCN1A-209ENST00000635750 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.87□□□□□ -1.47
SCN1A-209ENST00000635750 ZNF229Q9UJW7 825 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 NDUFB9Q9Y6M9 179 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 POLR3AO14802 1390 aaPredicted RBP5.87□□□□□ -1.47
SCN1A-209ENST00000635750 POTEFA5A3E0 1075 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 M0QYV0 167 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 ANGPT2O15123 496 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 PPP6R2O75170 966 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 UPP2O95045 317 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 UBE3AQ05086 875 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 TBL3Q12788 808 aaKnown RBP5.87□□□□□ -1.47
SCN1A-209ENST00000635750 LAMC2Q13753 1193 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 INPP5AQ14642 412 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 UBE3CQ15386 1083 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 C11orf96Q7Z7L8 435 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 CDKL3Q8IVW4 592 aaPredicted RBP5.87□□□□□ -1.47
SCN1A-209ENST00000635750 NSUN6Q8TEA1 469 aaKnown RBP5.87□□□□□ -1.47
SCN1A-209ENST00000635750 OSCP1Q8WVF1 389 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 TM6SF1Q9BZW5 370 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 CTIFO43310 598 aaKnown RBP5.87□□□□□ -1.47
SCN1A-209ENST00000635750 FGAP02671 866 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 GTF2E2P29084 291 aaKnown RBP5.87□□□□□ -1.47
SCN1A-209ENST00000635750 SOAT1P35610 550 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 NT5C2P49902 561 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 POLE2P56282 527 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 GSTA3Q16772 222 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 IL31Q6EBC2 164 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 ANO5Q75V66 913 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 PLD3Q8IV08 490 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 TSPYL6Q8N831 410 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 HIPK4Q8NE63 616 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 PITPNM3Q9BZ71 974 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 ARHGEF3Q9NR81 526 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 BFARQ9NZS9 450 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 UVRAGQ9P2Y5 699 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 MLH3Q9UHC1 1453 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 HMGXB3Q12766 1538 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 A0A0G2JND7 137 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 APOL1O14791 398 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 DAB1O75553 588 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 HARS2P49590 506 aaKnown RBP5.87□□□□□ -1.47
SCN1A-209ENST00000635750 TPI1P60174 286 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 RUNX1T1Q06455 604 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 C1orf146Q5VVC0 180 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 TRIM72Q6ZMU5 477 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 RGS9BPQ6ZS82 235 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 HORMAD1Q86X24 394 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 VPS37AQ8NEZ2 397 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 MYRIPQ8NFW9 859 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 TDRD7Q8NHU6 1098 aaKnown RBP5.87□□□□□ -1.47
SCN1A-209ENST00000635750 USP13Q92995 863 aaPredicted RBP5.87□□□□□ -1.47
SCN1A-209ENST00000635750 LSG1Q9H089 658 aaKnown RBP5.87□□□□□ -1.47
SCN1A-209ENST00000635750 PKD2L2Q9NZM6 624 aa5.87□□□□□ -1.47
SCN1A-209ENST00000635750 FRMD3A2A2Y4 597 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 A8MXQ7 604 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 PDE8BO95263 885 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 ACSL3O95573 720 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 SLCO1A2P46721 670 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 SHROOM1Q2M3G4 852 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 RARS2Q5T160 578 aaKnown RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 SNRNP48Q6IEG0 339 aaKnown RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 LUZP2Q86TE4 346 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 RPAINQ86UA6 219 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 CLYBLQ8N0X4 340 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 CENPTQ96BT3 561 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 C19orf60Q96EN9 201 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 SAAL1Q96ER3 474 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 ZNF512Q96ME7 567 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 DDX28Q9NUL7 540 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms