RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 VCX3BQ9H321 246 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 VCX3AQ9NNX9 186 aa17.01■□□□□ 0.31
SEMA3B-214ENST00000619119 HNRNPRO43390 633 aaKnown RBP17■□□□□ 0.31
SEMA3B-214ENST00000619119 SUN1O94901 812 aa17■□□□□ 0.31
SEMA3B-214ENST00000619119 BMP3P12645 472 aa17■□□□□ 0.31
SEMA3B-214ENST00000619119 EEF1GP26641 437 aaKnown RBP17■□□□□ 0.31
SEMA3B-214ENST00000619119 MTIF2P46199 727 aaKnown RBP17■□□□□ 0.31
SEMA3B-214ENST00000619119 IFI35P80217 286 aaPredicted RBP17■□□□□ 0.31
SEMA3B-214ENST00000619119 ZC3H18Q86VM9 953 aaKnown RBP17■□□□□ 0.31
SEMA3B-214ENST00000619119 USP38Q8NB14 1042 aa17■□□□□ 0.31
SEMA3B-214ENST00000619119 PIGOQ8TEQ8 1089 aa17■□□□□ 0.31
SEMA3B-214ENST00000619119 FAM151AQ8WW52 585 aa17■□□□□ 0.31
SEMA3B-214ENST00000619119 AZI2Q9H6S1 392 aa17■□□□□ 0.31
SEMA3B-214ENST00000619119 CYP39A1Q9NYL5 469 aa17■□□□□ 0.31
SEMA3B-214ENST00000619119 ZNF646O15015 1829 aaPredicted RBP17■□□□□ 0.31
SEMA3B-214ENST00000619119 WFS1O76024 890 aa17■□□□□ 0.31
SEMA3B-214ENST00000619119 GM2AP17900 193 aa17■□□□□ 0.31
SEMA3B-214ENST00000619119 SPDYE2Q495Y8 402 aa17■□□□□ 0.31
SEMA3B-214ENST00000619119 KIAA1755Q5JYT7 1200 aa17■□□□□ 0.31
SEMA3B-214ENST00000619119 ASRGL1Q7L266 308 aa17■□□□□ 0.31
SEMA3B-214ENST00000619119 PYM1Q9BRP8 204 aaKnown RBP17■□□□□ 0.31
SEMA3B-214ENST00000619119 ADAM7Q9H2U9 754 aa17■□□□□ 0.31
SEMA3B-214ENST00000619119 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 WNT10BO00744 389 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 SPATA31D3P0C874 917 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 FUT4P22083 530 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 PDE6CP51160 858 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 ZC2HC1CQ53FD0 456 aaPredicted RBP16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 SPATA31D4Q6ZUB0 917 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 TTC8Q8TAM2 541 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 FBXO41Q8TF61 875 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 RAB3IPQ96QF0 476 aaPredicted RBP16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 DDX25Q9UHL0 483 aaKnown RBP16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 CNTNAP1P78357 1384 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 TDRD12Q587J7 1177 aaKnown RBP16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 HOOK3Q86VS8 718 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 ASAP3Q8TDY4 903 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 TRIM7Q9C029 511 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 CCSER1Q9C0I3 900 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 KCNK3O14649 394 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 EPHB6O15197 1021 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 NVLO15381 856 aaKnown RBP16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 MYBP10242 640 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 HOXA13P31271 388 aaPredicted RBP16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 CCNFP41002 786 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 CIAPIN1Q6FI81 312 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 DPY19L2Q6NUT2 758 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 GBP7Q8N8V2 638 aaPredicted RBP16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 NUDT12Q9BQG2 462 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 GLIS2Q9BZE0 524 aaPredicted RBP16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 MLXIPLQ9NP71 852 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 INTUQ9ULD6 942 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 TMCO1Q9UM00 188 aa16.99■□□□□ 0.31
SEMA3B-214ENST00000619119 TCP11X1B4DZS4 312 aa16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 FAM83BQ5T0W9 1011 aa16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 SYDE2Q5VT97 1194 aa16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 ZNF365Q70YC5 407 aa16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 RNF168Q8IYW5 571 aaPredicted RBP16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 TAF4BQ92750 862 aa16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 RMDN2Q96LZ7 410 aa16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 TMEM237Q96Q45 408 aa16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 NMRK1Q9NWW6 199 aa16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 HERC5Q9UII4 1024 aaKnown RBP16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 GJA3Q9Y6H8 435 aa16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 GRID2IPA4D2P6 1211 aa16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 CEP104O60308 925 aa16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 ATP9AO75110 1047 aa16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 SLCO1A2P46721 670 aa16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 KIAA0753Q2KHM9 967 aa16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 P3H1Q32P28 736 aa16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 DDX27Q96GQ7 796 aaKnown RBP16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 MTMR9Q96QG7 549 aa16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 DDX50Q9BQ39 737 aaKnown RBP16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 NOC4LQ9BVI4 516 aaKnown RBP16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 ZBTB21Q9ULJ3 1066 aa16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 CHMP2BQ9UQN3 213 aa16.98■□□□□ 0.31
SEMA3B-214ENST00000619119 NKRFO15226 690 aaKnown RBP eCLIP16.97■□□□□ 0.319e-6■□□□□ 8.3
SEMA3B-214ENST00000619119 GNA14O95837 355 aa16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 GSTA2P09210 222 aa16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 MMP13P45452 471 aa16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 CLK2P49760 499 aaKnown RBP16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 CNPY1Q3B7I2 92 aa16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 RRAGAQ7L523 313 aa16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.97■□□□□ 0.314e-10■□□□□ 10
SEMA3B-214ENST00000619119 HPS3Q969F9 1004 aa16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 FAM136AQ96C01 138 aa16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 CDK5RAP3Q96JB5 506 aa16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 AMNQ9BXJ7 453 aa16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 GREB1LQ9C091 1923 aaPredicted RBP16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 NFKBIEO00221 500 aa16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 RGS16O15492 202 aaPredicted RBP16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 UBTFL6P0CB48 400 aaPredicted RBP16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 TMEM266Q2M3C6 531 aa16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 TCERG1LQ5VWI1 586 aa16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 PPP1R18Q6NYC8 613 aa16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 CCDC174Q6PII3 467 aa16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 FBXO11Q86XK2 927 aa16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 CSGALNACT2Q8N6G5 542 aa16.97■□□□□ 0.31
SEMA3B-214ENST00000619119 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.97■□□□□ 0.313e-6■■■■■ 50.8
SEMA3B-214ENST00000619119 CALML4Q96GE6 196 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms