RNA–Protein interactions for RNA: ENST00000623985.3

LINC00643-206, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 864 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-206ENST00000623985 CD207Q9UJ71 328 aa16.38■□□□□ 0.21
LINC00643-206ENST00000623985 DNM3Q9UQ16 869 aa16.38■□□□□ 0.21
LINC00643-206ENST00000623985 TRIOO75962 3097 aa16.38■□□□□ 0.21
LINC00643-206ENST00000623985 A0A1B0GUA9 196 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 VWA3AA6NCI4 1184 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 NT5C1B-RDH14C9J2C7 533 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 MBTPS2O43462 519 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 BMP15O95972 392 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 GALTP07902 379 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 SRGAP2BP0DMP2 458 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 MLH1P40692 756 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 MAPK6Q16659 721 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 HYIQ5T013 277 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 TMC7Q7Z402 723 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 TMEM173Q86WV6 379 aaPredicted RBP16.37■□□□□ 0.21
LINC00643-206ENST00000623985 KCTD17Q8N5Z5 321 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 DEPTORQ8TB45 409 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 IGSF21Q96ID5 467 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 FAM193BQ96PV7 902 aaPredicted RBP16.37■□□□□ 0.21
LINC00643-206ENST00000623985 TMEM175Q9BSA9 504 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 CCDC113Q9H0I3 377 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 GBP3Q9H0R5 595 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 ZBP1Q9H171 429 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 NXF3Q9H4D5 531 aaKnown RBP16.37■□□□□ 0.21
LINC00643-206ENST00000623985 DNAJB4Q9UDY4 337 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 DAXXQ9UER7 740 aaPredicted RBP16.37■□□□□ 0.21
LINC00643-206ENST00000623985 STK39Q9UEW8 545 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 PRKAG3Q9UGI9 489 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 GIT1Q9Y2X7 761 aa16.37■□□□□ 0.21
LINC00643-206ENST00000623985 VPS37CA5D8V6 355 aaPredicted RBP16.36■□□□□ 0.21
LINC00643-206ENST00000623985 E9PMD0 336 aa16.36■□□□□ 0.21
LINC00643-206ENST00000623985 N4BP3O15049 544 aa16.36■□□□□ 0.21
LINC00643-206ENST00000623985 PER2O15055 1255 aa16.36■□□□□ 0.21
LINC00643-206ENST00000623985 B4GALT3O60512 393 aa16.36■□□□□ 0.21
LINC00643-206ENST00000623985 NPTXRO95502 500 aa16.36■□□□□ 0.21
LINC00643-206ENST00000623985 PRKCBP05771 671 aa16.36■□□□□ 0.21
LINC00643-206ENST00000623985 CDC25AP30304 524 aa16.36■□□□□ 0.21
LINC00643-206ENST00000623985 SLC11A1P49279 550 aa16.36■□□□□ 0.21
LINC00643-206ENST00000623985 AFF1P51825 1210 aaKnown RBP16.36■□□□□ 0.21
LINC00643-206ENST00000623985 COASYQ13057 564 aa16.36■□□□□ 0.21
LINC00643-206ENST00000623985 BMS1Q14692 1282 aaKnown RBP16.36■□□□□ 0.21
LINC00643-206ENST00000623985 SMAD2Q15796 467 aaKnown RBP16.36■□□□□ 0.21
LINC00643-206ENST00000623985 CLUL1Q15846 466 aa16.36■□□□□ 0.21
LINC00643-206ENST00000623985 DDX53Q86TM3 631 aaKnown RBP16.36■□□□□ 0.21
LINC00643-206ENST00000623985 ZNF280BQ86YH2 543 aa16.36■□□□□ 0.21
LINC00643-206ENST00000623985 SMRP1Q8NCR6 262 aa16.36■□□□□ 0.21
LINC00643-206ENST00000623985 INTS4Q96HW7 963 aaKnown RBP16.36■□□□□ 0.21
LINC00643-206ENST00000623985 CLEC1BQ9P126 229 aa16.36■□□□□ 0.21
LINC00643-206ENST00000623985 BARX2Q9UMQ3 279 aaPredicted RBP16.36■□□□□ 0.21
LINC00643-206ENST00000623985 HES2Q9Y543 173 aa16.36■□□□□ 0.21
LINC00643-206ENST00000623985 PHLPP2Q6ZVD8 1323 aa16.36■□□□□ 0.21
LINC00643-206ENST00000623985 ARL5CA6NH57 179 aa16.35■□□□□ 0.21
LINC00643-206ENST00000623985 HIDE1A8MVS5 230 aa16.35■□□□□ 0.21
LINC00643-206ENST00000623985 ACKR2O00590 384 aa16.35■□□□□ 0.21
LINC00643-206ENST00000623985 DDHD2O94830 711 aa16.35■□□□□ 0.21
LINC00643-206ENST00000623985 POMCP01189 267 aa16.35■□□□□ 0.21
LINC00643-206ENST00000623985 EFNA5P52803 228 aa16.35■□□□□ 0.21
LINC00643-206ENST00000623985 PRPF4BQ13523 1007 aaKnown RBP16.35■□□□□ 0.21
LINC00643-206ENST00000623985 KCNC3Q14003 757 aa16.35■□□□□ 0.21
LINC00643-206ENST00000623985 KCNK18Q7Z418 384 aa16.35■□□□□ 0.21
LINC00643-206ENST00000623985 CDR2LQ86X02 465 aaPredicted RBP16.35■□□□□ 0.21
LINC00643-206ENST00000623985 VPS52Q8N1B4 723 aa16.35■□□□□ 0.21
LINC00643-206ENST00000623985 BCL7CQ8WUZ0 217 aaPredicted RBP16.35■□□□□ 0.21
LINC00643-206ENST00000623985 AK8Q96MA6 479 aa16.35■□□□□ 0.21
LINC00643-206ENST00000623985 DRC1Q96MC2 740 aa16.35■□□□□ 0.21
LINC00643-206ENST00000623985 GAD1Q99259 594 aa16.35■□□□□ 0.21
LINC00643-206ENST00000623985 ADPGKQ9BRR6 497 aa16.35■□□□□ 0.21
LINC00643-206ENST00000623985 TIPINQ9BVW5 301 aa16.35■□□□□ 0.21
LINC00643-206ENST00000623985 APOL6Q9BWW8 343 aa16.35■□□□□ 0.21
LINC00643-206ENST00000623985 RNF39Q9H2S5 420 aa16.35■□□□□ 0.21
LINC00643-206ENST00000623985 PDZD7Q9H5P4 517 aa16.35■□□□□ 0.21
LINC00643-206ENST00000623985 C2orf71A6NGG8 1288 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 K7ELQ4 463 aaPredicted RBP16.34■□□□□ 0.21
LINC00643-206ENST00000623985 SLC26A4O43511 780 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 HIP1RO75146 1068 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 CTSAP10619 480 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 SCNN1GP51170 649 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 ZP2Q05996 745 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 DSC1Q08554 894 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 DMP1Q13316 513 aaPredicted RBP16.34■□□□□ 0.21
LINC00643-206ENST00000623985 GIT2Q14161 759 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 TMEM132AQ24JP5 1023 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 RINT1Q6NUQ1 792 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 TMEM184AQ6ZMB5 413 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 ADHFE1Q8IWW8 467 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 COLGALT2Q8IYK4 626 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 MRPL43Q8N983 215 aaKnown RBP16.34■□□□□ 0.21
LINC00643-206ENST00000623985 VN1R2Q8NFZ6 395 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 CDK5RAP3Q96JB5 506 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 POP1Q99575 1024 aaKnown RBP16.34■□□□□ 0.21
LINC00643-206ENST00000623985 KIFC3Q9BVG8 833 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 RUSC1Q9BVN2 902 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 C17orf75Q9HAS0 396 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 IRAK3Q9Y616 596 aa16.34■□□□□ 0.21
LINC00643-206ENST00000623985 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.33■□□□□ 0.2
LINC00643-206ENST00000623985 TTLL13PA6NNM8 815 aa16.33■□□□□ 0.2
LINC00643-206ENST00000623985 EDN1P05305 212 aa16.33■□□□□ 0.2
LINC00643-206ENST00000623985 CA8P35219 290 aa16.33■□□□□ 0.2
LINC00643-206ENST00000623985 GRIK3Q13003 919 aa16.33■□□□□ 0.2
LINC00643-206ENST00000623985 MAPK7Q13164 816 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms